RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 CDC42BPGQ6DT37 1551 aa31.34■■■□□ 2.61
CRNDE-205ENST00000558952 STAC3Q96MF2 364 aa31.34■■■□□ 2.61
CRNDE-205ENST00000558952 SHPRHQ149N8 1683 aa31.32■■■□□ 2.6
CRNDE-205ENST00000558952 PLEKHH1Q9ULM0 1364 aa31.3■■■□□ 2.6
CRNDE-205ENST00000558952 LRRC59Q96AG4 307 aaKnown RBP31.3■■■□□ 2.6
CRNDE-205ENST00000558952 SIRT1Q96EB6 747 aa31.3■■■□□ 2.6
CRNDE-205ENST00000558952 ORAI2Q96SN7 254 aa31.3■■■□□ 2.6
CRNDE-205ENST00000558952 DDX17Q92841 729 aaKnown RBP31.29■■■□□ 2.6
CRNDE-205ENST00000558952 MEX3CQ5U5Q3 659 aaKnown RBP31.27■■■□□ 2.6
CRNDE-205ENST00000558952 RGS17Q9UGC6 210 aaPredicted RBP31.27■■■□□ 2.6
CRNDE-205ENST00000558952 ESCO1Q5FWF5 840 aa31.25■■■□□ 2.59
CRNDE-205ENST00000558952 LRP6O75581 1613 aa31.23■■■□□ 2.59
CRNDE-205ENST00000558952 PRAM1Q96QH2 718 aa31.22■■■□□ 2.59
CRNDE-205ENST00000558952 NUTM2FA1L443 756 aa31.21■■■□□ 2.59
CRNDE-205ENST00000558952 NUTM2BA6NNL0 878 aaPredicted RBP31.21■■■□□ 2.59
CRNDE-205ENST00000558952 NUTM2EB1AL46 878 aaPredicted RBP31.21■■■□□ 2.59
CRNDE-205ENST00000558952 NUTM2AQ8IVF1 878 aaPredicted RBP31.21■■■□□ 2.59
CRNDE-205ENST00000558952 POGKQ9P215 609 aa31.21■■■□□ 2.59
CRNDE-205ENST00000558952 ADGRB1O14514 1584 aa31.21■■■□□ 2.59
CRNDE-205ENST00000558952 DLC1Q96QB1 1528 aa31.2■■■□□ 2.59
CRNDE-205ENST00000558952 SAFB2Q14151 953 aaKnown RBP eCLIP31.18■■■□□ 2.58
CRNDE-205ENST00000558952 SOS2Q07890 1332 aaPredicted RBP31.18■■■□□ 2.58
CRNDE-205ENST00000558952 NPHP3Q7Z494 1330 aa31.18■■■□□ 2.58
CRNDE-205ENST00000558952 TRAK1Q9UPV9 953 aa31.17■■■□□ 2.58
CRNDE-205ENST00000558952 FMN2Q9NZ56 1722 aa31.17■■■□□ 2.58
CRNDE-205ENST00000558952 PNPLA6Q8IY17 1366 aa31.17■■■□□ 2.58
CRNDE-205ENST00000558952 POTEAQ6S8J7 498 aa31.14■■■□□ 2.58
CRNDE-205ENST00000558952 FOXO3O43524 673 aa31.11■■■□□ 2.57
CRNDE-205ENST00000558952 ZNF772Q68DY9 489 aaPredicted RBP31.1■■■□□ 2.57
CRNDE-205ENST00000558952 KIF1AQ12756 1690 aa31.08■■■□□ 2.57
CRNDE-205ENST00000558952 PXDNQ92626 1479 aa31.06■■■□□ 2.56
CRNDE-205ENST00000558952 ADGRB2O60241 1585 aa31.05■■■□□ 2.56
CRNDE-205ENST00000558952 XPCQ01831 940 aaPredicted RBP31.05■■■□□ 2.56
CRNDE-205ENST00000558952 MINK1Q8N4C8 1332 aaPredicted RBP31.03■■■□□ 2.56
CRNDE-205ENST00000558952 HIRIP3Q9BW71 556 aaPredicted RBP31.03■■■□□ 2.56
CRNDE-205ENST00000558952 PHF8Q9UPP1 1060 aa31.03■■■□□ 2.56
CRNDE-205ENST00000558952 KIAA1210Q9ULL0 1709 aa31.02■■■□□ 2.56
CRNDE-205ENST00000558952 C8orf37Q96NL8 207 aa31.02■■■□□ 2.56
CRNDE-205ENST00000558952 ANKARQ7Z5J8 1434 aa31.01■■■□□ 2.55
CRNDE-205ENST00000558952 EIF3AQ14152 1382 aaKnown RBP31.01■■■□□ 2.55
CRNDE-205ENST00000558952 AFF2P51816 1311 aa30.99■■■□□ 2.55
CRNDE-205ENST00000558952 ADAMTS2O95450 1211 aa30.99■■■□□ 2.55
CRNDE-205ENST00000558952 TRIM26Q12899 539 aaPredicted RBP30.99■■■□□ 2.55
CRNDE-205ENST00000558952 COL22A1Q8NFW1 1626 aaPredicted RBP30.98■■■□□ 2.55
CRNDE-205ENST00000558952 ARHGEF28Q8N1W1 1705 aaKnown RBP30.98■■■□□ 2.55
CRNDE-205ENST00000558952 SIN3AQ96ST3 1273 aa30.98■■■□□ 2.55
CRNDE-205ENST00000558952 RGPD8O14715 1765 aaPredicted RBP30.97■■■□□ 2.55
CRNDE-205ENST00000558952 NEUROD1Q13562 356 aa30.97■■■□□ 2.55
CRNDE-205ENST00000558952 KRT28Q7Z3Y7 464 aa30.97■■■□□ 2.55
CRNDE-205ENST00000558952 L3MBTL2Q969R5 705 aa30.96■■■□□ 2.55
CRNDE-205ENST00000558952 WASLO00401 505 aaPredicted RBP30.95■■■□□ 2.55
CRNDE-205ENST00000558952 PSME1Q06323 249 aa30.95■■■□□ 2.55
CRNDE-205ENST00000558952 NGLY1Q96IV0 654 aa30.95■■■□□ 2.55
CRNDE-205ENST00000558952 USP32Q8NFA0 1604 aa30.93■■■□□ 2.54
CRNDE-205ENST00000558952 TULP4Q9NRJ4 1543 aa30.93■■■□□ 2.54
CRNDE-205ENST00000558952 NBPF1Q3BBV0 1214 aa30.92■■■□□ 2.54
CRNDE-205ENST00000558952 SPATA31A3Q5VYP0 1347 aa30.92■■■□□ 2.54
CRNDE-205ENST00000558952 PMFBP1Q8TBY8 1022 aa30.91■■■□□ 2.54
CRNDE-205ENST00000558952 RXRBP28702 533 aa30.9■■■□□ 2.54
CRNDE-205ENST00000558952 TNS3Q68CZ2 1445 aa30.88■■■□□ 2.53
CRNDE-205ENST00000558952 PRR36Q9H6K5 1346 aa30.86■■■□□ 2.53
CRNDE-205ENST00000558952 SBNO1A3KN83 1393 aa30.86■■■□□ 2.53
CRNDE-205ENST00000558952 LMOD2Q6P5Q4 547 aa30.84■■■□□ 2.53
CRNDE-205ENST00000558952 QTRT2Q9H974 415 aaKnown RBP30.84■■■□□ 2.53
CRNDE-205ENST00000558952 GPRASP1Q5JY77 1395 aa30.83■■■□□ 2.53
CRNDE-205ENST00000558952 USP21Q9UK80 565 aa30.83■■■□□ 2.53
CRNDE-205ENST00000558952 HAP1P54257 671 aaPredicted RBP30.82■■■□□ 2.52
CRNDE-205ENST00000558952 ARHGEF10O15013 1369 aa30.81■■■□□ 2.52
CRNDE-205ENST00000558952 NGDNQ8NEJ9 315 aaKnown RBP30.81■■■□□ 2.52
CRNDE-205ENST00000558952 CDK19Q9BWU1 502 aa30.81■■■□□ 2.52
CRNDE-205ENST00000558952 CENPJQ9HC77 1338 aaPredicted RBP30.8■■■□□ 2.52
CRNDE-205ENST00000558952 FNBP4Q8N3X1 1017 aaPredicted RBP30.8■■■□□ 2.52
CRNDE-205ENST00000558952 NUDT16Q96DE0 195 aaKnown RBP30.8■■■□□ 2.52
CRNDE-205ENST00000558952 ATP7BP35670 1465 aa30.79■■■□□ 2.52
CRNDE-205ENST00000558952 RBM6P78332 1123 aaKnown RBP30.79■■■□□ 2.52
CRNDE-205ENST00000558952 ITSN1Q15811 1721 aa30.78■■■□□ 2.52
CRNDE-205ENST00000558952 CDK12Q9NYV4 1490 aaPredicted RBP30.78■■■□□ 2.52
CRNDE-205ENST00000558952 MARF1Q9Y4F3 1742 aaKnown RBP30.78■■■□□ 2.52
CRNDE-205ENST00000558952 TRPM1Q7Z4N2 1603 aa30.77■■■□□ 2.52
CRNDE-205ENST00000558952 PLEKHG5O94827 1062 aa30.76■■■□□ 2.51
CRNDE-205ENST00000558952 TRPC5Q9UL62 973 aaPredicted RBP30.76■■■□□ 2.51
CRNDE-205ENST00000558952 ROCK2O75116 1388 aaKnown RBP30.76■■■□□ 2.51
CRNDE-205ENST00000558952 TONSLQ96HA7 1378 aa30.73■■■□□ 2.51
CRNDE-205ENST00000558952 CABLES1Q8TDN4 633 aa30.72■■■□□ 2.51
CRNDE-205ENST00000558952 TRPM3Q9HCF6 1732 aaPredicted RBP30.72■■■□□ 2.51
CRNDE-205ENST00000558952 PAK3O75914 559 aaPredicted RBP30.71■■■□□ 2.51
CRNDE-205ENST00000558952 SRPK2P78362 688 aaKnown RBP30.71■■■□□ 2.51
CRNDE-205ENST00000558952 CCDC61Q9Y6R9 512 aa30.71■■■□□ 2.51
CRNDE-205ENST00000558952 QRICH2Q9H0J4 1663 aa30.71■■■□□ 2.51
CRNDE-205ENST00000558952 ATRNO75882 1429 aa30.68■■■□□ 2.5
CRNDE-205ENST00000558952 BCL9LQ86UU0 1499 aa30.68■■■□□ 2.5
CRNDE-205ENST00000558952 RGS12O14924 1447 aa30.67■■■□□ 2.5
CRNDE-205ENST00000558952 TOPAZ1Q8N9V7 1692 aa30.67■■■□□ 2.5
CRNDE-205ENST00000558952 ALS2Q96Q42 1657 aa30.66■■■□□ 2.5
CRNDE-205ENST00000558952 ABCA3Q99758 1704 aa30.65■■■□□ 2.5
CRNDE-205ENST00000558952 NBPF8Q3BBV2 869 aa30.65■■■□□ 2.5
CRNDE-205ENST00000558952 CABP2Q9NPB3 220 aa30.64■■■□□ 2.5
CRNDE-205ENST00000558952 ACEP12821 1306 aa30.64■■■□□ 2.5
CRNDE-205ENST00000558952 POLR3AO14802 1390 aaPredicted RBP30.64■■■□□ 2.5
CRNDE-205ENST00000558952 SLIT2O94813 1529 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms