RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 PHLPP1O60346 1717 aa18.45■□□□□ 0.54
RABGGTA-207ENST00000558936 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
RABGGTA-207ENST00000558936 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
RABGGTA-207ENST00000558936 CDC42BPGQ6DT37 1551 aa18.44■□□□□ 0.54
RABGGTA-207ENST00000558936 NEUROD1Q13562 356 aa18.44■□□□□ 0.54
RABGGTA-207ENST00000558936 NBPF8Q3BBV2 869 aa18.44■□□□□ 0.54
RABGGTA-207ENST00000558936 SIRT1Q96EB6 747 aa18.44■□□□□ 0.54
RABGGTA-207ENST00000558936 PCGF6Q9BYE7 350 aa18.44■□□□□ 0.54
RABGGTA-207ENST00000558936 ATF3P18847 181 aa18.43■□□□□ 0.54
RABGGTA-207ENST00000558936 ORAI2Q96SN7 254 aa18.43■□□□□ 0.54
RABGGTA-207ENST00000558936 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
RABGGTA-207ENST00000558936 USP32Q8NFA0 1604 aa18.42■□□□□ 0.54
RABGGTA-207ENST00000558936 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
RABGGTA-207ENST00000558936 PRAM1Q96QH2 718 aa18.41■□□□□ 0.54
RABGGTA-207ENST00000558936 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
RABGGTA-207ENST00000558936 MED1Q15648 1581 aaPredicted RBP18.4■□□□□ 0.54
RABGGTA-207ENST00000558936 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
RABGGTA-207ENST00000558936 SAFB2Q14151 953 aaKnown RBP eCLIP18.38■□□□□ 0.53
RABGGTA-207ENST00000558936 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
RABGGTA-207ENST00000558936 NUTM2FA1L443 756 aa18.36■□□□□ 0.53
RABGGTA-207ENST00000558936 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
RABGGTA-207ENST00000558936 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
RABGGTA-207ENST00000558936 RGS17Q9UGC6 210 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-207ENST00000558936 LRP6O75581 1613 aa18.34■□□□□ 0.53
RABGGTA-207ENST00000558936 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-207ENST00000558936 DISP3Q9P2K9 1392 aa18.32■□□□□ 0.52
RABGGTA-207ENST00000558936 SHPRHQ149N8 1683 aa18.32■□□□□ 0.52
RABGGTA-207ENST00000558936 PXDNQ92626 1479 aa18.32■□□□□ 0.52
RABGGTA-207ENST00000558936 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
RABGGTA-207ENST00000558936 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-207ENST00000558936 ESCO1Q5FWF5 840 aa18.27■□□□□ 0.52
RABGGTA-207ENST00000558936 GPRASP1Q5JY77 1395 aa18.27■□□□□ 0.51
RABGGTA-207ENST00000558936 JCADQ9P266 1359 aa18.27■□□□□ 0.51
RABGGTA-207ENST00000558936 XPCQ01831 940 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-207ENST00000558936 POGKQ9P215 609 aa18.26■□□□□ 0.51
RABGGTA-207ENST00000558936 PNPLA6Q8IY17 1366 aa18.26■□□□□ 0.51
RABGGTA-207ENST00000558936 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
RABGGTA-207ENST00000558936 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-207ENST00000558936 FOXO3O43524 673 aa18.25■□□□□ 0.51
RABGGTA-207ENST00000558936 ATP7BP35670 1465 aa18.25■□□□□ 0.51
RABGGTA-207ENST00000558936 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
RABGGTA-207ENST00000558936 TOPAZ1Q8N9V7 1692 aa18.24■□□□□ 0.51
RABGGTA-207ENST00000558936 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-207ENST00000558936 KIF1AQ12756 1690 aa18.22■□□□□ 0.51
RABGGTA-207ENST00000558936 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
RABGGTA-207ENST00000558936 COL22A1Q8NFW1 1626 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-207ENST00000558936 ANKARQ7Z5J8 1434 aa18.21■□□□□ 0.51
RABGGTA-207ENST00000558936 TONSLQ96HA7 1378 aa18.2■□□□□ 0.5
RABGGTA-207ENST00000558936 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
RABGGTA-207ENST00000558936 CDK19Q9BWU1 502 aa18.2■□□□□ 0.5
RABGGTA-207ENST00000558936 ROCK2O75116 1388 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-207ENST00000558936 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
RABGGTA-207ENST00000558936 LRRC59Q96AG4 307 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-207ENST00000558936 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-207ENST00000558936 POTEAQ6S8J7 498 aa18.17■□□□□ 0.5
RABGGTA-207ENST00000558936 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-207ENST00000558936 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
RABGGTA-207ENST00000558936 SPATA31A6Q5VVP1 1343 aa18.16■□□□□ 0.5
RABGGTA-207ENST00000558936 NPHP3Q7Z494 1330 aa18.16■□□□□ 0.5
RABGGTA-207ENST00000558936 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
RABGGTA-207ENST00000558936 SPATA31A3Q5VYP0 1347 aa18.15■□□□□ 0.5
RABGGTA-207ENST00000558936 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
RABGGTA-207ENST00000558936 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
RABGGTA-207ENST00000558936 ABCA3Q99758 1704 aa18.14■□□□□ 0.49
RABGGTA-207ENST00000558936 ITSN1Q15811 1721 aa18.13■□□□□ 0.49
RABGGTA-207ENST00000558936 NUTM2BA6NNL0 878 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-207ENST00000558936 NUTM2EB1AL46 878 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-207ENST00000558936 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-207ENST00000558936 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
RABGGTA-207ENST00000558936 TESK2Q96S53 571 aa18.11■□□□□ 0.49
RABGGTA-207ENST00000558936 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
RABGGTA-207ENST00000558936 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
RABGGTA-207ENST00000558936 MARF1Q9Y4F3 1742 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-207ENST00000558936 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
RABGGTA-207ENST00000558936 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
RABGGTA-207ENST00000558936 SBNO1A3KN83 1393 aa18.09■□□□□ 0.49
RABGGTA-207ENST00000558936 PLEKHG3A1L390 1219 aa18.09■□□□□ 0.49
RABGGTA-207ENST00000558936 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
RABGGTA-207ENST00000558936 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
RABGGTA-207ENST00000558936 ACEP12821 1306 aa18.07■□□□□ 0.48
RABGGTA-207ENST00000558936 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
RABGGTA-207ENST00000558936 PPIP5K1Q6PFW1 1433 aa18.06■□□□□ 0.48
RABGGTA-207ENST00000558936 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
RABGGTA-207ENST00000558936 ADAMTS2O95450 1211 aa18.05■□□□□ 0.48
RABGGTA-207ENST00000558936 CD163L1Q9NR16 1453 aa18.05■□□□□ 0.48
RABGGTA-207ENST00000558936 EIF3AQ14152 1382 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-207ENST00000558936 AKAP12Q02952 1782 aa18.04■□□□□ 0.48
RABGGTA-207ENST00000558936 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
RABGGTA-207ENST00000558936 PSME1Q06323 249 aa18.04■□□□□ 0.48
RABGGTA-207ENST00000558936 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-207ENST00000558936 CABP1Q9NZU7 370 aa18.04■□□□□ 0.48
RABGGTA-207ENST00000558936 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-207ENST00000558936 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
RABGGTA-207ENST00000558936 AFF2P51816 1311 aa18.02■□□□□ 0.48
RABGGTA-207ENST00000558936 BCL9LQ86UU0 1499 aa18.02■□□□□ 0.48
RABGGTA-207ENST00000558936 NGDNQ8NEJ9 315 aaKnown RBP18.01■□□□□ 0.47
RABGGTA-207ENST00000558936 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
RABGGTA-207ENST00000558936 NRKQ7Z2Y5 1582 aa18■□□□□ 0.47
RABGGTA-207ENST00000558936 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
RABGGTA-207ENST00000558936 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms