RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 NALCNQ8IZF0 1738 aa34.57■■■■□ 3.12
ZEB1-214ENST00000558863 CADPS2Q86UW7 1296 aa34.56■■■■□ 3.12
ZEB1-214ENST00000558863 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.56■■■■□ 3.12
ZEB1-214ENST00000558863 TOM1O60784 492 aa34.55■■■■□ 3.12
ZEB1-214ENST00000558863 ATF3P18847 181 aa34.55■■■■□ 3.12
ZEB1-214ENST00000558863 CENPJQ9HC77 1338 aaPredicted RBP34.52■■■■□ 3.12
ZEB1-214ENST00000558863 CDC42BPGQ6DT37 1551 aa34.51■■■■□ 3.12
ZEB1-214ENST00000558863 UBAP1LF5GYI3 381 aa34.5■■■■□ 3.11
ZEB1-214ENST00000558863 SAFB2Q14151 953 aaKnown RBP eCLIP34.5■■■■□ 3.11
ZEB1-214ENST00000558863 ADGRB2O60241 1585 aa34.48■■■■□ 3.11
ZEB1-214ENST00000558863 QRICH2Q9H0J4 1663 aa34.44■■■■□ 3.1
ZEB1-214ENST00000558863 MINK1Q8N4C8 1332 aaPredicted RBP34.43■■■■□ 3.1
ZEB1-214ENST00000558863 USP47Q96K76 1375 aa34.42■■■■□ 3.1
ZEB1-214ENST00000558863 ZEB1P37275 1124 aaPredicted RBP34.41■■■■□ 3.1
ZEB1-214ENST00000558863 SLAIN2Q9P270 581 aa34.41■■■■□ 3.1
ZEB1-214ENST00000558863 SBNO2Q9Y2G9 1366 aa34.41■■■■□ 3.1
ZEB1-214ENST00000558863 FBXO41Q8TF61 875 aa34.4■■■■□ 3.1
ZEB1-214ENST00000558863 SLC24A1O60721 1099 aa34.39■■■■□ 3.1
ZEB1-214ENST00000558863 MST1RQ04912 1400 aa34.38■■■■□ 3.09
ZEB1-214ENST00000558863 WASLO00401 505 aaPredicted RBP34.36■■■■□ 3.09
ZEB1-214ENST00000558863 HIRIP3Q9BW71 556 aaPredicted RBP34.36■■■■□ 3.09
ZEB1-214ENST00000558863 FMN2Q9NZ56 1722 aa34.36■■■■□ 3.09
ZEB1-214ENST00000558863 C1orf167Q5SNV9 1468 aa34.32■■■■□ 3.08
ZEB1-214ENST00000558863 ST20-MTHFSA0A0A6YYL1 179 aa34.32■■■■□ 3.08
ZEB1-214ENST00000558863 ANKARQ7Z5J8 1434 aa34.31■■■■□ 3.08
ZEB1-214ENST00000558863 EIF4G2P78344 907 aaKnown RBP eCLIP34.31■■■■□ 3.08
ZEB1-214ENST00000558863 PIP4K2BP78356 416 aa34.31■■■■□ 3.08
ZEB1-214ENST00000558863 EVC2Q86UK5 1308 aa34.31■■■■□ 3.08
ZEB1-214ENST00000558863 TULP4Q9NRJ4 1543 aa34.3■■■■□ 3.08
ZEB1-214ENST00000558863 SCAF1Q9H7N4 1312 aaKnown RBP34.29■■■■□ 3.08
ZEB1-214ENST00000558863 CDK19Q9BWU1 502 aa34.27■■■■□ 3.08
ZEB1-214ENST00000558863 ROBO1Q9Y6N7 1651 aa34.25■■■■□ 3.07
ZEB1-214ENST00000558863 TESK2Q96S53 571 aa34.24■■■■□ 3.07
ZEB1-214ENST00000558863 NUTM2FA1L443 756 aa34.22■■■■□ 3.07
ZEB1-214ENST00000558863 SRPK2P78362 688 aaKnown RBP34.22■■■■□ 3.07
ZEB1-214ENST00000558863 BRINP3Q76B58 766 aa34.22■■■■□ 3.07
ZEB1-214ENST00000558863 ESCO1Q5FWF5 840 aa34.2■■■■□ 3.07
ZEB1-214ENST00000558863 USP32Q8NFA0 1604 aa34.2■■■■□ 3.06
ZEB1-214ENST00000558863 ATP7BP35670 1465 aa34.19■■■■□ 3.06
ZEB1-214ENST00000558863 HSPA5P11021 654 aaKnown RBP34.18■■■■□ 3.06
ZEB1-214ENST00000558863 NUDT16Q96DE0 195 aaKnown RBP34.18■■■■□ 3.06
ZEB1-214ENST00000558863 PUS7Q96PZ0 661 aaKnown RBP34.18■■■■□ 3.06
ZEB1-214ENST00000558863 ITSN1Q15811 1721 aa34.17■■■■□ 3.06
ZEB1-214ENST00000558863 TMF1P82094 1093 aa34.17■■■■□ 3.06
ZEB1-214ENST00000558863 KIF1AQ12756 1690 aa34.16■■■■□ 3.06
ZEB1-214ENST00000558863 ORAI2Q96SN7 254 aa34.16■■■■□ 3.06
ZEB1-214ENST00000558863 PRR36Q9H6K5 1346 aa34.16■■■■□ 3.06
ZEB1-214ENST00000558863 CCDC61Q9Y6R9 512 aa34.15■■■■□ 3.06
ZEB1-214ENST00000558863 ATAD2Q6PL18 1390 aa34.14■■■■□ 3.06
ZEB1-214ENST00000558863 CABP2Q9NPB3 220 aa34.14■■■■□ 3.06
ZEB1-214ENST00000558863 RGPD8O14715 1765 aaPredicted RBP34.14■■■■□ 3.06
ZEB1-214ENST00000558863 CDCA8Q53HL2 280 aa34.13■■■■□ 3.05
ZEB1-214ENST00000558863 PHF8Q9UPP1 1060 aa34.12■■■■□ 3.05
ZEB1-214ENST00000558863 AHDC1Q5TGY3 1603 aaPredicted RBP34.11■■■■□ 3.05
ZEB1-214ENST00000558863 TOPAZ1Q8N9V7 1692 aa34.11■■■■□ 3.05
ZEB1-214ENST00000558863 NHSL1Q5SYE7 1610 aa34.09■■■■□ 3.05
ZEB1-214ENST00000558863 NPHP3Q7Z494 1330 aa34.09■■■■□ 3.05
ZEB1-214ENST00000558863 PLEKHG3A1L390 1219 aa34.05■■■■□ 3.04
ZEB1-214ENST00000558863 PPIP5K1Q6PFW1 1433 aa34.05■■■■□ 3.04
ZEB1-214ENST00000558863 DISP3Q9P2K9 1392 aa34.05■■■■□ 3.04
ZEB1-214ENST00000558863 PHLPP1O60346 1717 aa34.04■■■■□ 3.04
ZEB1-214ENST00000558863 FOXO3O43524 673 aa34.02■■■■□ 3.04
ZEB1-214ENST00000558863 NINLQ9Y2I6 1382 aa34.02■■■■□ 3.04
ZEB1-214ENST00000558863 HSPA1LP34931 641 aa34.01■■■■□ 3.04
ZEB1-214ENST00000558863 NGDNQ8NEJ9 315 aaKnown RBP34.01■■■■□ 3.04
ZEB1-214ENST00000558863 PMFBP1Q8TBY8 1022 aa34.01■■■■□ 3.04
ZEB1-214ENST00000558863 POLR3AO14802 1390 aaPredicted RBP34■■■■□ 3.03
ZEB1-214ENST00000558863 ILDR1Q86SU0 546 aaPredicted RBP33.99■■■■□ 3.03
ZEB1-214ENST00000558863 SOS2Q07890 1332 aaPredicted RBP33.99■■■■□ 3.03
ZEB1-214ENST00000558863 CABP1Q9NZU7 370 aa33.98■■■■□ 3.03
ZEB1-214ENST00000558863 PSME1Q06323 249 aa33.97■■■■□ 3.03
ZEB1-214ENST00000558863 COL16A1Q07092 1604 aaPredicted RBP33.96■■■■□ 3.03
ZEB1-214ENST00000558863 PXDNQ92626 1479 aa33.95■■■■□ 3.03
ZEB1-214ENST00000558863 ACEP12821 1306 aa33.95■■■■□ 3.03
ZEB1-214ENST00000558863 DDX17Q92841 729 aaKnown RBP33.95■■■■□ 3.02
ZEB1-214ENST00000558863 KRT28Q7Z3Y7 464 aa33.93■■■■□ 3.02
ZEB1-214ENST00000558863 LRRC59Q96AG4 307 aaKnown RBP33.93■■■■□ 3.02
ZEB1-214ENST00000558863 BRD4O60885 1362 aaPredicted RBP33.91■■■■□ 3.02
ZEB1-214ENST00000558863 TMC1Q8TDI8 760 aa33.91■■■■□ 3.02
ZEB1-214ENST00000558863 ZNF692Q9BU19 519 aaPredicted RBP33.91■■■■□ 3.02
ZEB1-214ENST00000558863 SBNO1A3KN83 1393 aa33.89■■■■□ 3.02
ZEB1-214ENST00000558863 TERF2IPQ9NYB0 399 aa33.88■■■■□ 3.01
ZEB1-214ENST00000558863 CPSF1Q10570 1443 aaKnown RBP33.87■■■■□ 3.01
ZEB1-214ENST00000558863 XPCQ01831 940 aaPredicted RBP33.86■■■■□ 3.01
ZEB1-214ENST00000558863 HDGFL2Q7Z4V5 671 aaPredicted RBP33.86■■■■□ 3.01
ZEB1-214ENST00000558863 SLC12A5Q9H2X9 1139 aa33.86■■■■□ 3.01
ZEB1-214ENST00000558863 JCADQ9P266 1359 aa33.85■■■■□ 3.01
ZEB1-214ENST00000558863 AKAP12Q02952 1782 aa33.84■■■■□ 3.01
ZEB1-214ENST00000558863 USP6P35125 1406 aa33.83■■■■□ 3.01
ZEB1-214ENST00000558863 TRPM3Q9HCF6 1732 aaPredicted RBP33.82■■■■□ 3.01
ZEB1-214ENST00000558863 SPATA31A3Q5VYP0 1347 aa33.82■■■■□ 3
ZEB1-214ENST00000558863 TNS3Q68CZ2 1445 aa33.82■■■■□ 3
ZEB1-214ENST00000558863 C11orf95C9JLR9 678 aaPredicted RBP33.81■■■■□ 3
ZEB1-214ENST00000558863 POLR3GLQ9BT43 218 aa33.81■■■■□ 3
ZEB1-214ENST00000558863 CD163L1Q9NR16 1453 aa33.8■■■■□ 3
ZEB1-214ENST00000558863 ARHGEF10O15013 1369 aa33.8■■■■□ 3
ZEB1-214ENST00000558863 KTN1Q86UP2 1357 aaKnown RBP33.8■■■■□ 3
ZEB1-214ENST00000558863 ANKRD36BQ8N2N9 1353 aa33.8■■■■□ 3
ZEB1-214ENST00000558863 MYOM1P52179 1685 aa33.8■■■■□ 3
ZEB1-214ENST00000558863 SHPRHQ149N8 1683 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms