RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
SPG11-207ENST00000558138 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
SPG11-207ENST00000558138 PHLPP1O60346 1717 aa12.82□□□□□ -0.36
SPG11-207ENST00000558138 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
SPG11-207ENST00000558138 MST1RQ04912 1400 aa12.82□□□□□ -0.36
SPG11-207ENST00000558138 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
SPG11-207ENST00000558138 DLC1Q96QB1 1528 aa12.82□□□□□ -0.36
SPG11-207ENST00000558138 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
SPG11-207ENST00000558138 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
SPG11-207ENST00000558138 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
SPG11-207ENST00000558138 ESCO1Q5FWF5 840 aa12.8□□□□□ -0.36
SPG11-207ENST00000558138 BRINP3Q76B58 766 aa12.8□□□□□ -0.36
SPG11-207ENST00000558138 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
SPG11-207ENST00000558138 C1orf167Q5SNV9 1468 aa12.79□□□□□ -0.36
SPG11-207ENST00000558138 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
SPG11-207ENST00000558138 TRPM1Q7Z4N2 1603 aa12.77□□□□□ -0.36
SPG11-207ENST00000558138 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
SPG11-207ENST00000558138 CLSPNQ9HAW4 1339 aa12.77□□□□□ -0.37
SPG11-207ENST00000558138 EIF3AQ14152 1382 aaKnown RBP12.77□□□□□ -0.37
SPG11-207ENST00000558138 DDX17Q92841 729 aaKnown RBP12.76□□□□□ -0.37
SPG11-207ENST00000558138 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
SPG11-207ENST00000558138 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
SPG11-207ENST00000558138 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
SPG11-207ENST00000558138 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
SPG11-207ENST00000558138 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
SPG11-207ENST00000558138 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
SPG11-207ENST00000558138 JCADQ9P266 1359 aa12.74□□□□□ -0.37
SPG11-207ENST00000558138 NBPF8Q3BBV2 869 aa12.74□□□□□ -0.37
SPG11-207ENST00000558138 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
SPG11-207ENST00000558138 WASLO00401 505 aaPredicted RBP12.73□□□□□ -0.37
SPG11-207ENST00000558138 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
SPG11-207ENST00000558138 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
SPG11-207ENST00000558138 NHSL1Q5SYE7 1610 aa12.73□□□□□ -0.37
SPG11-207ENST00000558138 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
SPG11-207ENST00000558138 FOXO3O43524 673 aa12.72□□□□□ -0.37
SPG11-207ENST00000558138 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
SPG11-207ENST00000558138 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
SPG11-207ENST00000558138 LRRC59Q96AG4 307 aaKnown RBP12.72□□□□□ -0.37
SPG11-207ENST00000558138 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
SPG11-207ENST00000558138 RALGAPBQ86X10 1494 aa12.72□□□□□ -0.37
SPG11-207ENST00000558138 KIF1AQ12756 1690 aa12.71□□□□□ -0.37
SPG11-207ENST00000558138 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.37
SPG11-207ENST00000558138 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.37
SPG11-207ENST00000558138 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.37
SPG11-207ENST00000558138 PMFBP1Q8TBY8 1022 aa12.71□□□□□ -0.37
SPG11-207ENST00000558138 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
SPG11-207ENST00000558138 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.37
SPG11-207ENST00000558138 MED1Q15648 1581 aaPredicted RBP12.71□□□□□ -0.37
SPG11-207ENST00000558138 ANKARQ7Z5J8 1434 aa12.71□□□□□ -0.38
SPG11-207ENST00000558138 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
SPG11-207ENST00000558138 RGPD8O14715 1765 aaPredicted RBP12.7□□□□□ -0.38
SPG11-207ENST00000558138 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
SPG11-207ENST00000558138 PSME1Q06323 249 aa12.69□□□□□ -0.38
SPG11-207ENST00000558138 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
SPG11-207ENST00000558138 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
SPG11-207ENST00000558138 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
SPG11-207ENST00000558138 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
SPG11-207ENST00000558138 ITSN1Q15811 1721 aa12.68□□□□□ -0.38
SPG11-207ENST00000558138 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
SPG11-207ENST00000558138 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
SPG11-207ENST00000558138 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
SPG11-207ENST00000558138 NUDT16Q96DE0 195 aaKnown RBP12.67□□□□□ -0.38
SPG11-207ENST00000558138 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
SPG11-207ENST00000558138 GPRASP1Q5JY77 1395 aa12.67□□□□□ -0.38
SPG11-207ENST00000558138 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
SPG11-207ENST00000558138 SOS2Q07890 1332 aaPredicted RBP12.66□□□□□ -0.38
SPG11-207ENST00000558138 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
SPG11-207ENST00000558138 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
SPG11-207ENST00000558138 PRR36Q9H6K5 1346 aa12.65□□□□□ -0.38
SPG11-207ENST00000558138 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
SPG11-207ENST00000558138 PNPLA6Q8IY17 1366 aa12.64□□□□□ -0.39
SPG11-207ENST00000558138 ATP7BP35670 1465 aa12.64□□□□□ -0.39
SPG11-207ENST00000558138 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
SPG11-207ENST00000558138 PXDNQ92626 1479 aa12.63□□□□□ -0.39
SPG11-207ENST00000558138 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
SPG11-207ENST00000558138 USP47Q96K76 1375 aa12.62□□□□□ -0.39
SPG11-207ENST00000558138 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
SPG11-207ENST00000558138 ST20-MTHFSA0A0A6YYL1 179 aa12.61□□□□□ -0.39
SPG11-207ENST00000558138 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
SPG11-207ENST00000558138 ARHGEF10O15013 1369 aa12.6□□□□□ -0.39
SPG11-207ENST00000558138 LRP6O75581 1613 aa12.6□□□□□ -0.39
SPG11-207ENST00000558138 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
SPG11-207ENST00000558138 TOPAZ1Q8N9V7 1692 aa12.6□□□□□ -0.39
SPG11-207ENST00000558138 ACEP12821 1306 aa12.6□□□□□ -0.39
SPG11-207ENST00000558138 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
SPG11-207ENST00000558138 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
SPG11-207ENST00000558138 ATAD2Q6PL18 1390 aa12.59□□□□□ -0.39
SPG11-207ENST00000558138 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
SPG11-207ENST00000558138 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
SPG11-207ENST00000558138 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
SPG11-207ENST00000558138 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
SPG11-207ENST00000558138 TMF1P82094 1093 aa12.57□□□□□ -0.4
SPG11-207ENST00000558138 COL22A1Q8NFW1 1626 aaPredicted RBP12.57□□□□□ -0.4
SPG11-207ENST00000558138 PLEKHG3A1L390 1219 aa12.56□□□□□ -0.4
SPG11-207ENST00000558138 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
SPG11-207ENST00000558138 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
SPG11-207ENST00000558138 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
SPG11-207ENST00000558138 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
SPG11-207ENST00000558138 HDGFL2Q7Z4V5 671 aaPredicted RBP12.55□□□□□ -0.4
SPG11-207ENST00000558138 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms