RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-211	ENST00000557446	SIRT1	Q96EB6	747 aa		28.54	■■■□□ 2.16
HIF1A-211	ENST00000557446	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.53	■■■□□ 2.16
HIF1A-211	ENST00000557446	COL16A1	Q07092	1604 aa	Predicted RBP	28.53	■■■□□ 2.16
HIF1A-211	ENST00000557446	BRINP3	Q76B58	766 aa		28.52	■■■□□ 2.16
HIF1A-211	ENST00000557446	C1orf167	Q5SNV9	1468 aa		28.52	■■■□□ 2.16
HIF1A-211	ENST00000557446	FMN2	Q9NZ56	1722 aa		28.52	■■■□□ 2.16
HIF1A-211	ENST00000557446	NHSL1	Q5SYE7	1610 aa		28.51	■■■□□ 2.15
HIF1A-211	ENST00000557446	PRAM1	Q96QH2	718 aa		28.5	■■■□□ 2.15
HIF1A-211	ENST00000557446	TRAK1	Q9UPV9	953 aa		28.5	■■■□□ 2.15
HIF1A-211	ENST00000557446	MED1	Q15648	1581 aa	Predicted RBP	28.48	■■■□□ 2.15
HIF1A-211	ENST00000557446	TRPM1	Q7Z4N2	1603 aa		28.47	■■■□□ 2.15
HIF1A-211	ENST00000557446	ADGRB2	O60241	1585 aa		28.46	■■■□□ 2.15
HIF1A-211	ENST00000557446	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.46	■■■□□ 2.15
HIF1A-211	ENST00000557446	POGK	Q9P215	609 aa		28.46	■■■□□ 2.15
HIF1A-211	ENST00000557446	TONSL	Q96HA7	1378 aa		28.44	■■■□□ 2.14
HIF1A-211	ENST00000557446	NBPF1	Q3BBV0	1214 aa		28.41	■■■□□ 2.14
HIF1A-211	ENST00000557446	RGPD8	O14715	1765 aa	Predicted RBP	28.39	■■■□□ 2.14
HIF1A-211	ENST00000557446	DISP3	Q9P2K9	1392 aa		28.39	■■■□□ 2.14
HIF1A-211	ENST00000557446	ORAI2	Q96SN7	254 aa		28.39	■■■□□ 2.14
HIF1A-211	ENST00000557446	NUTM2F	A1L443	756 aa		28.38	■■■□□ 2.13
HIF1A-211	ENST00000557446	SHPRH	Q149N8	1683 aa		28.38	■■■□□ 2.13
HIF1A-211	ENST00000557446	JCAD	Q9P266	1359 aa		28.37	■■■□□ 2.13
HIF1A-211	ENST00000557446	KIF1A	Q12756	1690 aa		28.36	■■■□□ 2.13
HIF1A-211	ENST00000557446	DDX17	Q92841	729 aa	Known RBP	28.35	■■■□□ 2.13
HIF1A-211	ENST00000557446	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.35	■■■□□ 2.13
HIF1A-211	ENST00000557446	USP32	Q8NFA0	1604 aa		28.34	■■■□□ 2.13
HIF1A-211	ENST00000557446	ESCO1	Q5FWF5	840 aa		28.34	■■■□□ 2.13
HIF1A-211	ENST00000557446	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.33	■■■□□ 2.13
HIF1A-211	ENST00000557446	ROCK2	O75116	1388 aa	Known RBP	28.32	■■■□□ 2.12
HIF1A-211	ENST00000557446	NBPF8	Q3BBV2	869 aa		28.31	■■■□□ 2.12
HIF1A-211	ENST00000557446	QRICH2	Q9H0J4	1663 aa		28.31	■■■□□ 2.12
HIF1A-211	ENST00000557446	ANKAR	Q7Z5J8	1434 aa		28.3	■■■□□ 2.12
HIF1A-211	ENST00000557446	TULP4	Q9NRJ4	1543 aa		28.29	■■■□□ 2.12
HIF1A-211	ENST00000557446	EIF3A	Q14152	1382 aa	Known RBP	28.28	■■■□□ 2.12
HIF1A-211	ENST00000557446	SOS2	Q07890	1332 aa	Predicted RBP	28.26	■■■□□ 2.11
HIF1A-211	ENST00000557446	NPHP3	Q7Z494	1330 aa		28.26	■■■□□ 2.11
HIF1A-211	ENST00000557446	CLSPN	Q9HAW4	1339 aa		28.26	■■■□□ 2.11
HIF1A-211	ENST00000557446	RALGAPB	Q86X10	1494 aa		28.26	■■■□□ 2.11
HIF1A-211	ENST00000557446	WASL	O00401	505 aa	Predicted RBP	28.25	■■■□□ 2.11
HIF1A-211	ENST00000557446	ITSN1	Q15811	1721 aa		28.24	■■■□□ 2.11
HIF1A-211	ENST00000557446	PXDN	Q92626	1479 aa		28.24	■■■□□ 2.11
HIF1A-211	ENST00000557446	LRRC59	Q96AG4	307 aa	Known RBP	28.24	■■■□□ 2.11
HIF1A-211	ENST00000557446	GPRASP1	Q5JY77	1395 aa		28.24	■■■□□ 2.11
HIF1A-211	ENST00000557446	SPATA31A6	Q5VVP1	1343 aa		28.23	■■■□□ 2.11
HIF1A-211	ENST00000557446	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.23	■■■□□ 2.11
HIF1A-211	ENST00000557446	LRP6	O75581	1613 aa		28.22	■■■□□ 2.11
HIF1A-211	ENST00000557446	FOXO3	O43524	673 aa		28.22	■■■□□ 2.11
HIF1A-211	ENST00000557446	PHF23	Q9BUL5	403 aa	Predicted RBP	28.22	■■■□□ 2.11
HIF1A-211	ENST00000557446	PHF8	Q9UPP1	1060 aa		28.21	■■■□□ 2.11
HIF1A-211	ENST00000557446	PNPLA6	Q8IY17	1366 aa		28.21	■■■□□ 2.11
HIF1A-211	ENST00000557446	ATP7B	P35670	1465 aa		28.21	■■■□□ 2.11
HIF1A-211	ENST00000557446	PRR36	Q9H6K5	1346 aa		28.2	■■■□□ 2.11
HIF1A-211	ENST00000557446	XPC	Q01831	940 aa	Predicted RBP	28.19	■■■□□ 2.1
HIF1A-211	ENST00000557446	TOPAZ1	Q8N9V7	1692 aa		28.18	■■■□□ 2.1
HIF1A-211	ENST00000557446	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.17	■■■□□ 2.1
HIF1A-211	ENST00000557446	CCER1	Q8TC90	406 aa	Predicted RBP	28.16	■■■□□ 2.1
HIF1A-211	ENST00000557446	CARD11	Q9BXL7	1154 aa		28.15	■■■□□ 2.1
HIF1A-211	ENST00000557446	PMFBP1	Q8TBY8	1022 aa		28.14	■■■□□ 2.1
HIF1A-211	ENST00000557446	CDK19	Q9BWU1	502 aa		28.14	■■■□□ 2.1
HIF1A-211	ENST00000557446	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.12	■■■□□ 2.09
HIF1A-211	ENST00000557446	NUTM2E	B1AL46	878 aa	Predicted RBP	28.12	■■■□□ 2.09
HIF1A-211	ENST00000557446	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.12	■■■□□ 2.09
HIF1A-211	ENST00000557446	KRT28	Q7Z3Y7	464 aa		28.1	■■■□□ 2.09
HIF1A-211	ENST00000557446	NUDT16	Q96DE0	195 aa	Known RBP	28.1	■■■□□ 2.09
HIF1A-211	ENST00000557446	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.09	■■■□□ 2.09
HIF1A-211	ENST00000557446	MEX3C	Q5U5Q3	659 aa	Known RBP	28.09	■■■□□ 2.09
HIF1A-211	ENST00000557446	TIMELESS	Q9UNS1	1208 aa		28.08	■■■□□ 2.09
HIF1A-211	ENST00000557446	TNS3	Q68CZ2	1445 aa		28.08	■■■□□ 2.09
HIF1A-211	ENST00000557446	SRPK2	P78362	688 aa	Known RBP	28.07	■■■□□ 2.08
HIF1A-211	ENST00000557446	SPATA31A3	Q5VYP0	1347 aa		28.06	■■■□□ 2.08
HIF1A-211	ENST00000557446	SBNO1	A3KN83	1393 aa		28.05	■■■□□ 2.08
HIF1A-211	ENST00000557446	PSME1	Q06323	249 aa		28.05	■■■□□ 2.08
HIF1A-211	ENST00000557446	ILDR2	Q71H61	639 aa		28.05	■■■□□ 2.08
HIF1A-211	ENST00000557446	SBNO2	Q9Y2G9	1366 aa		28.03	■■■□□ 2.08
HIF1A-211	ENST00000557446	EVC2	Q86UK5	1308 aa		28.03	■■■□□ 2.08
HIF1A-211	ENST00000557446	NGDN	Q8NEJ9	315 aa	Known RBP	28.03	■■■□□ 2.08
HIF1A-211	ENST00000557446	CABP2	Q9NPB3	220 aa		28.03	■■■□□ 2.08
HIF1A-211	ENST00000557446	RGS17	Q9UGC6	210 aa	Predicted RBP	28.03	■■■□□ 2.08
HIF1A-211	ENST00000557446	CCDC61	Q9Y6R9	512 aa		28.03	■■■□□ 2.08
HIF1A-211	ENST00000557446	MARF1	Q9Y4F3	1742 aa	Known RBP	28.02	■■■□□ 2.08
HIF1A-211	ENST00000557446	ALS2	Q96Q42	1657 aa		28.02	■■■□□ 2.08
HIF1A-211	ENST00000557446	ABCA3	Q99758	1704 aa		28.01	■■■□□ 2.07
HIF1A-211	ENST00000557446	PPIP5K1	Q6PFW1	1433 aa		28.01	■■■□□ 2.07
HIF1A-211	ENST00000557446	POLR3A	O14802	1390 aa	Predicted RBP	27.99	■■■□□ 2.07
HIF1A-211	ENST00000557446	ARHGEF10	O15013	1369 aa		27.98	■■■□□ 2.07
HIF1A-211	ENST00000557446	ADAMTS2	O95450	1211 aa		27.97	■■■□□ 2.07
HIF1A-211	ENST00000557446	PLEKHG3	A1L390	1219 aa		27.96	■■■□□ 2.07
HIF1A-211	ENST00000557446	LMOD2	Q6P5Q4	547 aa		27.96	■■■□□ 2.07
HIF1A-211	ENST00000557446	ACE	P12821	1306 aa		27.95	■■■□□ 2.07
HIF1A-211	ENST00000557446	C8orf37	Q96NL8	207 aa		27.95	■■■□□ 2.06
HIF1A-211	ENST00000557446	USP47	Q96K76	1375 aa		27.92	■■■□□ 2.06
HIF1A-211	ENST00000557446	AFF2	P51816	1311 aa		27.92	■■■□□ 2.06
HIF1A-211	ENST00000557446	ATAD2	Q6PL18	1390 aa		27.91	■■■□□ 2.06
HIF1A-211	ENST00000557446	POTEA	Q6S8J7	498 aa		27.91	■■■□□ 2.06
HIF1A-211	ENST00000557446	CRYBG1	Q9Y4K1	1723 aa		27.91	■■■□□ 2.06
HIF1A-211	ENST00000557446	PAK3	O75914	559 aa	Predicted RBP	27.9	■■■□□ 2.06
HIF1A-211	ENST00000557446	ZNF772	Q68DY9	489 aa	Predicted RBP	27.9	■■■□□ 2.06
HIF1A-211	ENST00000557446	AKAP12	Q02952	1782 aa		27.89	■■■□□ 2.06
HIF1A-211	ENST00000557446	ST20-MTHFS	A0A0A6YYL1	179 aa		27.89	■■■□□ 2.06
HIF1A-211	ENST00000557446	PLEKHG5	O94827	1062 aa		27.89	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms