RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 TMEM259Q4ZIN3 620 aa5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 NUTM2DQ5VT03 806 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 NUTM2AQ8IVF1 878 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 WWC1Q8IX03 1113 aa5.74□□□□□ -1.49
HMGB1P14-201ENST00000557424 PLEKHG3A1L390 1219 aa5.73□□□□□ -1.49
HMGB1P14-201ENST00000557424 SOCS7O14512 581 aa5.73□□□□□ -1.49
HMGB1P14-201ENST00000557424 IL21Q9HBE4 155 aa5.73□□□□□ -1.49
HMGB1P14-201ENST00000557424 C6orf229H3BNL8 230 aa5.72□□□□□ -1.49
HMGB1P14-201ENST00000557424 HRCP23327 699 aa5.72□□□□□ -1.49
HMGB1P14-201ENST00000557424 PTPN5P54829 565 aa5.72□□□□□ -1.49
HMGB1P14-201ENST00000557424 RETREG3Q86VR2 466 aa5.72□□□□□ -1.49
HMGB1P14-201ENST00000557424 IRX2Q9BZI1 471 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P14-201ENST00000557424 WBP1LQ9NX94 342 aa5.72□□□□□ -1.49
HMGB1P14-201ENST00000557424 MORN1Q5T089 497 aa5.71□□□□□ -1.5
HMGB1P14-201ENST00000557424 BANK1Q8NDB2 785 aa5.71□□□□□ -1.5
HMGB1P14-201ENST00000557424 POLR3EQ9NVU0 708 aa5.71□□□□□ -1.5
HMGB1P14-201ENST00000557424 MOXD2PA6NHM9 499 aa5.7□□□□□ -1.5
HMGB1P14-201ENST00000557424 RANGAP1P46060 587 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P14-201ENST00000557424 APLP1P51693 650 aa5.7□□□□□ -1.5
HMGB1P14-201ENST00000557424 DESI1Q6ICB0 168 aa5.7□□□□□ -1.5
HMGB1P14-201ENST00000557424 ZNF592Q92610 1267 aa5.7□□□□□ -1.5
HMGB1P14-201ENST00000557424 KCNC4Q03721 635 aa5.69□□□□□ -1.5
HMGB1P14-201ENST00000557424 MSS51Q4VC12 460 aa5.69□□□□□ -1.5
HMGB1P14-201ENST00000557424 PPP2R2DQ66LE6 453 aa5.69□□□□□ -1.5
HMGB1P14-201ENST00000557424 USB1Q9BQ65 265 aaKnown RBP5.69□□□□□ -1.5
HMGB1P14-201ENST00000557424 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P14-201ENST00000557424 RAD21O60216 631 aa5.68□□□□□ -1.5
HMGB1P14-201ENST00000557424 ADH1BP00325 375 aa5.68□□□□□ -1.5
HMGB1P14-201ENST00000557424 LILRB3O75022 631 aa5.67□□□□□ -1.5
HMGB1P14-201ENST00000557424 ZPR1O75312 459 aa5.67□□□□□ -1.5
HMGB1P14-201ENST00000557424 CSPP1Q1MSJ5 1256 aa5.67□□□□□ -1.5
HMGB1P14-201ENST00000557424 BLOC1S3Q6QNY0 202 aa5.67□□□□□ -1.5
HMGB1P14-201ENST00000557424 SPSB2Q99619 263 aa5.67□□□□□ -1.5
HMGB1P14-201ENST00000557424 MTRQ99707 1265 aa5.67□□□□□ -1.5
HMGB1P14-201ENST00000557424 SLC27A5Q9Y2P5 690 aa5.67□□□□□ -1.5
HMGB1P14-201ENST00000557424 RGS20O76081 388 aa5.66□□□□□ -1.5
HMGB1P14-201ENST00000557424 ITGBL1O95965 494 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P14-201ENST00000557424 RFC5P40937 340 aa5.66□□□□□ -1.5
HMGB1P14-201ENST00000557424 COPS2P61201 443 aa5.66□□□□□ -1.5
HMGB1P14-201ENST00000557424 SCUBE3Q8IX30 993 aa5.66□□□□□ -1.5
HMGB1P14-201ENST00000557424 ARMC2Q8NEN0 867 aa5.66□□□□□ -1.5
HMGB1P14-201ENST00000557424 NDUFV2P19404 249 aa5.65□□□□□ -1.5
HMGB1P14-201ENST00000557424 PUS10Q3MIT2 529 aaKnown RBP5.65□□□□□ -1.5
HMGB1P14-201ENST00000557424 TSC1Q92574 1164 aa5.65□□□□□ -1.5
HMGB1P14-201ENST00000557424 TRIM52Q96A61 297 aa5.65□□□□□ -1.5
HMGB1P14-201ENST00000557424 ARID3AQ99856 593 aa5.65□□□□□ -1.5
HMGB1P14-201ENST00000557424 C1orf115Q9H7X2 142 aa5.65□□□□□ -1.5
HMGB1P14-201ENST00000557424 LIMD1Q9UGP4 676 aa5.65□□□□□ -1.5
HMGB1P14-201ENST00000557424 AP1G2O75843 785 aa5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 JUNDP17535 347 aa5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 PTPRNQ16849 979 aa5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 IFFO2Q5TF58 517 aa5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 BRICD5Q6PL45 260 aa5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 NPM2Q86SE8 214 aaKnown RBP5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 PRR7Q8TB68 274 aa5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 SLC6A16Q9GZN6 736 aa5.64□□□□□ -1.51
HMGB1P14-201ENST00000557424 GPKOWQ92917 476 aaPredicted RBP eCLIP5.63□□□□□ -1.51
HMGB1P14-201ENST00000557424 ZMYND15Q9H091 742 aa5.63□□□□□ -1.51
HMGB1P14-201ENST00000557424 ZNF330Q9Y3S2 320 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P14-201ENST00000557424 ZC3H4Q9UPT8 1303 aaKnown RBP5.63□□□□□ -1.51
HMGB1P14-201ENST00000557424 USP17L8P0C7I0 530 aa5.62□□□□□ -1.51
HMGB1P14-201ENST00000557424 TJAP1Q5JTD0 557 aa5.62□□□□□ -1.51
HMGB1P14-201ENST00000557424 NBPF14Q5TI25 921 aa5.62□□□□□ -1.51
HMGB1P14-201ENST00000557424 NDUFB9Q9Y6M9 179 aa5.62□□□□□ -1.51
HMGB1P14-201ENST00000557424 ZBTB24O43167 697 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P14-201ENST00000557424 CCNYL3P0C7X3 344 aa5.61□□□□□ -1.51
HMGB1P14-201ENST00000557424 MMP16P51512 607 aa5.61□□□□□ -1.51
HMGB1P14-201ENST00000557424 QPCTQ16769 361 aa5.61□□□□□ -1.51
HMGB1P14-201ENST00000557424 PROCA1Q8NCQ7 364 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P14-201ENST00000557424 THAP11Q96EK4 314 aa5.61□□□□□ -1.51
HMGB1P14-201ENST00000557424 PCDHGC3Q9UN70 934 aa5.61□□□□□ -1.51
HMGB1P14-201ENST00000557424 DXOO77932 396 aaKnown RBP5.6□□□□□ -1.51
HMGB1P14-201ENST00000557424 GUCA2AQ02747 115 aa5.6□□□□□ -1.51
HMGB1P14-201ENST00000557424 MCM6Q14566 821 aa5.6□□□□□ -1.51
HMGB1P14-201ENST00000557424 RNF19BQ6ZMZ0 732 aa5.6□□□□□ -1.51
HMGB1P14-201ENST00000557424 CABLES1Q8TDN4 633 aa5.6□□□□□ -1.51
HMGB1P14-201ENST00000557424 NUDT12Q9BQG2 462 aa5.6□□□□□ -1.51
HMGB1P14-201ENST00000557424 PCDHB15Q9Y5E8 787 aa5.6□□□□□ -1.51
HMGB1P14-201ENST00000557424 LYPD8Q6UX82 237 aa5.59□□□□□ -1.51
HMGB1P14-201ENST00000557424 ARID3CA6NKF2 412 aa5.58□□□□□ -1.52
HMGB1P14-201ENST00000557424 WASHC4Q2M389 1173 aa5.58□□□□□ -1.52
HMGB1P14-201ENST00000557424 ANKLE1Q8NAG6 615 aa5.58□□□□□ -1.52
HMGB1P14-201ENST00000557424 CFAP99D6REC4 459 aa5.57□□□□□ -1.52
HMGB1P14-201ENST00000557424 CTHP32929 405 aa5.57□□□□□ -1.52
HMGB1P14-201ENST00000557424 MCCD1P59942 119 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P14-201ENST00000557424 RTL5Q5HYW3 569 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P14-201ENST00000557424 HLA-CQ95604 372 aa5.57□□□□□ -1.52
HMGB1P14-201ENST00000557424 GPSM3Q9Y4H4 160 aa5.57□□□□□ -1.52
HMGB1P14-201ENST00000557424 A0A0G2JS52 829 aa5.56□□□□□ -1.52
HMGB1P14-201ENST00000557424 TLL1O43897 1013 aa5.56□□□□□ -1.52
HMGB1P14-201ENST00000557424 SOX11P35716 441 aa5.56□□□□□ -1.52
HMGB1P14-201ENST00000557424 Q6ZNB5 142 aa5.56□□□□□ -1.52
HMGB1P14-201ENST00000557424 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.56□□□□□ -1.52
HMGB1P14-201ENST00000557424 A6NJR5 290 aa5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 CD2BP2O95400 341 aaKnown RBP5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 S1PR4O95977 384 aa5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 RPIAP49247 311 aa5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 PTK2Q05397 1052 aa5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 KCNH2Q12809 1159 aa5.55□□□□□ -1.52
HMGB1P14-201ENST00000557424 CCDC125Q86Z20 511 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms