RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SKOR2Q2VWA4 1001 aaPredicted RBP10.18□□□□□ -0.78
CHD8-213ENST00000557364 RIPK4P57078 832 aa10.17□□□□□ -0.78
CHD8-213ENST00000557364 RALYLQ86SE5 291 aaKnown RBP10.17□□□□□ -0.78
CHD8-213ENST00000557364 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
CHD8-213ENST00000557364 WDHD1O75717 1129 aaPredicted RBP10.17□□□□□ -0.78
CHD8-213ENST00000557364 CCDC30Q5VVM6 783 aa10.17□□□□□ -0.78
CHD8-213ENST00000557364 ERC1Q8IUD2 1116 aa10.17□□□□□ -0.78
CHD8-213ENST00000557364 KLHL34Q8N239 644 aa10.17□□□□□ -0.78
CHD8-213ENST00000557364 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
CHD8-213ENST00000557364 LRRC9Q6ZRR7 1453 aa10.16□□□□□ -0.78
CHD8-213ENST00000557364 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
CHD8-213ENST00000557364 CNTLNQ9NXG0 1405 aa10.16□□□□□ -0.78
CHD8-213ENST00000557364 RDXP35241 583 aaKnown RBP10.16□□□□□ -0.78
CHD8-213ENST00000557364 ANKRD45Q5TZF3 282 aa10.16□□□□□ -0.78
CHD8-213ENST00000557364 NCOA2Q15596 1464 aa10.16□□□□□ -0.78
CHD8-213ENST00000557364 RAD21O60216 631 aa10.16□□□□□ -0.78
CHD8-213ENST00000557364 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
CHD8-213ENST00000557364 NFXL1Q6ZNB6 911 aa10.15□□□□□ -0.78
CHD8-213ENST00000557364 CLUAP1Q96AJ1 413 aa10.15□□□□□ -0.78
CHD8-213ENST00000557364 ANKRD30BQ9BXX2 1392 aa10.15□□□□□ -0.78
CHD8-213ENST00000557364 GNAI3P08754 354 aa10.15□□□□□ -0.78
CHD8-213ENST00000557364 TOPBP1Q92547 1522 aa10.15□□□□□ -0.79
CHD8-213ENST00000557364 PES1O00541 588 aaKnown RBP10.15□□□□□ -0.79
CHD8-213ENST00000557364 BECN2A8MW95 431 aa10.14□□□□□ -0.79
CHD8-213ENST00000557364 TOP2BQ02880 1626 aa10.14□□□□□ -0.79
CHD8-213ENST00000557364 TROQ12816 1431 aaPredicted RBP10.14□□□□□ -0.79
CHD8-213ENST00000557364 C9orf84Q5VXU9 1444 aa10.14□□□□□ -0.79
CHD8-213ENST00000557364 ZBED9Q6R2W3 1325 aa10.14□□□□□ -0.79
CHD8-213ENST00000557364 PSMA5P28066 241 aa10.14□□□□□ -0.79
CHD8-213ENST00000557364 DZIP1LQ8IYY4 767 aaKnown RBP10.14□□□□□ -0.79
CHD8-213ENST00000557364 PPP6R1Q9UPN7 881 aa10.14□□□□□ -0.79
CHD8-213ENST00000557364 CREBRFQ8IUR6 639 aa10.13□□□□□ -0.79
CHD8-213ENST00000557364 LRPPRCP42704 1394 aaKnown RBP10.13□□□□□ -0.79
CHD8-213ENST00000557364 INTS3Q68E01 1043 aaKnown RBP10.13□□□□□ -0.79
CHD8-213ENST00000557364 UBTFL1P0CB47 393 aaPredicted RBP10.13□□□□□ -0.79
CHD8-213ENST00000557364 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
CHD8-213ENST00000557364 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.12□□□□□ -0.793e-6■■■■■ 26.9
CHD8-213ENST00000557364 SNAPC4Q5SXM2 1469 aa10.12□□□□□ -0.79
CHD8-213ENST00000557364 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
CHD8-213ENST00000557364 KCNH5Q8NCM2 988 aa10.12□□□□□ -0.79
CHD8-213ENST00000557364 SPRYD3Q8NCJ5 442 aa10.12□□□□□ -0.79
CHD8-213ENST00000557364 CCDC141Q6ZP82 1450 aa10.11□□□□□ -0.79
CHD8-213ENST00000557364 MCTP1Q6DN14 999 aa10.11□□□□□ -0.79
CHD8-213ENST00000557364 KIF14Q15058 1648 aa10.11□□□□□ -0.79
CHD8-213ENST00000557364 GPS2Q13227 327 aa10.11□□□□□ -0.79
CHD8-213ENST00000557364 RRP7AQ9Y3A4 280 aaKnown RBP10.11□□□□□ -0.79
CHD8-213ENST00000557364 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
CHD8-213ENST00000557364 ANO2Q9NQ90 1003 aa10.11□□□□□ -0.79
CHD8-213ENST00000557364 IQGAP2Q13576 1575 aa10.11□□□□□ -0.79
CHD8-213ENST00000557364 GOLGA6L3A6NEY3 463 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 ZSCAN25Q6NSZ9 544 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 KAT6BQ8WYB5 2073 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 CLASRPQ8N2M8 674 aaKnown RBP10.1□□□□□ -0.79
CHD8-213ENST00000557364 ZNF652Q9Y2D9 606 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 KIAA0586Q9BVV6 1533 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 CNTROBQ8N137 903 aa10.1□□□□□ -0.79
CHD8-213ENST00000557364 CCDC27Q2M243 656 aa10.09□□□□□ -0.79
CHD8-213ENST00000557364 ODF2Q5BJF6 829 aa10.09□□□□□ -0.79
CHD8-213ENST00000557364 PRDM11Q9NQV5 511 aa10.09□□□□□ -0.79
CHD8-213ENST00000557364 CABP4P57796 275 aa10.09□□□□□ -0.79
CHD8-213ENST00000557364 ELL2O00472 640 aaPredicted RBP10.09□□□□□ -0.79
CHD8-213ENST00000557364 NACAP1Q9BZK3 213 aa10.09□□□□□ -0.79
CHD8-213ENST00000557364 IKQ13123 557 aaPredicted RBP10.09□□□□□ -0.79
CHD8-213ENST00000557364 PRKRIP1Q9H875 184 aaPredicted RBP10.09□□□□□ -0.79
CHD8-213ENST00000557364 RTEL1-TNFRSF6BF6WH68 1400 aa10.08□□□□□ -0.8
CHD8-213ENST00000557364 TXLNAP40222 546 aa10.08□□□□□ -0.8
CHD8-213ENST00000557364 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
CHD8-213ENST00000557364 CCDC158Q5M9N0 1113 aa10.08□□□□□ -0.8
CHD8-213ENST00000557364 BRD4O60885 1362 aaPredicted RBP10.08□□□□□ -0.8
CHD8-213ENST00000557364 PCMTD1Q96MG8 357 aaPredicted RBP10.08□□□□□ -0.8
CHD8-213ENST00000557364 NAT10Q9H0A0 1025 aaKnown RBP10.08□□□□□ -0.8
CHD8-213ENST00000557364 EPS15P42566 896 aa10.08□□□□□ -0.8
CHD8-213ENST00000557364 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
CHD8-213ENST00000557364 WASHC4Q2M389 1173 aa10.08□□□□□ -0.8
CHD8-213ENST00000557364 NEUROD6Q96NK8 337 aa10.08□□□□□ -0.8
CHD8-213ENST00000557364 PDCP20941 246 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 CT47A1Q5JQC4 288 aaPredicted RBP10.07□□□□□ -0.8
CHD8-213ENST00000557364 CDR1P51861 262 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 STRN4Q9NRL3 753 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 TRIM21P19474 475 aaKnown RBP10.07□□□□□ -0.8
CHD8-213ENST00000557364 SLKQ9H2G2 1235 aaPredicted RBP10.07□□□□□ -0.8
CHD8-213ENST00000557364 ZNF287Q9HBT7 754 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 MCM2P49736 904 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 POLA1P09884 1462 aaPredicted RBP10.07□□□□□ -0.8
CHD8-213ENST00000557364 APAF1O14727 1248 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 DHX8Q14562 1220 aaKnown RBP10.07□□□□□ -0.8
CHD8-213ENST00000557364 AFAP1Q8N556 730 aa10.07□□□□□ -0.8
CHD8-213ENST00000557364 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.06□□□□□ -0.8
CHD8-213ENST00000557364 STARD3NLO95772 234 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 PDIA4P13667 645 aaKnown RBP10.06□□□□□ -0.8
CHD8-213ENST00000557364 NUCB2P80303 420 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 MYO6Q9UM54 1294 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 CCT4P50991 539 aaKnown RBP10.06□□□□□ -0.8
CHD8-213ENST00000557364 CCDC73Q6ZRK6 1079 aa10.06□□□□□ -0.8
CHD8-213ENST00000557364 RBM42Q9BTD8 480 aaKnown RBP10.06□□□□□ -0.8
CHD8-213ENST00000557364 RRP1P56182 461 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms