RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 GPCPD1Q9NPB8 672 aa8.21□□□□□ -1.1
FOXN3-213ENST00000556916 HOXA2O43364 376 aa8.2□□□□□ -1.1
FOXN3-213ENST00000556916 LMOD2Q6P5Q4 547 aa8.2□□□□□ -1.1
FOXN3-213ENST00000556916 ST8SIA5O15466 376 aa8.19□□□□□ -1.1
FOXN3-213ENST00000556916 CLCN1P35523 988 aa8.19□□□□□ -1.1
FOXN3-213ENST00000556916 USP46P62068 366 aa8.19□□□□□ -1.1
FOXN3-213ENST00000556916 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
FOXN3-213ENST00000556916 FAM217BQ9NTX9 383 aaPredicted RBP8.19□□□□□ -1.1
FOXN3-213ENST00000556916 ZBTB24O43167 697 aaPredicted RBP8.18□□□□□ -1.1
FOXN3-213ENST00000556916 CD2BP2O95400 341 aaKnown RBP8.18□□□□□ -1.1
FOXN3-213ENST00000556916 MMP16P51512 607 aa8.18□□□□□ -1.1
FOXN3-213ENST00000556916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.18□□□□□ -1.1
FOXN3-213ENST00000556916 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
FOXN3-213ENST00000556916 DXOO77932 396 aaKnown RBP8.16□□□□□ -1.1
FOXN3-213ENST00000556916 TRIM32Q13049 653 aa8.16□□□□□ -1.1
FOXN3-213ENST00000556916 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
FOXN3-213ENST00000556916 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
FOXN3-213ENST00000556916 TOR4AQ9NXH8 423 aa8.16□□□□□ -1.1
FOXN3-213ENST00000556916 AAASQ9NRG9 546 aa8.15□□□□□ -1.1
FOXN3-213ENST00000556916 REPIN1Q9BWE0 567 aaKnown RBP8.14□□□□□ -1.11
FOXN3-213ENST00000556916 POTECB2RU33 542 aa8.13□□□□□ -1.11
FOXN3-213ENST00000556916 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
FOXN3-213ENST00000556916 CCDC24Q8N4L8 307 aa8.13□□□□□ -1.11
FOXN3-213ENST00000556916 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
FOXN3-213ENST00000556916 SYMPKQ92797 1274 aaKnown RBP8.12□□□□□ -1.11
FOXN3-213ENST00000556916 ZNF775Q96BV0 537 aaPredicted RBP8.12□□□□□ -1.11
FOXN3-213ENST00000556916 TTC24A2A3L6 582 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-213ENST00000556916 WNT7AO00755 349 aa8.11□□□□□ -1.11
FOXN3-213ENST00000556916 JUNDP17535 347 aa8.11□□□□□ -1.11
FOXN3-213ENST00000556916 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
FOXN3-213ENST00000556916 AVPP01185 164 aa8.1□□□□□ -1.11
FOXN3-213ENST00000556916 BARGINQ6ZT62 677 aa8.1□□□□□ -1.11
FOXN3-213ENST00000556916 ZMYND10O75800 440 aa8.09□□□□□ -1.11
FOXN3-213ENST00000556916 FDX1P10109 184 aa8.09□□□□□ -1.11
FOXN3-213ENST00000556916 RETREG3Q86VR2 466 aa8.09□□□□□ -1.11
FOXN3-213ENST00000556916 ZC3H15Q8WU90 426 aaKnown RBP8.09□□□□□ -1.11
FOXN3-213ENST00000556916 MRGPRX2Q96LB1 330 aa8.09□□□□□ -1.11
FOXN3-213ENST00000556916 AXIN1O15169 862 aa8.08□□□□□ -1.12
FOXN3-213ENST00000556916 SSTR3P32745 418 aaPredicted RBP8.08□□□□□ -1.12
FOXN3-213ENST00000556916 AMHR2Q16671 573 aa8.08□□□□□ -1.12
FOXN3-213ENST00000556916 DACH1Q9UI36 760 aa8.08□□□□□ -1.12
FOXN3-213ENST00000556916 PCDHGC3Q9UN70 934 aa8.08□□□□□ -1.12
FOXN3-213ENST00000556916 CTC1Q2NKJ3 1217 aa8.07□□□□□ -1.12
FOXN3-213ENST00000556916 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
FOXN3-213ENST00000556916 SPIRE2Q8WWL2 714 aa8.07□□□□□ -1.12
FOXN3-213ENST00000556916 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
FOXN3-213ENST00000556916 C6orf229H3BNL8 230 aa8.06□□□□□ -1.12
FOXN3-213ENST00000556916 SMPD1P17405 629 aa8.06□□□□□ -1.12
FOXN3-213ENST00000556916 SKOR1P84550 965 aa8.06□□□□□ -1.12
FOXN3-213ENST00000556916 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
FOXN3-213ENST00000556916 MOXD2PA6NHM9 499 aa8.05□□□□□ -1.12
FOXN3-213ENST00000556916 J3QL48 77 aa8.05□□□□□ -1.12
FOXN3-213ENST00000556916 GMPR2Q9P2T1 348 aaKnown RBP8.05□□□□□ -1.12
FOXN3-213ENST00000556916 NDUFV2P19404 249 aa8.04□□□□□ -1.12
FOXN3-213ENST00000556916 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-213ENST00000556916 WNT7BP56706 349 aa8.04□□□□□ -1.12
FOXN3-213ENST00000556916 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
FOXN3-213ENST00000556916 MS4A1P11836 297 aa8.03□□□□□ -1.12
FOXN3-213ENST00000556916 PARP9Q8IXQ6 854 aa8.03□□□□□ -1.12
FOXN3-213ENST00000556916 CCNYL3P0C7X3 344 aa8.02□□□□□ -1.13
FOXN3-213ENST00000556916 PTCRAQ6ISU1 281 aaPredicted RBP8.02□□□□□ -1.13
FOXN3-213ENST00000556916 BEGAINQ9BUH8 593 aa8.02□□□□□ -1.13
FOXN3-213ENST00000556916 HPS1Q92902 700 aa8.01□□□□□ -1.13
FOXN3-213ENST00000556916 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
FOXN3-213ENST00000556916 PTPRNQ16849 979 aa8□□□□□ -1.13
FOXN3-213ENST00000556916 PRR7Q8TB68 274 aa8□□□□□ -1.13
FOXN3-213ENST00000556916 MTMR2Q13614 643 aa7.99□□□□□ -1.13
FOXN3-213ENST00000556916 EHBP1Q8NDI1 1231 aa7.99□□□□□ -1.13
FOXN3-213ENST00000556916 ATP13A2Q9NQ11 1180 aa7.99□□□□□ -1.13
FOXN3-213ENST00000556916 TRIM66O15016 1216 aa7.98□□□□□ -1.13
FOXN3-213ENST00000556916 ALDH1A1P00352 501 aa7.98□□□□□ -1.13
FOXN3-213ENST00000556916 LINC01559Q495D7 138 aa7.98□□□□□ -1.13
FOXN3-213ENST00000556916 TBC1D2Q9BYX2 928 aa7.98□□□□□ -1.13
FOXN3-213ENST00000556916 UNC93B1Q9H1C4 597 aa7.98□□□□□ -1.13
FOXN3-213ENST00000556916 RSBN1LQ6PCB5 846 aaPredicted RBP7.97□□□□□ -1.13
FOXN3-213ENST00000556916 SPDYE5A6NIY4 337 aa7.96□□□□□ -1.14
FOXN3-213ENST00000556916 SH3BP2P78314 561 aa7.96□□□□□ -1.14
FOXN3-213ENST00000556916 SIAH2O43255 324 aa7.95□□□□□ -1.14
FOXN3-213ENST00000556916 DIXDC1Q155Q3 683 aa7.95□□□□□ -1.14
FOXN3-213ENST00000556916 AK7Q96M32 723 aa7.95□□□□□ -1.14
FOXN3-213ENST00000556916 TLL2Q9Y6L7 1015 aa7.95□□□□□ -1.14
FOXN3-213ENST00000556916 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
FOXN3-213ENST00000556916 KCNH2Q12809 1159 aa7.94□□□□□ -1.14
FOXN3-213ENST00000556916 DESI1Q6ICB0 168 aa7.94□□□□□ -1.14
FOXN3-213ENST00000556916 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
FOXN3-213ENST00000556916 EVA1BQ9NVM1 165 aa7.94□□□□□ -1.14
FOXN3-213ENST00000556916 CFAP99D6REC4 459 aa7.93□□□□□ -1.14
FOXN3-213ENST00000556916 GJA5P36382 358 aa7.93□□□□□ -1.14
FOXN3-213ENST00000556916 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
FOXN3-213ENST00000556916 BAP1Q92560 729 aa7.93□□□□□ -1.14
FOXN3-213ENST00000556916 BCANQ96GW7 911 aa7.93□□□□□ -1.14
FOXN3-213ENST00000556916 TRIM47Q96LD4 638 aa7.93□□□□□ -1.14
FOXN3-213ENST00000556916 PCDHB15Q9Y5E8 787 aa7.93□□□□□ -1.14
FOXN3-213ENST00000556916 WASF2Q9Y6W5 498 aa7.93□□□□□ -1.14
FOXN3-213ENST00000556916 SPTLC1O15269 473 aa7.92□□□□□ -1.14
FOXN3-213ENST00000556916 CSPP1Q1MSJ5 1256 aa7.92□□□□□ -1.14
FOXN3-213ENST00000556916 ZNF511Q8NB15 262 aa7.92□□□□□ -1.14
FOXN3-213ENST00000556916 CABLES1Q8TDN4 633 aa7.92□□□□□ -1.14
FOXN3-213ENST00000556916 ZBTB3Q9H5J0 574 aa7.92□□□□□ -1.14
FOXN3-213ENST00000556916 SENP2Q9HC62 589 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms