RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 NBPF8Q3BBV2 869 aa17.53■□□□□ 0.4
SRSF5-215ENST00000556587 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
SRSF5-215ENST00000556587 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.4
SRSF5-215ENST00000556587 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
SRSF5-215ENST00000556587 PPLO60437 1756 aa17.5■□□□□ 0.39
SRSF5-215ENST00000556587 PRAG1Q86YV5 1406 aa17.48■□□□□ 0.39
SRSF5-215ENST00000556587 PTCH1Q13635 1447 aa17.47■□□□□ 0.39
SRSF5-215ENST00000556587 NEFLP07196 543 aa17.47■□□□□ 0.39
SRSF5-215ENST00000556587 RALGAPBQ86X10 1494 aa17.46■□□□□ 0.39
SRSF5-215ENST00000556587 LAMC1P11047 1609 aa17.46■□□□□ 0.39
SRSF5-215ENST00000556587 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
SRSF5-215ENST00000556587 USP47Q96K76 1375 aa17.43■□□□□ 0.38
SRSF5-215ENST00000556587 ROBO2Q9HCK4 1378 aa17.43■□□□□ 0.38
SRSF5-215ENST00000556587 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
SRSF5-215ENST00000556587 VGFO15240 615 aaPredicted RBP17.43■□□□□ 0.38
SRSF5-215ENST00000556587 RPGRIP1LQ68CZ1 1315 aa17.42■□□□□ 0.38
SRSF5-215ENST00000556587 C1orf167Q5SNV9 1468 aa17.42■□□□□ 0.38
SRSF5-215ENST00000556587 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-215ENST00000556587 MEX3CQ5U5Q3 659 aaKnown RBP17.41■□□□□ 0.38
SRSF5-215ENST00000556587 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-215ENST00000556587 IFT172Q9UG01 1749 aa17.41■□□□□ 0.38
SRSF5-215ENST00000556587 DDX17Q92841 729 aaKnown RBP17.4■□□□□ 0.38
SRSF5-215ENST00000556587 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.38
SRSF5-215ENST00000556587 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.38
SRSF5-215ENST00000556587 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
SRSF5-215ENST00000556587 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
SRSF5-215ENST00000556587 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
SRSF5-215ENST00000556587 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
SRSF5-215ENST00000556587 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
SRSF5-215ENST00000556587 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
SRSF5-215ENST00000556587 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
SRSF5-215ENST00000556587 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
SRSF5-215ENST00000556587 CDK12Q9NYV4 1490 aaPredicted RBP17.35■□□□□ 0.37
SRSF5-215ENST00000556587 AFF2P51816 1311 aa17.34■□□□□ 0.37
SRSF5-215ENST00000556587 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
SRSF5-215ENST00000556587 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
SRSF5-215ENST00000556587 ADGRF5Q8IZF2 1346 aa17.33■□□□□ 0.37
SRSF5-215ENST00000556587 ORAI2Q96SN7 254 aa17.33■□□□□ 0.37
SRSF5-215ENST00000556587 TECPR2O15040 1411 aa17.33■□□□□ 0.36
SRSF5-215ENST00000556587 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
SRSF5-215ENST00000556587 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
SRSF5-215ENST00000556587 FKBP8Q14318 412 aa17.32■□□□□ 0.36
SRSF5-215ENST00000556587 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
SRSF5-215ENST00000556587 RXRBP28702 533 aa17.31■□□□□ 0.36
SRSF5-215ENST00000556587 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
SRSF5-215ENST00000556587 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
SRSF5-215ENST00000556587 UPF1Q92900 1129 aaKnown RBP eCLIP17.29■□□□□ 0.36
SRSF5-215ENST00000556587 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
SRSF5-215ENST00000556587 C8orf37Q96NL8 207 aa17.29■□□□□ 0.36
SRSF5-215ENST00000556587 PXDNQ92626 1479 aa17.28■□□□□ 0.36
SRSF5-215ENST00000556587 EP400Q96L91 3159 aa17.28■□□□□ 0.36
SRSF5-215ENST00000556587 ERICH6BQ5W0A0 696 aa17.28■□□□□ 0.36
SRSF5-215ENST00000556587 KDM2AQ9Y2K7 1162 aa17.28■□□□□ 0.36
SRSF5-215ENST00000556587 RGL3Q3MIN7 710 aa17.27■□□□□ 0.36
SRSF5-215ENST00000556587 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.36
SRSF5-215ENST00000556587 RGS12O14924 1447 aa17.27■□□□□ 0.35
SRSF5-215ENST00000556587 ZBED9Q6R2W3 1325 aa17.26■□□□□ 0.35
SRSF5-215ENST00000556587 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
SRSF5-215ENST00000556587 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
SRSF5-215ENST00000556587 MYOM2P54296 1465 aa17.25■□□□□ 0.35
SRSF5-215ENST00000556587 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
SRSF5-215ENST00000556587 MARF1Q9Y4F3 1742 aaKnown RBP17.25■□□□□ 0.35
SRSF5-215ENST00000556587 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
SRSF5-215ENST00000556587 NRXN1Q9ULB1 1477 aa17.25■□□□□ 0.35
SRSF5-215ENST00000556587 PLEKHH1Q9ULM0 1364 aa17.25■□□□□ 0.35
SRSF5-215ENST00000556587 ADAMTS2O95450 1211 aa17.24■□□□□ 0.35
SRSF5-215ENST00000556587 WAPLQ7Z5K2 1190 aa17.24■□□□□ 0.35
SRSF5-215ENST00000556587 QTRT2Q9H974 415 aaKnown RBP17.24■□□□□ 0.35
SRSF5-215ENST00000556587 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
SRSF5-215ENST00000556587 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
SRSF5-215ENST00000556587 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
SRSF5-215ENST00000556587 RBM6P78332 1123 aaKnown RBP17.22■□□□□ 0.35
SRSF5-215ENST00000556587 ESCO1Q5FWF5 840 aa17.22■□□□□ 0.35
SRSF5-215ENST00000556587 SRCAPQ6ZRS2 3230 aa17.22■□□□□ 0.35
SRSF5-215ENST00000556587 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
SRSF5-215ENST00000556587 STK26Q9P289 416 aa17.22■□□□□ 0.35
SRSF5-215ENST00000556587 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
SRSF5-215ENST00000556587 NGLY1Q96IV0 654 aa17.22■□□□□ 0.35
SRSF5-215ENST00000556587 RALBP1Q15311 655 aa17.21■□□□□ 0.35
SRSF5-215ENST00000556587 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
SRSF5-215ENST00000556587 KIF1AQ12756 1690 aa17.21■□□□□ 0.34
SRSF5-215ENST00000556587 FNBP4Q8N3X1 1017 aaPredicted RBP17.2■□□□□ 0.34
SRSF5-215ENST00000556587 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
SRSF5-215ENST00000556587 FOXO3O43524 673 aa17.2■□□□□ 0.34
SRSF5-215ENST00000556587 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
SRSF5-215ENST00000556587 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
SRSF5-215ENST00000556587 USP21Q9UK80 565 aa17.18■□□□□ 0.34
SRSF5-215ENST00000556587 ATRNO75882 1429 aa17.18■□□□□ 0.34
SRSF5-215ENST00000556587 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
SRSF5-215ENST00000556587 NUTM2FA1L443 756 aa17.17■□□□□ 0.34
SRSF5-215ENST00000556587 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
SRSF5-215ENST00000556587 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
SRSF5-215ENST00000556587 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
SRSF5-215ENST00000556587 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.15■□□□□ 0.34
SRSF5-215ENST00000556587 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
SRSF5-215ENST00000556587 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
SRSF5-215ENST00000556587 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
SRSF5-215ENST00000556587 ADGRB1O14514 1584 aa17.14■□□□□ 0.33
SRSF5-215ENST00000556587 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
SRSF5-215ENST00000556587 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms