RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 GAS2L2Q8NHY3 880 aa21.51■■□□□ 1.03
PTPN21-208ENST00000556564 RRP1P56182 461 aaKnown RBP21.51■■□□□ 1.03
PTPN21-208ENST00000556564 ADAMTS8Q9UP79 889 aa21.51■■□□□ 1.03
PTPN21-208ENST00000556564 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
PTPN21-208ENST00000556564 NAIPQ13075 1403 aa21.51■■□□□ 1.03
PTPN21-208ENST00000556564 RRS1Q15050 365 aaKnown RBP21.51■■□□□ 1.03
PTPN21-208ENST00000556564 API5Q9BZZ5 524 aaKnown RBP21.5■■□□□ 1.03
PTPN21-208ENST00000556564 ZC3H6P61129 1189 aaKnown RBP21.5■■□□□ 1.03
PTPN21-208ENST00000556564 SF3B2Q13435 895 aaKnown RBP21.5■■□□□ 1.03
PTPN21-208ENST00000556564 ERICH6BQ5W0A0 696 aa21.5■■□□□ 1.03
PTPN21-208ENST00000556564 NUDT16Q96DE0 195 aaKnown RBP21.5■■□□□ 1.03
PTPN21-208ENST00000556564 EXOC6Q8TAG9 804 aa21.49■■□□□ 1.03
PTPN21-208ENST00000556564 SULT6B1Q6IMI4 303 aa21.49■■□□□ 1.03
PTPN21-208ENST00000556564 NOL10Q9BSC4 688 aaKnown RBP21.49■■□□□ 1.03
PTPN21-208ENST00000556564 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
PTPN21-208ENST00000556564 DZIP1LQ8IYY4 767 aaKnown RBP21.48■■□□□ 1.03
PTPN21-208ENST00000556564 FOXD4L1Q9NU39 408 aa21.48■■□□□ 1.03
PTPN21-208ENST00000556564 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
PTPN21-208ENST00000556564 CABP4P57796 275 aa21.47■■□□□ 1.03
PTPN21-208ENST00000556564 CTTNBP2Q8WZ74 1663 aa21.47■■□□□ 1.03
PTPN21-208ENST00000556564 RAD21O60216 631 aa21.47■■□□□ 1.03
PTPN21-208ENST00000556564 IFIT2P09913 472 aaKnown RBP21.47■■□□□ 1.03
PTPN21-208ENST00000556564 TRIM34Q9BYJ4 488 aa21.46■■□□□ 1.03
PTPN21-208ENST00000556564 G3BP1Q13283 466 aaKnown RBP eCLIP21.46■■□□□ 1.03
PTPN21-208ENST00000556564 AMOTL2Q9Y2J4 779 aa21.46■■□□□ 1.03
PTPN21-208ENST00000556564 DDX19BQ9UMR2 479 aa21.45■■□□□ 1.02
PTPN21-208ENST00000556564 PPP1R1BQ9UD71 204 aaPredicted RBP21.45■■□□□ 1.02
PTPN21-208ENST00000556564 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
PTPN21-208ENST00000556564 GOLGA6L6A8MZA4 724 aa21.45■■□□□ 1.02
PTPN21-208ENST00000556564 IDI1Q13907 227 aa21.45■■□□□ 1.02
PTPN21-208ENST00000556564 KIF6Q6ZMV9 814 aa21.44■■□□□ 1.02
PTPN21-208ENST00000556564 TCP11L2Q8N4U5 519 aa21.44■■□□□ 1.02
PTPN21-208ENST00000556564 TEX14Q8IWB6 1497 aa21.44■■□□□ 1.02
PTPN21-208ENST00000556564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.44■■□□□ 1.02
PTPN21-208ENST00000556564 AMER1Q5JTC6 1135 aaPredicted RBP21.44■■□□□ 1.02
PTPN21-208ENST00000556564 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
PTPN21-208ENST00000556564 ATP10BO94823 1461 aa21.43■■□□□ 1.02
PTPN21-208ENST00000556564 VPS53Q5VIR6 699 aa21.43■■□□□ 1.02
PTPN21-208ENST00000556564 SPG7Q9UQ90 795 aa21.43■■□□□ 1.02
PTPN21-208ENST00000556564 DNTTIP2Q5QJE6 756 aaKnown RBP21.43■■□□□ 1.02
PTPN21-208ENST00000556564 ZNF428Q96B54 188 aa21.43■■□□□ 1.02
PTPN21-208ENST00000556564 ATAD2Q6PL18 1390 aa21.43■■□□□ 1.02
PTPN21-208ENST00000556564 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
PTPN21-208ENST00000556564 DIAPH3Q9NSV4 1193 aa21.41■■□□□ 1.02
PTPN21-208ENST00000556564 ADAMTS2O95450 1211 aa21.41■■□□□ 1.02
PTPN21-208ENST00000556564 WDR7Q9Y4E6 1490 aa21.41■■□□□ 1.02
PTPN21-208ENST00000556564 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
PTPN21-208ENST00000556564 APPP05067 770 aa21.4■■□□□ 1.02
PTPN21-208ENST00000556564 BRD4O60885 1362 aaPredicted RBP21.4■■□□□ 1.02
PTPN21-208ENST00000556564 AMOTL1Q8IY63 956 aa21.4■■□□□ 1.02
PTPN21-208ENST00000556564 CCDC30Q5VVM6 783 aa21.4■■□□□ 1.02
PTPN21-208ENST00000556564 CENPQQ7L2Z9 268 aaPredicted RBP21.4■■□□□ 1.02
PTPN21-208ENST00000556564 ADGRF5Q8IZF2 1346 aa21.39■■□□□ 1.02
PTPN21-208ENST00000556564 KIF16BQ96L93 1317 aa21.39■■□□□ 1.02
PTPN21-208ENST00000556564 NEUROD6Q96NK8 337 aa21.38■■□□□ 1.01
PTPN21-208ENST00000556564 DHX29Q7Z478 1369 aaKnown RBP21.38■■□□□ 1.01
PTPN21-208ENST00000556564 CCDC61Q9Y6R9 512 aa21.38■■□□□ 1.01
PTPN21-208ENST00000556564 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
PTPN21-208ENST00000556564 GPATCH8Q9UKJ3 1502 aaKnown RBP21.37■■□□□ 1.01
PTPN21-208ENST00000556564 UBTFL1P0CB47 393 aaPredicted RBP21.36■■□□□ 1.01
PTPN21-208ENST00000556564 RASSF8Q8NHQ8 419 aa21.36■■□□□ 1.01
PTPN21-208ENST00000556564 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
PTPN21-208ENST00000556564 NOS1P29475 1434 aa21.36■■□□□ 1.01
PTPN21-208ENST00000556564 TNRQ92752 1358 aa21.36■■□□□ 1.01
PTPN21-208ENST00000556564 PLCH2O75038 1416 aa21.36■■□□□ 1.01
PTPN21-208ENST00000556564 LRRFIP1Q32MZ4 808 aaKnown RBP21.36■■□□□ 1.01
PTPN21-208ENST00000556564 PANK1Q8TE04 598 aa21.35■■□□□ 1.01
PTPN21-208ENST00000556564 NCOA1Q15788 1441 aa21.35■■□□□ 1.01
PTPN21-208ENST00000556564 FOXD4L5Q5VV16 416 aaPredicted RBP21.35■■□□□ 1.01
PTPN21-208ENST00000556564 FOXD4L4Q8WXT5 416 aaPredicted RBP21.35■■□□□ 1.01
PTPN21-208ENST00000556564 FOXO3O43524 673 aa21.35■■□□□ 1.01
PTPN21-208ENST00000556564 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
PTPN21-208ENST00000556564 DRC7Q8IY82 874 aa21.34■■□□□ 1.01
PTPN21-208ENST00000556564 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
PTPN21-208ENST00000556564 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
PTPN21-208ENST00000556564 MARCH6O60337 910 aa21.34■■□□□ 1.01
PTPN21-208ENST00000556564 WDR62O43379 1518 aa21.34■■□□□ 1.01
PTPN21-208ENST00000556564 MYL6BP14649 208 aa21.34■■□□□ 1.01
PTPN21-208ENST00000556564 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
PTPN21-208ENST00000556564 TSR2Q969E8 191 aaKnown RBP21.33■■□□□ 1.01
PTPN21-208ENST00000556564 EXOSC9Q06265 439 aaKnown RBP21.33■■□□□ 1.01
PTPN21-208ENST00000556564 RBM19Q9Y4C8 960 aaKnown RBP21.33■■□□□ 1.01
PTPN21-208ENST00000556564 HTATSF1O43719 755 aaKnown RBP21.33■■□□□ 1
PTPN21-208ENST00000556564 MAP3K1Q13233 1512 aa21.33■■□□□ 1
PTPN21-208ENST00000556564 FYB1O15117 783 aa21.33■■□□□ 1
PTPN21-208ENST00000556564 NUP153P49790 1475 aaKnown RBP21.32■■□□□ 1
PTPN21-208ENST00000556564 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
PTPN21-208ENST00000556564 ST18O60284 1047 aa21.32■■□□□ 1
PTPN21-208ENST00000556564 TWISTNBQ3B726 338 aaPredicted RBP21.32■■□□□ 1
PTPN21-208ENST00000556564 PHF8Q9UPP1 1060 aa21.32■■□□□ 1
PTPN21-208ENST00000556564 ITSN2Q9NZM3 1697 aa21.32■■□□□ 1
PTPN21-208ENST00000556564 GBP4Q96PP9 640 aa21.32■■□□□ 1
PTPN21-208ENST00000556564 WDR97A6NE52 1622 aa21.32■■□□□ 1
PTPN21-208ENST00000556564 CCDC27Q2M243 656 aa21.31■■□□□ 1
PTPN21-208ENST00000556564 KCNH5Q8NCM2 988 aa21.31■■□□□ 1
PTPN21-208ENST00000556564 CTDP1Q9Y5B0 961 aaPredicted RBP21.31■■□□□ 1
PTPN21-208ENST00000556564 DCAF8L1A6NGE4 600 aa21.3■■□□□ 1
PTPN21-208ENST00000556564 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
PTPN21-208ENST00000556564 USHBP1Q8N6Y0 703 aa21.3■■□□□ 1
PTPN21-208ENST00000556564 NME9Q86XW9 330 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms