RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 ADGRB2O60241 1585 aa18.75■□□□□ 0.59
SRSF5-214ENST00000556436 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
SRSF5-214ENST00000556436 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
SRSF5-214ENST00000556436 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
SRSF5-214ENST00000556436 FMN2Q9NZ56 1722 aa18.73■□□□□ 0.59
SRSF5-214ENST00000556436 FBXO41Q8TF61 875 aa18.72■□□□□ 0.59
SRSF5-214ENST00000556436 MST1RQ04912 1400 aa18.72■□□□□ 0.59
SRSF5-214ENST00000556436 ROBO1Q9Y6N7 1651 aa18.7■□□□□ 0.58
SRSF5-214ENST00000556436 TOM1O60784 492 aa18.7■□□□□ 0.58
SRSF5-214ENST00000556436 POGKQ9P215 609 aa18.7■□□□□ 0.58
SRSF5-214ENST00000556436 CARD11Q9BXL7 1154 aa18.69■□□□□ 0.58
SRSF5-214ENST00000556436 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
SRSF5-214ENST00000556436 ATF3P18847 181 aa18.68■□□□□ 0.58
SRSF5-214ENST00000556436 PIP4K2BP78356 416 aa18.68■□□□□ 0.58
SRSF5-214ENST00000556436 CADPS2Q86UW7 1296 aa18.68■□□□□ 0.58
SRSF5-214ENST00000556436 HIRIP3Q9BW71 556 aaPredicted RBP18.67■□□□□ 0.58
SRSF5-214ENST00000556436 USP32Q8NFA0 1604 aa18.67■□□□□ 0.58
SRSF5-214ENST00000556436 C1orf167Q5SNV9 1468 aa18.66■□□□□ 0.58
SRSF5-214ENST00000556436 RGPD8O14715 1765 aaPredicted RBP18.66■□□□□ 0.58
SRSF5-214ENST00000556436 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
SRSF5-214ENST00000556436 CENPJQ9HC77 1338 aaPredicted RBP18.66■□□□□ 0.58
SRSF5-214ENST00000556436 TULP4Q9NRJ4 1543 aa18.65■□□□□ 0.58
SRSF5-214ENST00000556436 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
SRSF5-214ENST00000556436 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
SRSF5-214ENST00000556436 ILDR1Q86SU0 546 aaPredicted RBP18.64■□□□□ 0.57
SRSF5-214ENST00000556436 USP47Q96K76 1375 aa18.62■□□□□ 0.57
SRSF5-214ENST00000556436 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
SRSF5-214ENST00000556436 NHSL1Q5SYE7 1610 aa18.6■□□□□ 0.57
SRSF5-214ENST00000556436 BRINP3Q76B58 766 aa18.6■□□□□ 0.57
SRSF5-214ENST00000556436 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
SRSF5-214ENST00000556436 ATP7BP35670 1465 aa18.59■□□□□ 0.57
SRSF5-214ENST00000556436 PRR36Q9H6K5 1346 aa18.59■□□□□ 0.57
SRSF5-214ENST00000556436 AHDC1Q5TGY3 1603 aaPredicted RBP18.59■□□□□ 0.57
SRSF5-214ENST00000556436 ANKARQ7Z5J8 1434 aa18.58■□□□□ 0.57
SRSF5-214ENST00000556436 WASLO00401 505 aaPredicted RBP18.58■□□□□ 0.56
SRSF5-214ENST00000556436 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
SRSF5-214ENST00000556436 PHLPP1O60346 1717 aa18.57■□□□□ 0.56
SRSF5-214ENST00000556436 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
SRSF5-214ENST00000556436 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
SRSF5-214ENST00000556436 KIF1AQ12756 1690 aa18.57■□□□□ 0.56
SRSF5-214ENST00000556436 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
SRSF5-214ENST00000556436 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
SRSF5-214ENST00000556436 HSPA1LP34931 641 aa18.55■□□□□ 0.56
SRSF5-214ENST00000556436 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
SRSF5-214ENST00000556436 TESK2Q96S53 571 aa18.54■□□□□ 0.56
SRSF5-214ENST00000556436 DDX17Q92841 729 aaKnown RBP18.53■□□□□ 0.56
SRSF5-214ENST00000556436 ESCO1Q5FWF5 840 aa18.52■□□□□ 0.56
SRSF5-214ENST00000556436 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
SRSF5-214ENST00000556436 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
SRSF5-214ENST00000556436 PXDNQ92626 1479 aa18.5■□□□□ 0.55
SRSF5-214ENST00000556436 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
SRSF5-214ENST00000556436 SRPK2P78362 688 aaKnown RBP18.49■□□□□ 0.55
SRSF5-214ENST00000556436 DISP3Q9P2K9 1392 aa18.49■□□□□ 0.55
SRSF5-214ENST00000556436 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
SRSF5-214ENST00000556436 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
SRSF5-214ENST00000556436 PMFBP1Q8TBY8 1022 aa18.47■□□□□ 0.55
SRSF5-214ENST00000556436 TRPM3Q9HCF6 1732 aaPredicted RBP18.46■□□□□ 0.55
SRSF5-214ENST00000556436 PPIP5K1Q6PFW1 1433 aa18.46■□□□□ 0.55
SRSF5-214ENST00000556436 FOXO3O43524 673 aa18.45■□□□□ 0.54
SRSF5-214ENST00000556436 EIF4G2P78344 907 aaKnown RBP eCLIP18.45■□□□□ 0.54
SRSF5-214ENST00000556436 XPCQ01831 940 aaPredicted RBP18.45■□□□□ 0.54
SRSF5-214ENST00000556436 SOS2Q07890 1332 aaPredicted RBP18.44■□□□□ 0.54
SRSF5-214ENST00000556436 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
SRSF5-214ENST00000556436 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
SRSF5-214ENST00000556436 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
SRSF5-214ENST00000556436 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
SRSF5-214ENST00000556436 AKAP12Q02952 1782 aa18.42■□□□□ 0.54
SRSF5-214ENST00000556436 MYOM1P52179 1685 aa18.42■□□□□ 0.54
SRSF5-214ENST00000556436 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
SRSF5-214ENST00000556436 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
SRSF5-214ENST00000556436 ALS2Q96Q42 1657 aa18.4■□□□□ 0.54
SRSF5-214ENST00000556436 TMF1P82094 1093 aa18.39■□□□□ 0.53
SRSF5-214ENST00000556436 CABP1Q9NZU7 370 aa18.39■□□□□ 0.53
SRSF5-214ENST00000556436 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
SRSF5-214ENST00000556436 ACEP12821 1306 aa18.39■□□□□ 0.53
SRSF5-214ENST00000556436 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.53
SRSF5-214ENST00000556436 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
SRSF5-214ENST00000556436 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
SRSF5-214ENST00000556436 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
SRSF5-214ENST00000556436 PNPLA6Q8IY17 1366 aa18.38■□□□□ 0.53
SRSF5-214ENST00000556436 JCADQ9P266 1359 aa18.38■□□□□ 0.53
SRSF5-214ENST00000556436 COL22A1Q8NFW1 1626 aaPredicted RBP18.38■□□□□ 0.53
SRSF5-214ENST00000556436 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
SRSF5-214ENST00000556436 PUS7Q96PZ0 661 aaKnown RBP18.36■□□□□ 0.53
SRSF5-214ENST00000556436 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
SRSF5-214ENST00000556436 USP6P35125 1406 aa18.35■□□□□ 0.53
SRSF5-214ENST00000556436 SBNO1A3KN83 1393 aa18.35■□□□□ 0.53
SRSF5-214ENST00000556436 SPATA31A3Q5VYP0 1347 aa18.35■□□□□ 0.53
SRSF5-214ENST00000556436 PSME1Q06323 249 aa18.35■□□□□ 0.53
SRSF5-214ENST00000556436 LRP6O75581 1613 aa18.34■□□□□ 0.53
SRSF5-214ENST00000556436 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
SRSF5-214ENST00000556436 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
SRSF5-214ENST00000556436 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
SRSF5-214ENST00000556436 SLC12A5Q9H2X9 1139 aa18.34■□□□□ 0.53
SRSF5-214ENST00000556436 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
SRSF5-214ENST00000556436 CRYBG1Q9Y4K1 1723 aa18.33■□□□□ 0.52
SRSF5-214ENST00000556436 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
SRSF5-214ENST00000556436 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
SRSF5-214ENST00000556436 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
SRSF5-214ENST00000556436 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 241.1 ms