RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 ATF3P18847 181 aa28.87■■■□□ 2.21
RCCD1-205ENST00000556333 DLC1Q96QB1 1528 aa28.87■■■□□ 2.21
RCCD1-205ENST00000556333 NBPF8Q3BBV2 869 aa28.86■■■□□ 2.21
RCCD1-205ENST00000556333 POGKQ9P215 609 aa28.85■■■□□ 2.21
RCCD1-205ENST00000556333 PLEKHH1Q9ULM0 1364 aa28.85■■■□□ 2.21
RCCD1-205ENST00000556333 FAM135BQ49AJ0 1406 aa28.85■■■□□ 2.21
RCCD1-205ENST00000556333 SAFB2Q14151 953 aaKnown RBP eCLIP28.84■■■□□ 2.21
RCCD1-205ENST00000556333 ROCK2O75116 1388 aaKnown RBP28.84■■■□□ 2.21
RCCD1-205ENST00000556333 CADPS2Q86UW7 1296 aa28.83■■■□□ 2.21
RCCD1-205ENST00000556333 PRAM1Q96QH2 718 aa28.83■■■□□ 2.21
RCCD1-205ENST00000556333 SIRT1Q96EB6 747 aa28.82■■■□□ 2.2
RCCD1-205ENST00000556333 DCCP43146 1447 aa28.81■■■□□ 2.2
RCCD1-205ENST00000556333 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
RCCD1-205ENST00000556333 ROBO1Q9Y6N7 1651 aa28.79■■■□□ 2.2
RCCD1-205ENST00000556333 SLAIN2Q9P270 581 aa28.78■■■□□ 2.2
RCCD1-205ENST00000556333 CDC42BPGQ6DT37 1551 aa28.76■■■□□ 2.19
RCCD1-205ENST00000556333 RALGAPBQ86X10 1494 aa28.76■■■□□ 2.19
RCCD1-205ENST00000556333 QRICH2Q9H0J4 1663 aa28.73■■■□□ 2.19
RCCD1-205ENST00000556333 FMN2Q9NZ56 1722 aa28.72■■■□□ 2.19
RCCD1-205ENST00000556333 MINK1Q8N4C8 1332 aaPredicted RBP28.71■■■□□ 2.19
RCCD1-205ENST00000556333 MST1RQ04912 1400 aa28.71■■■□□ 2.19
RCCD1-205ENST00000556333 CARD11Q9BXL7 1154 aa28.71■■■□□ 2.19
RCCD1-205ENST00000556333 RGPD8O14715 1765 aaPredicted RBP28.7■■■□□ 2.19
RCCD1-205ENST00000556333 HIRIP3Q9BW71 556 aaPredicted RBP28.69■■■□□ 2.18
RCCD1-205ENST00000556333 ADGRB2O60241 1585 aa28.68■■■□□ 2.18
RCCD1-205ENST00000556333 GPRASP1Q5JY77 1395 aa28.67■■■□□ 2.18
RCCD1-205ENST00000556333 NUTM2FA1L443 756 aa28.67■■■□□ 2.18
RCCD1-205ENST00000556333 EIF3AQ14152 1382 aaKnown RBP28.66■■■□□ 2.18
RCCD1-205ENST00000556333 CENPJQ9HC77 1338 aaPredicted RBP28.66■■■□□ 2.18
RCCD1-205ENST00000556333 PHLPP1O60346 1717 aa28.65■■■□□ 2.18
RCCD1-205ENST00000556333 C1orf167Q5SNV9 1468 aa28.65■■■□□ 2.18
RCCD1-205ENST00000556333 BRINP3Q76B58 766 aa28.6■■■□□ 2.17
RCCD1-205ENST00000556333 ESCO1Q5FWF5 840 aa28.58■■■□□ 2.17
RCCD1-205ENST00000556333 WASLO00401 505 aaPredicted RBP28.57■■■□□ 2.16
RCCD1-205ENST00000556333 ORAI2Q96SN7 254 aa28.57■■■□□ 2.16
RCCD1-205ENST00000556333 RGS17Q9UGC6 210 aaPredicted RBP28.57■■■□□ 2.16
RCCD1-205ENST00000556333 NHSL1Q5SYE7 1610 aa28.57■■■□□ 2.16
RCCD1-205ENST00000556333 USP32Q8NFA0 1604 aa28.56■■■□□ 2.16
RCCD1-205ENST00000556333 ITSN1Q15811 1721 aa28.55■■■□□ 2.16
RCCD1-205ENST00000556333 TULP4Q9NRJ4 1543 aa28.54■■■□□ 2.16
RCCD1-205ENST00000556333 KIF1AQ12756 1690 aa28.54■■■□□ 2.16
RCCD1-205ENST00000556333 AHDC1Q5TGY3 1603 aaPredicted RBP28.53■■■□□ 2.16
RCCD1-205ENST00000556333 CDK19Q9BWU1 502 aa28.52■■■□□ 2.16
RCCD1-205ENST00000556333 ANKARQ7Z5J8 1434 aa28.51■■■□□ 2.15
RCCD1-205ENST00000556333 SRPK2P78362 688 aaKnown RBP28.49■■■□□ 2.15
RCCD1-205ENST00000556333 DDX17Q92841 729 aaKnown RBP28.49■■■□□ 2.15
RCCD1-205ENST00000556333 COL16A1Q07092 1604 aaPredicted RBP28.49■■■□□ 2.15
RCCD1-205ENST00000556333 USP47Q96K76 1375 aa28.48■■■□□ 2.15
RCCD1-205ENST00000556333 EVC2Q86UK5 1308 aa28.47■■■□□ 2.15
RCCD1-205ENST00000556333 PRR36Q9H6K5 1346 aa28.45■■■□□ 2.15
RCCD1-205ENST00000556333 ST20-MTHFSA0A0A6YYL1 179 aa28.45■■■□□ 2.14
RCCD1-205ENST00000556333 PHF8Q9UPP1 1060 aa28.45■■■□□ 2.14
RCCD1-205ENST00000556333 TOPAZ1Q8N9V7 1692 aa28.45■■■□□ 2.14
RCCD1-205ENST00000556333 NUDT16Q96DE0 195 aaKnown RBP28.44■■■□□ 2.14
RCCD1-205ENST00000556333 CABP2Q9NPB3 220 aa28.44■■■□□ 2.14
RCCD1-205ENST00000556333 ATP7BP35670 1465 aa28.44■■■□□ 2.14
RCCD1-205ENST00000556333 FOXO3O43524 673 aa28.43■■■□□ 2.14
RCCD1-205ENST00000556333 PMFBP1Q8TBY8 1022 aa28.43■■■□□ 2.14
RCCD1-205ENST00000556333 SBNO2Q9Y2G9 1366 aa28.42■■■□□ 2.14
RCCD1-205ENST00000556333 NPHP3Q7Z494 1330 aa28.42■■■□□ 2.14
RCCD1-205ENST00000556333 XPCQ01831 940 aaPredicted RBP28.39■■■□□ 2.14
RCCD1-205ENST00000556333 POTEAQ6S8J7 498 aa28.38■■■□□ 2.13
RCCD1-205ENST00000556333 SHPRHQ149N8 1683 aa28.36■■■□□ 2.13
RCCD1-205ENST00000556333 NGDNQ8NEJ9 315 aaKnown RBP28.36■■■□□ 2.13
RCCD1-205ENST00000556333 CCDC61Q9Y6R9 512 aa28.36■■■□□ 2.13
RCCD1-205ENST00000556333 PSME1Q06323 249 aa28.35■■■□□ 2.13
RCCD1-205ENST00000556333 LRRC59Q96AG4 307 aaKnown RBP28.35■■■□□ 2.13
RCCD1-205ENST00000556333 PPIP5K1Q6PFW1 1433 aa28.35■■■□□ 2.13
RCCD1-205ENST00000556333 PXDNQ92626 1479 aa28.34■■■□□ 2.13
RCCD1-205ENST00000556333 SOS2Q07890 1332 aaPredicted RBP28.34■■■□□ 2.13
RCCD1-205ENST00000556333 JCADQ9P266 1359 aa28.34■■■□□ 2.13
RCCD1-205ENST00000556333 SLC24A1O60721 1099 aa28.33■■■□□ 2.13
RCCD1-205ENST00000556333 EIF4G2P78344 907 aaKnown RBP eCLIP28.33■■■□□ 2.13
RCCD1-205ENST00000556333 KRT28Q7Z3Y7 464 aa28.33■■■□□ 2.13
RCCD1-205ENST00000556333 TESK2Q96S53 571 aa28.33■■■□□ 2.13
RCCD1-205ENST00000556333 ATAD2Q6PL18 1390 aa28.3■■■□□ 2.12
RCCD1-205ENST00000556333 TMF1P82094 1093 aa28.29■■■□□ 2.12
RCCD1-205ENST00000556333 HSPA5P11021 654 aaKnown RBP28.28■■■□□ 2.12
RCCD1-205ENST00000556333 TRPM3Q9HCF6 1732 aaPredicted RBP28.27■■■□□ 2.12
RCCD1-205ENST00000556333 ACEP12821 1306 aa28.27■■■□□ 2.12
RCCD1-205ENST00000556333 CABP1Q9NZU7 370 aa28.27■■■□□ 2.12
RCCD1-205ENST00000556333 PLEKHG3A1L390 1219 aa28.26■■■□□ 2.11
RCCD1-205ENST00000556333 AKAP12Q02952 1782 aa28.25■■■□□ 2.11
RCCD1-205ENST00000556333 LMOD2Q6P5Q4 547 aa28.24■■■□□ 2.11
RCCD1-205ENST00000556333 POLR3AO14802 1390 aaPredicted RBP28.24■■■□□ 2.11
RCCD1-205ENST00000556333 PNPLA6Q8IY17 1366 aa28.24■■■□□ 2.11
RCCD1-205ENST00000556333 PAK3O75914 559 aaPredicted RBP28.23■■■□□ 2.11
RCCD1-205ENST00000556333 TMC1Q8TDI8 760 aa28.23■■■□□ 2.11
RCCD1-205ENST00000556333 TNS3Q68CZ2 1445 aa28.22■■■□□ 2.11
RCCD1-205ENST00000556333 SBNO1A3KN83 1393 aa28.21■■■□□ 2.11
RCCD1-205ENST00000556333 COL22A1Q8NFW1 1626 aaPredicted RBP28.21■■■□□ 2.11
RCCD1-205ENST00000556333 SPATA31A6Q5VVP1 1343 aa28.2■■■□□ 2.11
RCCD1-205ENST00000556333 SPATA31A3Q5VYP0 1347 aa28.2■■■□□ 2.11
RCCD1-205ENST00000556333 ALS2Q96Q42 1657 aa28.2■■■□□ 2.11
RCCD1-205ENST00000556333 NUTM2BA6NNL0 878 aaPredicted RBP28.2■■■□□ 2.1
RCCD1-205ENST00000556333 NUTM2EB1AL46 878 aaPredicted RBP28.2■■■□□ 2.1
RCCD1-205ENST00000556333 NUTM2AQ8IVF1 878 aaPredicted RBP28.2■■■□□ 2.1
RCCD1-205ENST00000556333 CDCA8Q53HL2 280 aa28.19■■■□□ 2.1
RCCD1-205ENST00000556333 PUS7Q96PZ0 661 aaKnown RBP28.19■■■□□ 2.1
RCCD1-205ENST00000556333 PLEKHG5O94827 1062 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms