RNA–Protein interactions for RNA: ENST00000555881.5

COCH-209, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-209ENST00000555881 CDC42BPGQ6DT37 1551 aa31.32■■■□□ 2.6
COCH-209ENST00000555881 ATF3P18847 181 aa31.32■■■□□ 2.6
COCH-209ENST00000555881 PIP4K2BP78356 416 aa31.31■■■□□ 2.6
COCH-209ENST00000555881 PRAM1Q96QH2 718 aa31.3■■■□□ 2.6
COCH-209ENST00000555881 RALGAPBQ86X10 1494 aa31.29■■■□□ 2.6
COCH-209ENST00000555881 SCAF1Q9H7N4 1312 aaKnown RBP31.28■■■□□ 2.6
COCH-209ENST00000555881 ROCK2O75116 1388 aaKnown RBP31.28■■■□□ 2.6
COCH-209ENST00000555881 SLAIN2Q9P270 581 aa31.27■■■□□ 2.6
COCH-209ENST00000555881 GPRASP1Q5JY77 1395 aa31.27■■■□□ 2.6
COCH-209ENST00000555881 ROBO1Q9Y6N7 1651 aa31.26■■■□□ 2.6
COCH-209ENST00000555881 POGKQ9P215 609 aa31.26■■■□□ 2.59
COCH-209ENST00000555881 MST1RQ04912 1400 aa31.25■■■□□ 2.59
COCH-209ENST00000555881 ADGRB2O60241 1585 aa31.25■■■□□ 2.59
COCH-209ENST00000555881 SAFB2Q14151 953 aaKnown RBP eCLIP31.21■■■□□ 2.59
COCH-209ENST00000555881 FMN2Q9NZ56 1722 aa31.21■■■□□ 2.59
COCH-209ENST00000555881 C1orf167Q5SNV9 1468 aa31.17■■■□□ 2.58
COCH-209ENST00000555881 QRICH2Q9H0J4 1663 aa31.15■■■□□ 2.58
COCH-209ENST00000555881 MINK1Q8N4C8 1332 aaPredicted RBP31.13■■■□□ 2.57
COCH-209ENST00000555881 CARD11Q9BXL7 1154 aa31.12■■■□□ 2.57
COCH-209ENST00000555881 CENPJQ9HC77 1338 aaPredicted RBP31.12■■■□□ 2.57
COCH-209ENST00000555881 EIF3AQ14152 1382 aaKnown RBP31.12■■■□□ 2.57
COCH-209ENST00000555881 BRINP3Q76B58 766 aa31.11■■■□□ 2.57
COCH-209ENST00000555881 HSPA1LP34931 641 aa31.09■■■□□ 2.57
COCH-209ENST00000555881 HIRIP3Q9BW71 556 aaPredicted RBP31.09■■■□□ 2.57
COCH-209ENST00000555881 AHDC1Q5TGY3 1603 aaPredicted RBP31.09■■■□□ 2.57
COCH-209ENST00000555881 NHSL1Q5SYE7 1610 aa31.07■■■□□ 2.56
COCH-209ENST00000555881 PHLPP1O60346 1717 aa31.06■■■□□ 2.56
COCH-209ENST00000555881 USP32Q8NFA0 1604 aa31.06■■■□□ 2.56
COCH-209ENST00000555881 RGPD8O14715 1765 aaPredicted RBP31.05■■■□□ 2.56
COCH-209ENST00000555881 ANKARQ7Z5J8 1434 aa31.05■■■□□ 2.56
COCH-209ENST00000555881 TULP4Q9NRJ4 1543 aa31.04■■■□□ 2.56
COCH-209ENST00000555881 WASLO00401 505 aaPredicted RBP31.04■■■□□ 2.56
COCH-209ENST00000555881 NUTM2FA1L443 756 aa31.02■■■□□ 2.56
COCH-209ENST00000555881 ORAI2Q96SN7 254 aa31.02■■■□□ 2.56
COCH-209ENST00000555881 KIF1AQ12756 1690 aa31.01■■■□□ 2.55
COCH-209ENST00000555881 COL16A1Q07092 1604 aaPredicted RBP31.01■■■□□ 2.55
COCH-209ENST00000555881 SBNO2Q9Y2G9 1366 aa30.98■■■□□ 2.55
COCH-209ENST00000555881 ESCO1Q5FWF5 840 aa30.98■■■□□ 2.55
COCH-209ENST00000555881 ITSN1Q15811 1721 aa30.97■■■□□ 2.55
COCH-209ENST00000555881 ATP7BP35670 1465 aa30.96■■■□□ 2.55
COCH-209ENST00000555881 CDK19Q9BWU1 502 aa30.95■■■□□ 2.55
COCH-209ENST00000555881 PRR36Q9H6K5 1346 aa30.95■■■□□ 2.54
COCH-209ENST00000555881 TOPAZ1Q8N9V7 1692 aa30.93■■■□□ 2.54
COCH-209ENST00000555881 USP47Q96K76 1375 aa30.92■■■□□ 2.54
COCH-209ENST00000555881 PHF8Q9UPP1 1060 aa30.9■■■□□ 2.54
COCH-209ENST00000555881 EVC2Q86UK5 1308 aa30.9■■■□□ 2.54
COCH-209ENST00000555881 DDX17Q92841 729 aaKnown RBP30.89■■■□□ 2.54
COCH-209ENST00000555881 NPHP3Q7Z494 1330 aa30.89■■■□□ 2.54
COCH-209ENST00000555881 NUDT16Q96DE0 195 aaKnown RBP30.88■■■□□ 2.53
COCH-209ENST00000555881 SOS2Q07890 1332 aaPredicted RBP30.87■■■□□ 2.53
COCH-209ENST00000555881 PXDNQ92626 1479 aa30.87■■■□□ 2.53
COCH-209ENST00000555881 ST20-MTHFSA0A0A6YYL1 179 aa30.86■■■□□ 2.53
COCH-209ENST00000555881 SRPK2P78362 688 aaKnown RBP30.86■■■□□ 2.53
COCH-209ENST00000555881 FOXO3O43524 673 aa30.85■■■□□ 2.53
COCH-209ENST00000555881 SHPRHQ149N8 1683 aa30.84■■■□□ 2.53
COCH-209ENST00000555881 JCADQ9P266 1359 aa30.83■■■□□ 2.53
COCH-209ENST00000555881 TESK2Q96S53 571 aa30.83■■■□□ 2.53
COCH-209ENST00000555881 CABP2Q9NPB3 220 aa30.83■■■□□ 2.53
COCH-209ENST00000555881 CCDC61Q9Y6R9 512 aa30.82■■■□□ 2.52
COCH-209ENST00000555881 PMFBP1Q8TBY8 1022 aa30.81■■■□□ 2.52
COCH-209ENST00000555881 LRRC59Q96AG4 307 aaKnown RBP30.8■■■□□ 2.52
COCH-209ENST00000555881 SLC24A1O60721 1099 aa30.78■■■□□ 2.52
COCH-209ENST00000555881 PPIP5K1Q6PFW1 1433 aa30.77■■■□□ 2.52
COCH-209ENST00000555881 XPCQ01831 940 aaPredicted RBP30.76■■■□□ 2.51
COCH-209ENST00000555881 ATAD2Q6PL18 1390 aa30.76■■■□□ 2.51
COCH-209ENST00000555881 PLEKHG3A1L390 1219 aa30.75■■■□□ 2.51
COCH-209ENST00000555881 KRT28Q7Z3Y7 464 aa30.75■■■□□ 2.51
COCH-209ENST00000555881 POLR3AO14802 1390 aaPredicted RBP30.75■■■□□ 2.51
COCH-209ENST00000555881 TRPM3Q9HCF6 1732 aaPredicted RBP30.74■■■□□ 2.51
COCH-209ENST00000555881 NGDNQ8NEJ9 315 aaKnown RBP30.73■■■□□ 2.51
COCH-209ENST00000555881 PNPLA6Q8IY17 1366 aa30.73■■■□□ 2.51
COCH-209ENST00000555881 PSME1Q06323 249 aa30.72■■■□□ 2.51
COCH-209ENST00000555881 PUS7Q96PZ0 661 aaKnown RBP30.72■■■□□ 2.51
COCH-209ENST00000555881 MED1Q15648 1581 aaPredicted RBP30.71■■■□□ 2.51
COCH-209ENST00000555881 SBNO1A3KN83 1393 aa30.71■■■□□ 2.51
COCH-209ENST00000555881 EIF4G2P78344 907 aaKnown RBP eCLIP30.71■■■□□ 2.51
COCH-209ENST00000555881 COL22A1Q8NFW1 1626 aaPredicted RBP30.71■■■□□ 2.51
COCH-209ENST00000555881 ACEP12821 1306 aa30.7■■■□□ 2.5
COCH-209ENST00000555881 SPATA31A6Q5VVP1 1343 aa30.7■■■□□ 2.5
COCH-209ENST00000555881 TNS3Q68CZ2 1445 aa30.69■■■□□ 2.5
COCH-209ENST00000555881 SPATA31A3Q5VYP0 1347 aa30.69■■■□□ 2.5
COCH-209ENST00000555881 DISP3Q9P2K9 1392 aa30.68■■■□□ 2.5
COCH-209ENST00000555881 TMF1P82094 1093 aa30.68■■■□□ 2.5
COCH-209ENST00000555881 CABP1Q9NZU7 370 aa30.68■■■□□ 2.5
COCH-209ENST00000555881 ALS2Q96Q42 1657 aa30.66■■■□□ 2.5
COCH-209ENST00000555881 HSPA5P11021 654 aaKnown RBP30.66■■■□□ 2.5
COCH-209ENST00000555881 AKAP12Q02952 1782 aa30.66■■■□□ 2.5
COCH-209ENST00000555881 LRP6O75581 1613 aa30.62■■■□□ 2.49
COCH-209ENST00000555881 ARHGEF10O15013 1369 aa30.61■■■□□ 2.49
COCH-209ENST00000555881 BRD4O60885 1362 aaPredicted RBP30.6■■■□□ 2.49
COCH-209ENST00000555881 USP6P35125 1406 aa30.59■■■□□ 2.49
COCH-209ENST00000555881 CPSF1Q10570 1443 aaKnown RBP30.59■■■□□ 2.49
COCH-209ENST00000555881 NINLQ9Y2I6 1382 aa30.59■■■□□ 2.49
COCH-209ENST00000555881 CDCA8Q53HL2 280 aa30.59■■■□□ 2.49
COCH-209ENST00000555881 MON2Q7Z3U7 1717 aa30.59■■■□□ 2.49
COCH-209ENST00000555881 CD163L1Q9NR16 1453 aa30.57■■■□□ 2.48
COCH-209ENST00000555881 ABCA3Q99758 1704 aa30.56■■■□□ 2.48
COCH-209ENST00000555881 NRKQ7Z2Y5 1582 aa30.55■■■□□ 2.48
COCH-209ENST00000555881 TMC1Q8TDI8 760 aa30.55■■■□□ 2.48
COCH-209ENST00000555881 PAK3O75914 559 aaPredicted RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms