RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 ARHGEF28Q8N1W1 1705 aaKnown RBP30.52■■■□□ 2.48
SDR39U1-208ENST00000554698 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.51■■■□□ 2.48
SDR39U1-208ENST00000554698 CADPS2Q86UW7 1296 aa30.5■■■□□ 2.47
SDR39U1-208ENST00000554698 FBXO41Q8TF61 875 aa30.5■■■□□ 2.47
SDR39U1-208ENST00000554698 CARD11Q9BXL7 1154 aa30.5■■■□□ 2.47
SDR39U1-208ENST00000554698 ATF3P18847 181 aa30.49■■■□□ 2.47
SDR39U1-208ENST00000554698 SAFB2Q14151 953 aaKnown RBP eCLIP30.48■■■□□ 2.47
SDR39U1-208ENST00000554698 CDC42BPGQ6DT37 1551 aa30.46■■■□□ 2.47
SDR39U1-208ENST00000554698 SLAIN2Q9P270 581 aa30.43■■■□□ 2.46
SDR39U1-208ENST00000554698 EIF3AQ14152 1382 aaKnown RBP30.43■■■□□ 2.46
SDR39U1-208ENST00000554698 CENPJQ9HC77 1338 aaPredicted RBP30.43■■■□□ 2.46
SDR39U1-208ENST00000554698 ADGRB2O60241 1585 aa30.42■■■□□ 2.46
SDR39U1-208ENST00000554698 MST1RQ04912 1400 aa30.42■■■□□ 2.46
SDR39U1-208ENST00000554698 MINK1Q8N4C8 1332 aaPredicted RBP30.4■■■□□ 2.46
SDR39U1-208ENST00000554698 PIP4K2BP78356 416 aa30.39■■■□□ 2.45
SDR39U1-208ENST00000554698 HIRIP3Q9BW71 556 aaPredicted RBP30.37■■■□□ 2.45
SDR39U1-208ENST00000554698 C1orf167Q5SNV9 1468 aa30.35■■■□□ 2.45
SDR39U1-208ENST00000554698 SCAF1Q9H7N4 1312 aaKnown RBP30.34■■■□□ 2.45
SDR39U1-208ENST00000554698 QRICH2Q9H0J4 1663 aa30.32■■■□□ 2.44
SDR39U1-208ENST00000554698 WASLO00401 505 aaPredicted RBP30.32■■■□□ 2.44
SDR39U1-208ENST00000554698 FMN2Q9NZ56 1722 aa30.31■■■□□ 2.44
SDR39U1-208ENST00000554698 USP47Q96K76 1375 aa30.31■■■□□ 2.44
SDR39U1-208ENST00000554698 SBNO2Q9Y2G9 1366 aa30.31■■■□□ 2.44
SDR39U1-208ENST00000554698 BRINP3Q76B58 766 aa30.28■■■□□ 2.44
SDR39U1-208ENST00000554698 ROBO1Q9Y6N7 1651 aa30.27■■■□□ 2.44
SDR39U1-208ENST00000554698 ANKARQ7Z5J8 1434 aa30.27■■■□□ 2.44
SDR39U1-208ENST00000554698 ILDR1Q86SU0 546 aaPredicted RBP30.27■■■□□ 2.44
SDR39U1-208ENST00000554698 ST20-MTHFSA0A0A6YYL1 179 aa30.26■■■□□ 2.43
SDR39U1-208ENST00000554698 NUTM2FA1L443 756 aa30.26■■■□□ 2.43
SDR39U1-208ENST00000554698 TULP4Q9NRJ4 1543 aa30.25■■■□□ 2.43
SDR39U1-208ENST00000554698 CDK19Q9BWU1 502 aa30.25■■■□□ 2.43
SDR39U1-208ENST00000554698 ORAI2Q96SN7 254 aa30.24■■■□□ 2.43
SDR39U1-208ENST00000554698 TESK2Q96S53 571 aa30.22■■■□□ 2.43
SDR39U1-208ENST00000554698 EVC2Q86UK5 1308 aa30.21■■■□□ 2.43
SDR39U1-208ENST00000554698 PRR36Q9H6K5 1346 aa30.21■■■□□ 2.43
SDR39U1-208ENST00000554698 USP32Q8NFA0 1604 aa30.21■■■□□ 2.43
SDR39U1-208ENST00000554698 ESCO1Q5FWF5 840 aa30.2■■■□□ 2.43
SDR39U1-208ENST00000554698 ATP7BP35670 1465 aa30.19■■■□□ 2.42
SDR39U1-208ENST00000554698 HSPA1LP34931 641 aa30.16■■■□□ 2.42
SDR39U1-208ENST00000554698 SRPK2P78362 688 aaKnown RBP30.16■■■□□ 2.42
SDR39U1-208ENST00000554698 NUDT16Q96DE0 195 aaKnown RBP30.16■■■□□ 2.42
SDR39U1-208ENST00000554698 SLC24A1O60721 1099 aa30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 EIF4G2P78344 907 aaKnown RBP eCLIP30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 AHDC1Q5TGY3 1603 aaPredicted RBP30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 CABP2Q9NPB3 220 aa30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 PHF8Q9UPP1 1060 aa30.13■■■□□ 2.41
SDR39U1-208ENST00000554698 CCDC61Q9Y6R9 512 aa30.12■■■□□ 2.41
SDR39U1-208ENST00000554698 HSPA5P11021 654 aaKnown RBP30.11■■■□□ 2.41
SDR39U1-208ENST00000554698 NHSL1Q5SYE7 1610 aa30.11■■■□□ 2.41
SDR39U1-208ENST00000554698 KIF1AQ12756 1690 aa30.1■■■□□ 2.41
SDR39U1-208ENST00000554698 RGPD8O14715 1765 aaPredicted RBP30.1■■■□□ 2.41
SDR39U1-208ENST00000554698 DDX17Q92841 729 aaKnown RBP30.09■■■□□ 2.41
SDR39U1-208ENST00000554698 TOPAZ1Q8N9V7 1692 aa30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 FOXO3O43524 673 aa30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 PUS7Q96PZ0 661 aaKnown RBP30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 NPHP3Q7Z494 1330 aa30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 ZEB1P37275 1124 aaPredicted RBP30.06■■■□□ 2.4
SDR39U1-208ENST00000554698 ATAD2Q6PL18 1390 aa30.06■■■□□ 2.4
SDR39U1-208ENST00000554698 DISP3Q9P2K9 1392 aa30.06■■■□□ 2.4
SDR39U1-208ENST00000554698 PHLPP1O60346 1717 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 ITSN1Q15811 1721 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 PLEKHG3A1L390 1219 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 TMF1P82094 1093 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 PMFBP1Q8TBY8 1022 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 SOS2Q07890 1332 aaPredicted RBP30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 COL16A1Q07092 1604 aaPredicted RBP30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 PPIP5K1Q6PFW1 1433 aa30.04■■■□□ 2.4
SDR39U1-208ENST00000554698 PXDNQ92626 1479 aa30.03■■■□□ 2.4
SDR39U1-208ENST00000554698 POLR3AO14802 1390 aaPredicted RBP30.02■■■□□ 2.4
SDR39U1-208ENST00000554698 CABP1Q9NZU7 370 aa30■■■□□ 2.39
SDR39U1-208ENST00000554698 NGDNQ8NEJ9 315 aaKnown RBP29.99■■■□□ 2.39
SDR39U1-208ENST00000554698 XPCQ01831 940 aaPredicted RBP29.98■■■□□ 2.39
SDR39U1-208ENST00000554698 ACEP12821 1306 aa29.97■■■□□ 2.39
SDR39U1-208ENST00000554698 CDCA8Q53HL2 280 aa29.97■■■□□ 2.39
SDR39U1-208ENST00000554698 KRT28Q7Z3Y7 464 aa29.97■■■□□ 2.39
SDR39U1-208ENST00000554698 PSME1Q06323 249 aa29.96■■■□□ 2.39
SDR39U1-208ENST00000554698 LRRC59Q96AG4 307 aaKnown RBP29.96■■■□□ 2.39
SDR39U1-208ENST00000554698 JCADQ9P266 1359 aa29.93■■■□□ 2.38
SDR39U1-208ENST00000554698 SBNO1A3KN83 1393 aa29.92■■■□□ 2.38
SDR39U1-208ENST00000554698 NINLQ9Y2I6 1382 aa29.91■■■□□ 2.38
SDR39U1-208ENST00000554698 SLC12A5Q9H2X9 1139 aa29.9■■■□□ 2.38
SDR39U1-208ENST00000554698 CPSF1Q10570 1443 aaKnown RBP29.89■■■□□ 2.38
SDR39U1-208ENST00000554698 SPATA31A3Q5VYP0 1347 aa29.89■■■□□ 2.38
SDR39U1-208ENST00000554698 TMC1Q8TDI8 760 aa29.89■■■□□ 2.37
SDR39U1-208ENST00000554698 PNPLA6Q8IY17 1366 aa29.88■■■□□ 2.37
SDR39U1-208ENST00000554698 CD163L1Q9NR16 1453 aa29.87■■■□□ 2.37
SDR39U1-208ENST00000554698 TNS3Q68CZ2 1445 aa29.87■■■□□ 2.37
SDR39U1-208ENST00000554698 TRPM3Q9HCF6 1732 aaPredicted RBP29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 USP6P35125 1406 aa29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 C11orf95C9JLR9 678 aaPredicted RBP29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 ZNF692Q9BU19 519 aaPredicted RBP29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 SHPRHQ149N8 1683 aa29.85■■■□□ 2.37
SDR39U1-208ENST00000554698 BRD4O60885 1362 aaPredicted RBP29.84■■■□□ 2.37
SDR39U1-208ENST00000554698 SSH2Q76I76 1423 aa29.83■■■□□ 2.37
SDR39U1-208ENST00000554698 TERF2IPQ9NYB0 399 aa29.82■■■□□ 2.36
SDR39U1-208ENST00000554698 SPATA31A6Q5VVP1 1343 aa29.81■■■□□ 2.36
SDR39U1-208ENST00000554698 ARHGEF10O15013 1369 aa29.81■■■□□ 2.36
SDR39U1-208ENST00000554698 HDGFL2Q7Z4V5 671 aaPredicted RBP29.8■■■□□ 2.36
SDR39U1-208ENST00000554698 A0A1W2PP64 1363 aa29.8■■■□□ 2.36
SDR39U1-208ENST00000554698 KTN1Q86UP2 1357 aaKnown RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms