RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 PSEN2P49810 448 aa7.62□□□□□ -1.19
PPP4R3A-204ENST00000554574 SNPHO15079 494 aa7.62□□□□□ -1.19
PPP4R3A-204ENST00000554574 WWC1Q8IX03 1113 aa7.62□□□□□ -1.19
PPP4R3A-204ENST00000554574 GLMNQ92990 594 aa7.62□□□□□ -1.19
PPP4R3A-204ENST00000554574 PRDM2Q13029 1718 aa7.61□□□□□ -1.19
PPP4R3A-204ENST00000554574 CALR3Q96L12 384 aaKnown RBP7.61□□□□□ -1.19
PPP4R3A-204ENST00000554574 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
PPP4R3A-204ENST00000554574 HMX1Q9NP08 348 aaPredicted RBP7.61□□□□□ -1.19
PPP4R3A-204ENST00000554574 SEPT9Q9UHD8 586 aaPredicted RBP7.61□□□□□ -1.19
PPP4R3A-204ENST00000554574 KCNH8Q96L42 1107 aa7.6□□□□□ -1.19
PPP4R3A-204ENST00000554574 IRF5Q13568 498 aa7.6□□□□□ -1.19
PPP4R3A-204ENST00000554574 RSPH4AQ5TD94 716 aa7.6□□□□□ -1.19
PPP4R3A-204ENST00000554574 ABCC8Q09428 1581 aa7.59□□□□□ -1.19
PPP4R3A-204ENST00000554574 ZBTB7CA1YPR0 619 aa7.59□□□□□ -1.19
PPP4R3A-204ENST00000554574 GPR37L1O60883 481 aa7.59□□□□□ -1.19
PPP4R3A-204ENST00000554574 CTDSPL2Q05D32 466 aa7.59□□□□□ -1.19
PPP4R3A-204ENST00000554574 RETREG2Q8NC44 543 aa7.59□□□□□ -1.19
PPP4R3A-204ENST00000554574 TRAIPQ9BWF2 469 aa7.59□□□□□ -1.19
PPP4R3A-204ENST00000554574 NDUFB9Q9Y6M9 179 aa7.59□□□□□ -1.19
PPP4R3A-204ENST00000554574 POTEEQ6S8J3 1075 aa7.58□□□□□ -1.2
PPP4R3A-204ENST00000554574 TRIM34Q9BYJ4 488 aa7.58□□□□□ -1.2
PPP4R3A-204ENST00000554574 RABGEF1Q9UJ41 708 aa7.58□□□□□ -1.2
PPP4R3A-204ENST00000554574 MTMR2Q13614 643 aa7.58□□□□□ -1.2
PPP4R3A-204ENST00000554574 ADAMTS19Q8TE59 1207 aa7.57□□□□□ -1.2
PPP4R3A-204ENST00000554574 FAM163AQ96GL9 167 aaPredicted RBP7.57□□□□□ -1.2
PPP4R3A-204ENST00000554574 CFAP99D6REC4 459 aa7.56□□□□□ -1.2
PPP4R3A-204ENST00000554574 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
PPP4R3A-204ENST00000554574 DMRTA1Q5VZB9 504 aa7.56□□□□□ -1.2
PPP4R3A-204ENST00000554574 LRRN4Q8WUT4 740 aa7.56□□□□□ -1.2
PPP4R3A-204ENST00000554574 FUT2Q10981 343 aa7.56□□□□□ -1.2
PPP4R3A-204ENST00000554574 TSC1Q92574 1164 aa7.56□□□□□ -1.2
PPP4R3A-204ENST00000554574 HELBQ8NG08 1087 aaPredicted RBP7.55□□□□□ -1.2
PPP4R3A-204ENST00000554574 AXIN2Q9Y2T1 843 aa7.55□□□□□ -1.2
PPP4R3A-204ENST00000554574 ARHGAP33O14559 1287 aa7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 CFHP08603 1231 aa7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 FAM98CQ17RN3 349 aaKnown RBP7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 SLC4A5Q9BY07 1137 aa7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 VARS2Q5ST30 1063 aaKnown RBP7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 HDGFL1Q5TGJ6 251 aa7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 SAMD7Q7Z3H4 446 aa7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 EPS8L1Q8TE68 723 aa7.54□□□□□ -1.2
PPP4R3A-204ENST00000554574 SYMPKQ92797 1274 aaKnown RBP7.53□□□□□ -1.2
PPP4R3A-204ENST00000554574 CFTRP13569 1480 aa7.53□□□□□ -1.2
PPP4R3A-204ENST00000554574 WRNQ14191 1432 aaPredicted RBP eCLIP7.53□□□□□ -1.2
PPP4R3A-204ENST00000554574 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.2
PPP4R3A-204ENST00000554574 HDGFP51858 240 aaKnown RBP7.52□□□□□ -1.2
PPP4R3A-204ENST00000554574 VAC14Q08AM6 782 aa7.52□□□□□ -1.2
PPP4R3A-204ENST00000554574 WASHC4Q2M389 1173 aa7.52□□□□□ -1.2
PPP4R3A-204ENST00000554574 SLF2Q8IX21 1173 aa7.52□□□□□ -1.2
PPP4R3A-204ENST00000554574 SYNJ1O43426 1573 aa7.52□□□□□ -1.21
PPP4R3A-204ENST00000554574 ERBB3P21860 1342 aa7.52□□□□□ -1.21
PPP4R3A-204ENST00000554574 VPS9D1Q9Y2B5 631 aa7.52□□□□□ -1.21
PPP4R3A-204ENST00000554574 BIVM-ERCC5R4GMW8 1640 aa7.51□□□□□ -1.21
PPP4R3A-204ENST00000554574 RNF40O75150 1001 aa7.51□□□□□ -1.21
PPP4R3A-204ENST00000554574 AEBP1Q8IUX7 1158 aa7.51□□□□□ -1.21
PPP4R3A-204ENST00000554574 KCTD17Q8N5Z5 321 aa7.51□□□□□ -1.21
PPP4R3A-204ENST00000554574 ATP6V1AP38606 617 aa7.5□□□□□ -1.21
PPP4R3A-204ENST00000554574 SLC4A3P48751 1232 aa7.5□□□□□ -1.21
PPP4R3A-204ENST00000554574 GRIPAP1Q4V328 841 aa7.5□□□□□ -1.21
PPP4R3A-204ENST00000554574 TOP2BQ02880 1626 aa7.5□□□□□ -1.21
PPP4R3A-204ENST00000554574 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
PPP4R3A-204ENST00000554574 PRR7Q8TB68 274 aa7.5□□□□□ -1.21
PPP4R3A-204ENST00000554574 CCDC9Q9Y3X0 531 aaKnown RBP7.5□□□□□ -1.21
PPP4R3A-204ENST00000554574 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.49□□□□□ -1.21
PPP4R3A-204ENST00000554574 PER1O15534 1290 aaPredicted RBP7.49□□□□□ -1.21
PPP4R3A-204ENST00000554574 RFX1P22670 979 aa7.49□□□□□ -1.21
PPP4R3A-204ENST00000554574 ALG2Q9H553 416 aa7.49□□□□□ -1.21
PPP4R3A-204ENST00000554574 NR6A1Q15406 480 aa7.48□□□□□ -1.21
PPP4R3A-204ENST00000554574 PBXIP1Q96AQ6 731 aa7.48□□□□□ -1.21
PPP4R3A-204ENST00000554574 EEA1Q15075 1411 aa7.48□□□□□ -1.21
PPP4R3A-204ENST00000554574 LOC105371045A0A1W2PR82 267 aa7.48□□□□□ -1.21
PPP4R3A-204ENST00000554574 PBX2P40425 430 aa7.48□□□□□ -1.21
PPP4R3A-204ENST00000554574 LAPTM4BQ86VI4 370 aa7.48□□□□□ -1.21
PPP4R3A-204ENST00000554574 PPP1R12CQ9BZL4 782 aa7.47□□□□□ -1.21
PPP4R3A-204ENST00000554574 ACIN1Q9UKV3 1341 aaKnown RBP7.47□□□□□ -1.21
PPP4R3A-204ENST00000554574 BHMG1C9JSJ3 638 aaPredicted RBP7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 SRPK2P78362 688 aaKnown RBP7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 PUS10Q3MIT2 529 aaKnown RBP7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 MORN1Q5T089 497 aa7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 ZFRQ96KR1 1074 aaKnown RBP7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 UCN2Q96RP3 112 aa7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 NBPF3Q9H094 633 aa7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 CADPSQ9ULU8 1353 aa7.46□□□□□ -1.21
PPP4R3A-204ENST00000554574 KMT5BQ4FZB7 885 aa7.46□□□□□ -1.22
PPP4R3A-204ENST00000554574 RETREG3Q86VR2 466 aa7.46□□□□□ -1.22
PPP4R3A-204ENST00000554574 SLC27A5Q9Y2P5 690 aa7.46□□□□□ -1.22
PPP4R3A-204ENST00000554574 RANGAP1P46060 587 aaPredicted RBP7.45□□□□□ -1.22
PPP4R3A-204ENST00000554574 FAM9AQ8IZU1 332 aaPredicted RBP7.45□□□□□ -1.22
PPP4R3A-204ENST00000554574 PALM3A6NDB9 673 aaPredicted RBP7.44□□□□□ -1.22
PPP4R3A-204ENST00000554574 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
PPP4R3A-204ENST00000554574 EMP3P54852 163 aa7.44□□□□□ -1.22
PPP4R3A-204ENST00000554574 ZNF687Q8N1G0 1237 aa7.44□□□□□ -1.22
PPP4R3A-204ENST00000554574 SOGA1O94964 1423 aa7.44□□□□□ -1.22
PPP4R3A-204ENST00000554574 CUX1P39880 1505 aa7.44□□□□□ -1.22
PPP4R3A-204ENST00000554574 LAMC3Q9Y6N6 1575 aa7.44□□□□□ -1.22
PPP4R3A-204ENST00000554574 ACTN4O43707 911 aaKnown RBP7.43□□□□□ -1.22
PPP4R3A-204ENST00000554574 ST18O60284 1047 aa7.43□□□□□ -1.22
PPP4R3A-204ENST00000554574 LMOD1P29536 600 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms