RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 PRR14Q9BWN1 585 aa8.17□□□□□ -1.1
PABPN1-204ENST00000554062 C3orf80F5H4A9 247 aa8.16□□□□□ -1.1
PABPN1-204ENST00000554062 PBXIP1Q96AQ6 731 aa8.15□□□□□ -1.1
PABPN1-204ENST00000554062 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
PABPN1-204ENST00000554062 C6orf229H3BNL8 230 aa8.14□□□□□ -1.11
PABPN1-204ENST00000554062 ATP6V1AP38606 617 aa8.14□□□□□ -1.11
PABPN1-204ENST00000554062 Q3C1V9 767 aa8.14□□□□□ -1.11
PABPN1-204ENST00000554062 USTQ9Y2C2 406 aa8.14□□□□□ -1.11
PABPN1-204ENST00000554062 CFHP08603 1231 aa8.13□□□□□ -1.11
PABPN1-204ENST00000554062 SLC10A3P09131 477 aa8.13□□□□□ -1.11
PABPN1-204ENST00000554062 RETREG2Q8NC44 543 aa8.13□□□□□ -1.11
PABPN1-204ENST00000554062 DESI1Q6ICB0 168 aa8.12□□□□□ -1.11
PABPN1-204ENST00000554062 TSC1Q92574 1164 aa8.12□□□□□ -1.11
PABPN1-204ENST00000554062 PCDHGC3Q9UN70 934 aa8.12□□□□□ -1.11
PABPN1-204ENST00000554062 ERBB3P21860 1342 aa8.11□□□□□ -1.11
PABPN1-204ENST00000554062 POM121CA8CG34 1229 aa8.11□□□□□ -1.11
PABPN1-204ENST00000554062 FUT2Q10981 343 aa8.11□□□□□ -1.11
PABPN1-204ENST00000554062 RETREG3Q86VR2 466 aa8.11□□□□□ -1.11
PABPN1-204ENST00000554062 ZNF592Q92610 1267 aa8.11□□□□□ -1.11
PABPN1-204ENST00000554062 PCDH10Q9P2E7 1040 aa8.11□□□□□ -1.11
PABPN1-204ENST00000554062 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
PABPN1-204ENST00000554062 CSB-PGBD3P0DP91 1061 aa8.1□□□□□ -1.11
PABPN1-204ENST00000554062 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
PABPN1-204ENST00000554062 IRF5Q13568 498 aa8.1□□□□□ -1.11
PABPN1-204ENST00000554062 HDGFL1Q5TGJ6 251 aa8.1□□□□□ -1.11
PABPN1-204ENST00000554062 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
PABPN1-204ENST00000554062 TK2O00142 265 aa8.08□□□□□ -1.12
PABPN1-204ENST00000554062 RNF40O75150 1001 aa8.08□□□□□ -1.12
PABPN1-204ENST00000554062 PSEN2P49810 448 aa8.08□□□□□ -1.12
PABPN1-204ENST00000554062 EIF4G2P78344 907 aaKnown RBP eCLIP8.08□□□□□ -1.12
PABPN1-204ENST00000554062 SAMD7Q7Z3H4 446 aa8.08□□□□□ -1.12
PABPN1-204ENST00000554062 NPM2Q86SE8 214 aaKnown RBP8.08□□□□□ -1.12
PABPN1-204ENST00000554062 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
PABPN1-204ENST00000554062 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
PABPN1-204ENST00000554062 VPS9D1Q9Y2B5 631 aa8.08□□□□□ -1.12
PABPN1-204ENST00000554062 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
PABPN1-204ENST00000554062 GUCA2AQ02747 115 aa8.07□□□□□ -1.12
PABPN1-204ENST00000554062 VARS2Q5ST30 1063 aaKnown RBP8.07□□□□□ -1.12
PABPN1-204ENST00000554062 PRR7Q8TB68 274 aa8.07□□□□□ -1.12
PABPN1-204ENST00000554062 LRCH3Q96II8 777 aa8.07□□□□□ -1.12
PABPN1-204ENST00000554062 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
PABPN1-204ENST00000554062 ACTN4O43707 911 aaKnown RBP8.06□□□□□ -1.12
PABPN1-204ENST00000554062 KCNA1Q09470 495 aa8.06□□□□□ -1.12
PABPN1-204ENST00000554062 SEMA3FQ13275 785 aa8.06□□□□□ -1.12
PABPN1-204ENST00000554062 ZC3H4Q9UPT8 1303 aaKnown RBP8.05□□□□□ -1.12
PABPN1-204ENST00000554062 BRD1O95696 1058 aa8.05□□□□□ -1.12
PABPN1-204ENST00000554062 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
PABPN1-204ENST00000554062 MRPL50Q8N5N7 158 aaKnown RBP8.05□□□□□ -1.12
PABPN1-204ENST00000554062 LRRN4Q8WUT4 740 aa8.05□□□□□ -1.12
PABPN1-204ENST00000554062 ALG2Q9H553 416 aa8.05□□□□□ -1.12
PABPN1-204ENST00000554062 SALL2Q9Y467 1007 aaPredicted RBP8.05□□□□□ -1.12
PABPN1-204ENST00000554062 VAC14Q08AM6 782 aa8.04□□□□□ -1.12
PABPN1-204ENST00000554062 MORN1Q5T089 497 aa8.04□□□□□ -1.12
PABPN1-204ENST00000554062 HLA-CQ95604 372 aa8.04□□□□□ -1.12
PABPN1-204ENST00000554062 ZFRQ96KR1 1074 aaKnown RBP8.04□□□□□ -1.12
PABPN1-204ENST00000554062 GPR37L1O60883 481 aa8.03□□□□□ -1.12
PABPN1-204ENST00000554062 EMP3P54852 163 aa8.03□□□□□ -1.12
PABPN1-204ENST00000554062 TMCO4Q5TGY1 634 aa8.03□□□□□ -1.12
PABPN1-204ENST00000554062 ZNF687Q8N1G0 1237 aa8.03□□□□□ -1.12
PABPN1-204ENST00000554062 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.03□□□□□ -1.12
PABPN1-204ENST00000554062 PALM3A6NDB9 673 aaPredicted RBP8.02□□□□□ -1.13
PABPN1-204ENST00000554062 CFAP70Q5T0N1 1121 aa8.02□□□□□ -1.13
PABPN1-204ENST00000554062 ADAMTS19Q8TE59 1207 aa8.02□□□□□ -1.13
PABPN1-204ENST00000554062 NR1H3Q13133 447 aa8.01□□□□□ -1.13
PABPN1-204ENST00000554062 DMRTA1Q5VZB9 504 aa8.01□□□□□ -1.13
PABPN1-204ENST00000554062 LYPD8Q6UX82 237 aa8.01□□□□□ -1.13
PABPN1-204ENST00000554062 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
PABPN1-204ENST00000554062 ANKK1Q8NFD2 765 aa8.01□□□□□ -1.13
PABPN1-204ENST00000554062 BHMG1C9JSJ3 638 aaPredicted RBP8□□□□□ -1.13
PABPN1-204ENST00000554062 ST18O60284 1047 aa8□□□□□ -1.13
PABPN1-204ENST00000554062 NR1I2O75469 434 aa8□□□□□ -1.13
PABPN1-204ENST00000554062 ATG7O95352 703 aa8□□□□□ -1.13
PABPN1-204ENST00000554062 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
PABPN1-204ENST00000554062 NR6A1Q15406 480 aa8□□□□□ -1.13
PABPN1-204ENST00000554062 STAC3Q96MF2 364 aa8□□□□□ -1.13
PABPN1-204ENST00000554062 USB1Q9BQ65 265 aaKnown RBP8□□□□□ -1.13
PABPN1-204ENST00000554062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.99□□□□□ -1.13
PABPN1-204ENST00000554062 GOLGA8CPA6NN73 597 aa7.99□□□□□ -1.13
PABPN1-204ENST00000554062 RFX1P22670 979 aa7.99□□□□□ -1.13
PABPN1-204ENST00000554062 LMOD1P29536 600 aaPredicted RBP7.99□□□□□ -1.13
PABPN1-204ENST00000554062 ARMC2Q8NEN0 867 aa7.99□□□□□ -1.13
PABPN1-204ENST00000554062 SLC27A5Q9Y2P5 690 aa7.99□□□□□ -1.13
PABPN1-204ENST00000554062 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
PABPN1-204ENST00000554062 ATP9BO43861 1147 aa7.98□□□□□ -1.13
PABPN1-204ENST00000554062 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
PABPN1-204ENST00000554062 CDAN1Q8IWY9 1227 aa7.98□□□□□ -1.13
PABPN1-204ENST00000554062 GPKOWQ92917 476 aaPredicted RBP eCLIP7.98□□□□□ -1.133e-11■□□□□ 10.3
PABPN1-204ENST00000554062 GPSM3Q9Y4H4 160 aa7.98□□□□□ -1.13
PABPN1-204ENST00000554062 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
PABPN1-204ENST00000554062 PPP4CP60510 307 aa7.97□□□□□ -1.13
PABPN1-204ENST00000554062 PTPRNQ16849 979 aa7.97□□□□□ -1.13
PABPN1-204ENST00000554062 TFIP11Q9UBB9 837 aaKnown RBP7.97□□□□□ -1.13
PABPN1-204ENST00000554062 FKBPLQ9UIM3 349 aa7.97□□□□□ -1.13
PABPN1-204ENST00000554062 AXIN2Q9Y2T1 843 aa7.97□□□□□ -1.13
PABPN1-204ENST00000554062 SRPK2P78362 688 aaKnown RBP7.96□□□□□ -1.14
PABPN1-204ENST00000554062 POTEEQ6S8J3 1075 aa7.96□□□□□ -1.14
PABPN1-204ENST00000554062 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.14
PABPN1-204ENST00000554062 UCN2Q96RP3 112 aa7.96□□□□□ -1.14
PABPN1-204ENST00000554062 PER1O15534 1290 aaPredicted RBP7.95□□□□□ -1.14
PABPN1-204ENST00000554062 JUNDP17535 347 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms