RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 NPHP1O15259 732 aa18.16■□□□□ 0.5
LINC00639-201ENST00000553932 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
LINC00639-201ENST00000553932 TSPY26PQ9H489 355 aa18.16■□□□□ 0.5
LINC00639-201ENST00000553932 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
LINC00639-201ENST00000553932 BECN2A8MW95 431 aa18.16■□□□□ 0.5
LINC00639-201ENST00000553932 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
LINC00639-201ENST00000553932 MBD3O95983 291 aa18.15■□□□□ 0.5
LINC00639-201ENST00000553932 ARHGAP5Q13017 1502 aa18.15■□□□□ 0.5
LINC00639-201ENST00000553932 ATP6V1DQ9Y5K8 247 aa18.15■□□□□ 0.5
LINC00639-201ENST00000553932 CIZ1Q9ULV3 898 aaPredicted RBP18.13■□□□□ 0.49
LINC00639-201ENST00000553932 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
LINC00639-201ENST00000553932 ELL2O00472 640 aaPredicted RBP18.13■□□□□ 0.49
LINC00639-201ENST00000553932 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
LINC00639-201ENST00000553932 SPC24Q8NBT2 197 aa18.13■□□□□ 0.49
LINC00639-201ENST00000553932 DYNC1I1O14576 645 aa18.12■□□□□ 0.49
LINC00639-201ENST00000553932 REC8O95072 547 aa18.12■□□□□ 0.49
LINC00639-201ENST00000553932 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
LINC00639-201ENST00000553932 SPDYE4A6NLX3 237 aa18.12■□□□□ 0.49
LINC00639-201ENST00000553932 TRERF1Q96PN7 1200 aa18.11■□□□□ 0.49
LINC00639-201ENST00000553932 SOX12O15370 315 aa18.11■□□□□ 0.49
LINC00639-201ENST00000553932 TPM4P67936 248 aa18.11■□□□□ 0.49
LINC00639-201ENST00000553932 TPD52L1Q16890 204 aaPredicted RBP18.11■□□□□ 0.49
LINC00639-201ENST00000553932 PPP4R3BQ5MIZ7 849 aa18.11■□□□□ 0.49
LINC00639-201ENST00000553932 KIAA1107Q9UPP5 1409 aa18.1■□□□□ 0.49
LINC00639-201ENST00000553932 AAMPQ13685 434 aa18.1■□□□□ 0.49
LINC00639-201ENST00000553932 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
LINC00639-201ENST00000553932 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
LINC00639-201ENST00000553932 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
LINC00639-201ENST00000553932 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
LINC00639-201ENST00000553932 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
LINC00639-201ENST00000553932 RILPL2Q969X0 211 aa18.09■□□□□ 0.49
LINC00639-201ENST00000553932 ARGLU1Q9NWB6 273 aaPredicted RBP18.09■□□□□ 0.49
LINC00639-201ENST00000553932 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
LINC00639-201ENST00000553932 ANKRD30BQ9BXX2 1392 aa18.08■□□□□ 0.49
LINC00639-201ENST00000553932 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.08■□□□□ 0.48
LINC00639-201ENST00000553932 SYCE3A1L190 88 aa18.08■□□□□ 0.48
LINC00639-201ENST00000553932 HMMRO75330 724 aa18.08■□□□□ 0.48
LINC00639-201ENST00000553932 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
LINC00639-201ENST00000553932 CCDC112Q8NEF3 446 aa18.07■□□□□ 0.48
LINC00639-201ENST00000553932 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
LINC00639-201ENST00000553932 TPM3P06753 285 aa18.06■□□□□ 0.48
LINC00639-201ENST00000553932 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
LINC00639-201ENST00000553932 HAP1P54257 671 aaPredicted RBP18.06■□□□□ 0.48
LINC00639-201ENST00000553932 PLCD3Q8N3E9 789 aa18.06■□□□□ 0.48
LINC00639-201ENST00000553932 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
LINC00639-201ENST00000553932 MNS1Q8NEH6 495 aa18.06■□□□□ 0.48
LINC00639-201ENST00000553932 CWC15Q9P013 229 aaKnown RBP18.06■□□□□ 0.48
LINC00639-201ENST00000553932 CDC45O75419 566 aa18.05■□□□□ 0.48
LINC00639-201ENST00000553932 CHMP4AQ9BY43 222 aa18.05■□□□□ 0.48
LINC00639-201ENST00000553932 NCOA1Q15788 1441 aa18.05■□□□□ 0.48
LINC00639-201ENST00000553932 SLC4A10Q6U841 1118 aa18.05■□□□□ 0.48
LINC00639-201ENST00000553932 TRIM5Q9C035 493 aa18.05■□□□□ 0.48
LINC00639-201ENST00000553932 IGSF3O75054 1194 aa18.04■□□□□ 0.48
LINC00639-201ENST00000553932 C8orf34Q49A92 452 aa18.04■□□□□ 0.48
LINC00639-201ENST00000553932 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
LINC00639-201ENST00000553932 CFAP70Q5T0N1 1121 aa18.04■□□□□ 0.48
LINC00639-201ENST00000553932 OFD1O75665 1012 aa18.04■□□□□ 0.48
LINC00639-201ENST00000553932 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
LINC00639-201ENST00000553932 TMEM132EQ6IEE7 984 aa18.04■□□□□ 0.48
LINC00639-201ENST00000553932 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
LINC00639-201ENST00000553932 NUP153P49790 1475 aaKnown RBP18.04■□□□□ 0.48
LINC00639-201ENST00000553932 ANO2Q9NQ90 1003 aa18.04■□□□□ 0.48
LINC00639-201ENST00000553932 VPS37CA5D8V6 355 aaPredicted RBP18.03■□□□□ 0.48
LINC00639-201ENST00000553932 SCAPERQ9BY12 1400 aa18.03■□□□□ 0.48
LINC00639-201ENST00000553932 RABEP1Q15276 862 aa18.02■□□□□ 0.48
LINC00639-201ENST00000553932 SSFA2P28290 1259 aa18.02■□□□□ 0.48
LINC00639-201ENST00000553932 NEK4P51957 841 aa18.01■□□□□ 0.47
LINC00639-201ENST00000553932 SMAP1Q8IYB5 467 aaPredicted RBP18.01■□□□□ 0.47
LINC00639-201ENST00000553932 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
LINC00639-201ENST00000553932 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
LINC00639-201ENST00000553932 NOC3LQ8WTT2 800 aaKnown RBP18■□□□□ 0.47
LINC00639-201ENST00000553932 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
LINC00639-201ENST00000553932 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
LINC00639-201ENST00000553932 GORABQ5T7V8 394 aa17.99■□□□□ 0.47
LINC00639-201ENST00000553932 TBC1D32Q96NH3 1257 aa17.99■□□□□ 0.47
LINC00639-201ENST00000553932 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
LINC00639-201ENST00000553932 GPATCH8Q9UKJ3 1502 aaKnown RBP17.99■□□□□ 0.47
LINC00639-201ENST00000553932 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
LINC00639-201ENST00000553932 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
LINC00639-201ENST00000553932 FIBPO43427 364 aa17.98■□□□□ 0.47
LINC00639-201ENST00000553932 PPP2R1AP30153 589 aa17.98■□□□□ 0.47
LINC00639-201ENST00000553932 SMC3Q9UQE7 1217 aa17.98■□□□□ 0.47
LINC00639-201ENST00000553932 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
LINC00639-201ENST00000553932 FBXW7Q969H0 707 aa17.98■□□□□ 0.47
LINC00639-201ENST00000553932 SF3A1Q15459 793 aaKnown RBP17.97■□□□□ 0.47
LINC00639-201ENST00000553932 CCDC94Q9BW85 323 aaPredicted RBP17.97■□□□□ 0.47
LINC00639-201ENST00000553932 CWC22Q9HCG8 908 aaKnown RBP17.97■□□□□ 0.47
LINC00639-201ENST00000553932 MCM5P33992 734 aa17.97■□□□□ 0.47
LINC00639-201ENST00000553932 RUNDC1Q96C34 613 aa17.97■□□□□ 0.47
LINC00639-201ENST00000553932 CALCOCO1Q9P1Z2 691 aa17.97■□□□□ 0.47
LINC00639-201ENST00000553932 ATP10BO94823 1461 aa17.96■□□□□ 0.47
LINC00639-201ENST00000553932 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
LINC00639-201ENST00000553932 H3BQV1 296 aa17.95■□□□□ 0.46
LINC00639-201ENST00000553932 HSP90B2PQ58FF3 399 aa17.95■□□□□ 0.46
LINC00639-201ENST00000553932 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
LINC00639-201ENST00000553932 MINK1Q8N4C8 1332 aaPredicted RBP17.94■□□□□ 0.46
LINC00639-201ENST00000553932 IGHDP01880 384 aa17.94■□□□□ 0.46
LINC00639-201ENST00000553932 GTPBP4Q9BZE4 634 aaKnown RBP17.94■□□□□ 0.46
LINC00639-201ENST00000553932 SKIDA1Q1XH10 827 aa17.94■□□□□ 0.46
LINC00639-201ENST00000553932 TCP11L2Q8N4U5 519 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms