RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
CCNK-203ENST00000553865 NEO1Q92859 1461 aa11.24□□□□□ -0.61
CCNK-203ENST00000553865 KDM5BQ9UGL1 1544 aa11.24□□□□□ -0.61
CCNK-203ENST00000553865 AAMPQ13685 434 aa11.24□□□□□ -0.61
CCNK-203ENST00000553865 COG3Q96JB2 828 aa11.24□□□□□ -0.61
CCNK-203ENST00000553865 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
CCNK-203ENST00000553865 AMPHP49418 695 aa11.23□□□□□ -0.61
CCNK-203ENST00000553865 RRP12Q5JTH9 1297 aaKnown RBP11.23□□□□□ -0.61
CCNK-203ENST00000553865 GORABQ5T7V8 394 aa11.23□□□□□ -0.61
CCNK-203ENST00000553865 A2MP01023 1474 aa11.23□□□□□ -0.61
CCNK-203ENST00000553865 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
CCNK-203ENST00000553865 MYO5CQ9NQX4 1742 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 MAPKBP1O60336 1514 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 ARHGEF12Q9NZN5 1544 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
CCNK-203ENST00000553865 PDE4CQ08493 712 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 TEX35Q5T0J7 233 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 ADCY10Q96PN6 1610 aa11.22□□□□□ -0.61
CCNK-203ENST00000553865 ST18O60284 1047 aa11.21□□□□□ -0.61
CCNK-203ENST00000553865 CCDC70Q6NSX1 233 aa11.21□□□□□ -0.61
CCNK-203ENST00000553865 ARAP3Q8WWN8 1544 aa11.21□□□□□ -0.61
CCNK-203ENST00000553865 THEMISQ8N1K5 641 aaPredicted RBP11.21□□□□□ -0.61
CCNK-203ENST00000553865 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.62
CCNK-203ENST00000553865 DIAPH1O60610 1272 aaKnown RBP11.21□□□□□ -0.62
CCNK-203ENST00000553865 APPP05067 770 aa11.21□□□□□ -0.62
CCNK-203ENST00000553865 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.62
CCNK-203ENST00000553865 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.62
CCNK-203ENST00000553865 COG6Q9Y2V7 657 aa11.21□□□□□ -0.62
CCNK-203ENST00000553865 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
CCNK-203ENST00000553865 KIF3AQ9Y496 699 aa11.2□□□□□ -0.62
CCNK-203ENST00000553865 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
CCNK-203ENST00000553865 CHMP4CQ96CF2 233 aa11.19□□□□□ -0.62
CCNK-203ENST00000553865 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
CCNK-203ENST00000553865 MINK1Q8N4C8 1332 aaPredicted RBP11.19□□□□□ -0.62
CCNK-203ENST00000553865 DZIP1LQ8IYY4 767 aaKnown RBP11.18□□□□□ -0.62
CCNK-203ENST00000553865 ZNF330Q9Y3S2 320 aaPredicted RBP11.18□□□□□ -0.62
CCNK-203ENST00000553865 HSP90B1P14625 803 aaKnown RBP11.18□□□□□ -0.62
CCNK-203ENST00000553865 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
CCNK-203ENST00000553865 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
CCNK-203ENST00000553865 ANKRD45Q5TZF3 282 aa11.17□□□□□ -0.62
CCNK-203ENST00000553865 API5Q9BZZ5 524 aaKnown RBP11.17□□□□□ -0.62
CCNK-203ENST00000553865 CHMP3Q9Y3E7 222 aa11.17□□□□□ -0.62
CCNK-203ENST00000553865 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
CCNK-203ENST00000553865 NINLQ9Y2I6 1382 aa11.17□□□□□ -0.62
CCNK-203ENST00000553865 ATP7AQ04656 1500 aa11.17□□□□□ -0.62
CCNK-203ENST00000553865 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
CCNK-203ENST00000553865 CCAR2Q8N163 923 aaKnown RBP11.17□□□□□ -0.62
CCNK-203ENST00000553865 RALGAPBQ86X10 1494 aa11.16□□□□□ -0.62
CCNK-203ENST00000553865 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
CCNK-203ENST00000553865 MAST1Q9Y2H9 1570 aa11.16□□□□□ -0.62
CCNK-203ENST00000553865 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
CCNK-203ENST00000553865 RIPK4P57078 832 aa11.16□□□□□ -0.62
CCNK-203ENST00000553865 SKOR2Q2VWA4 1001 aaPredicted RBP11.15□□□□□ -0.62
CCNK-203ENST00000553865 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
CCNK-203ENST00000553865 RASSF8Q8NHQ8 419 aa11.15□□□□□ -0.62
CCNK-203ENST00000553865 CREBRFQ8IUR6 639 aa11.15□□□□□ -0.62
CCNK-203ENST00000553865 SCAF11Q99590 1463 aaKnown RBP11.15□□□□□ -0.63
CCNK-203ENST00000553865 GSE1Q14687 1217 aa11.14□□□□□ -0.63
CCNK-203ENST00000553865 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
CCNK-203ENST00000553865 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
CCNK-203ENST00000553865 ELL2O00472 640 aaPredicted RBP11.13□□□□□ -0.63
CCNK-203ENST00000553865 GNAI1P63096 354 aa11.13□□□□□ -0.63
CCNK-203ENST00000553865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCNK-203ENST00000553865 TRAPPC8Q9Y2L5 1435 aa11.13□□□□□ -0.63
CCNK-203ENST00000553865 TPM1P09493 284 aa11.13□□□□□ -0.63
CCNK-203ENST00000553865 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
CCNK-203ENST00000553865 CDR1P51861 262 aa11.12□□□□□ -0.63
CCNK-203ENST00000553865 LTV1Q96GA3 475 aaPredicted RBP11.12□□□□□ -0.63
CCNK-203ENST00000553865 MAGI3Q5TCQ9 1506 aa11.12□□□□□ -0.63
CCNK-203ENST00000553865 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
CCNK-203ENST00000553865 ZCCHC11Q5TAX3 1644 aaKnown RBP11.12□□□□□ -0.63
CCNK-203ENST00000553865 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
CCNK-203ENST00000553865 GOLGA6L19H0YKK7 550 aa11.12□□□□□ -0.63
CCNK-203ENST00000553865 REC8O95072 547 aa11.12□□□□□ -0.63
CCNK-203ENST00000553865 CCDC9Q9Y3X0 531 aaKnown RBP11.12□□□□□ -0.63
CCNK-203ENST00000553865 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
CCNK-203ENST00000553865 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
CCNK-203ENST00000553865 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
CCNK-203ENST00000553865 CFAP70Q5T0N1 1121 aa11.11□□□□□ -0.63
CCNK-203ENST00000553865 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
CCNK-203ENST00000553865 C1orf141Q5JVX7 400 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 PNISRQ8TF01 805 aaKnown RBP11.1□□□□□ -0.63
CCNK-203ENST00000553865 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
CCNK-203ENST00000553865 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
CCNK-203ENST00000553865 FAM13BQ9NYF5 915 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
CCNK-203ENST00000553865 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 NSD2O96028 1365 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 TPM2P07951 284 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 ACBD3Q9H3P7 528 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 G3V3G9 751 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
CCNK-203ENST00000553865 ATP10AO60312 1499 aa11.09□□□□□ -0.63
CCNK-203ENST00000553865 CHMP5Q9NZZ3 219 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms