RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 SMPD1P17405 629 aa10.74□□□□□ -0.69
LETMD1-237ENST00000553175 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
LETMD1-237ENST00000553175 MMP16P51512 607 aa10.73□□□□□ -0.69
LETMD1-237ENST00000553175 ZBTB24O43167 697 aaPredicted RBP10.72□□□□□ -0.69
LETMD1-237ENST00000553175 WFS1O76024 890 aa10.72□□□□□ -0.69
LETMD1-237ENST00000553175 SNIP1Q8TAD8 396 aaKnown RBP10.72□□□□□ -0.69
LETMD1-237ENST00000553175 TTC24A2A3L6 582 aaPredicted RBP10.71□□□□□ -0.69
LETMD1-237ENST00000553175 TRIM32Q13049 653 aa10.7□□□□□ -0.7
LETMD1-237ENST00000553175 LCE2CQ5TA81 110 aa10.7□□□□□ -0.7
LETMD1-237ENST00000553175 CD46P15529 392 aa10.69□□□□□ -0.7
LETMD1-237ENST00000553175 MRGPRX2Q96LB1 330 aa10.69□□□□□ -0.7
LETMD1-237ENST00000553175 J3QL48 77 aa10.68□□□□□ -0.7
LETMD1-237ENST00000553175 GRIPAP1Q4V328 841 aa10.68□□□□□ -0.7
LETMD1-237ENST00000553175 ATP13A2Q9NQ11 1180 aa10.68□□□□□ -0.7
LETMD1-237ENST00000553175 WIPF1O43516 503 aa10.67□□□□□ -0.7
LETMD1-237ENST00000553175 DXOO77932 396 aaKnown RBP10.67□□□□□ -0.7
LETMD1-237ENST00000553175 SNRPBP14678 240 aaKnown RBP10.67□□□□□ -0.7
LETMD1-237ENST00000553175 Q3C1V9 767 aa10.67□□□□□ -0.7
LETMD1-237ENST00000553175 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
LETMD1-237ENST00000553175 GPIHBP1Q8IV16 184 aa10.64□□□□□ -0.71
LETMD1-237ENST00000553175 HPS1Q92902 700 aa10.64□□□□□ -0.71
LETMD1-237ENST00000553175 HLA-CQ95604 372 aa10.64□□□□□ -0.71
LETMD1-237ENST00000553175 KDM4AO75164 1064 aa10.63□□□□□ -0.71
LETMD1-237ENST00000553175 SKOR1P84550 965 aa10.63□□□□□ -0.71
LETMD1-237ENST00000553175 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
LETMD1-237ENST00000553175 TERTO14746 1132 aaKnown RBP10.6□□□□□ -0.71
LETMD1-237ENST00000553175 RC3H1Q5TC82 1133 aaKnown RBP10.6□□□□□ -0.71
LETMD1-237ENST00000553175 STK17AQ9UEE5 414 aa10.59□□□□□ -0.71
LETMD1-237ENST00000553175 MAP2K5Q13163 448 aa10.58□□□□□ -0.72
LETMD1-237ENST00000553175 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
LETMD1-237ENST00000553175 IRF6O14896 467 aa10.57□□□□□ -0.72
LETMD1-237ENST00000553175 WNT7BP56706 349 aa10.57□□□□□ -0.72
LETMD1-237ENST00000553175 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
LETMD1-237ENST00000553175 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
LETMD1-237ENST00000553175 HOXA2O43364 376 aa10.56□□□□□ -0.72
LETMD1-237ENST00000553175 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
LETMD1-237ENST00000553175 USP46P62068 366 aa10.55□□□□□ -0.72
LETMD1-237ENST00000553175 SIAH2O43255 324 aa10.54□□□□□ -0.72
LETMD1-237ENST00000553175 MDM2Q00987 491 aaPredicted RBP10.54□□□□□ -0.72
LETMD1-237ENST00000553175 INSM1Q01101 510 aaPredicted RBP10.54□□□□□ -0.72
LETMD1-237ENST00000553175 GUCA2AQ02747 115 aa10.54□□□□□ -0.72
LETMD1-237ENST00000553175 SYMPKQ92797 1274 aaKnown RBP10.54□□□□□ -0.72
LETMD1-237ENST00000553175 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
LETMD1-237ENST00000553175 JUNDP17535 347 aa10.52□□□□□ -0.73
LETMD1-237ENST00000553175 KIFC2Q96AC6 838 aa10.52□□□□□ -0.73
LETMD1-237ENST00000553175 MINK1Q8N4C8 1332 aaPredicted RBP10.51□□□□□ -0.73
LETMD1-237ENST00000553175 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
LETMD1-237ENST00000553175 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
LETMD1-237ENST00000553175 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
LETMD1-237ENST00000553175 TRIM46Q7Z4K8 759 aa10.47□□□□□ -0.73
LETMD1-237ENST00000553175 LORP23490 312 aaPredicted RBP10.46□□□□□ -0.73
LETMD1-237ENST00000553175 PCDHGC3Q9UN70 934 aa10.46□□□□□ -0.73
LETMD1-237ENST00000553175 RETREG3Q86VR2 466 aa10.45□□□□□ -0.74
LETMD1-237ENST00000553175 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
LETMD1-237ENST00000553175 NUDT12Q9BQG2 462 aa10.45□□□□□ -0.74
LETMD1-237ENST00000553175 GPCPD1Q9NPB8 672 aa10.45□□□□□ -0.74
LETMD1-237ENST00000553175 SH3BP2P78314 561 aa10.44□□□□□ -0.74
LETMD1-237ENST00000553175 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
LETMD1-237ENST00000553175 BMP1P13497 986 aa10.42□□□□□ -0.74
LETMD1-237ENST00000553175 CLCN1P35523 988 aa10.42□□□□□ -0.74
LETMD1-237ENST00000553175 EHBP1Q8NDI1 1231 aa10.42□□□□□ -0.74
LETMD1-237ENST00000553175 CAPN5O15484 640 aaPredicted RBP10.41□□□□□ -0.74
LETMD1-237ENST00000553175 GMPRP36959 345 aa10.4□□□□□ -0.74
LETMD1-237ENST00000553175 FDX1P10109 184 aa10.39□□□□□ -0.75
LETMD1-237ENST00000553175 NUTM1Q86Y26 1132 aa10.39□□□□□ -0.75
LETMD1-237ENST00000553175 NPAS3Q8IXF0 933 aa10.39□□□□□ -0.75
LETMD1-237ENST00000553175 SLC16A10Q8TF71 515 aa10.39□□□□□ -0.75
LETMD1-237ENST00000553175 EVA1BQ9NVM1 165 aa10.38□□□□□ -0.75
LETMD1-237ENST00000553175 CCNYL3P0C7X3 344 aa10.37□□□□□ -0.75
LETMD1-237ENST00000553175 WASF2Q9Y6W5 498 aa10.37□□□□□ -0.75
LETMD1-237ENST00000553175 MS4A1P11836 297 aa10.36□□□□□ -0.75
LETMD1-237ENST00000553175 H3BM21 787 aa10.35□□□□□ -0.75
LETMD1-237ENST00000553175 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
LETMD1-237ENST00000553175 VEGFBP49765 207 aa10.35□□□□□ -0.75
LETMD1-237ENST00000553175 PTPRNQ16849 979 aa10.35□□□□□ -0.75
LETMD1-237ENST00000553175 SPIRE2Q8WWL2 714 aa10.35□□□□□ -0.75
LETMD1-237ENST00000553175 BAP1Q92560 729 aa10.35□□□□□ -0.75
LETMD1-237ENST00000553175 UNC93B1Q9H1C4 597 aa10.35□□□□□ -0.75
LETMD1-237ENST00000553175 ERBB4Q15303 1308 aa10.34□□□□□ -0.75
LETMD1-237ENST00000553175 NDUFV2P19404 249 aa10.34□□□□□ -0.75
LETMD1-237ENST00000553175 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
LETMD1-237ENST00000553175 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
LETMD1-237ENST00000553175 SSTR3P32745 418 aaPredicted RBP10.33□□□□□ -0.76
LETMD1-237ENST00000553175 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
LETMD1-237ENST00000553175 MPNDQ8N594 471 aa10.33□□□□□ -0.76
LETMD1-237ENST00000553175 IRF7Q92985 503 aa10.33□□□□□ -0.76
LETMD1-237ENST00000553175 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
LETMD1-237ENST00000553175 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
LETMD1-237ENST00000553175 MOXD2PA6NHM9 499 aa10.31□□□□□ -0.76
LETMD1-237ENST00000553175 LINC01559Q495D7 138 aa10.31□□□□□ -0.76
LETMD1-237ENST00000553175 ZNF511Q8NB15 262 aa10.3□□□□□ -0.76
LETMD1-237ENST00000553175 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
LETMD1-237ENST00000553175 KLF16Q9BXK1 252 aaPredicted RBP10.3□□□□□ -0.76
LETMD1-237ENST00000553175 TULP1O00294 542 aaPredicted RBP10.29□□□□□ -0.76
LETMD1-237ENST00000553175 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
LETMD1-237ENST00000553175 DESI1Q6ICB0 168 aa10.29□□□□□ -0.76
LETMD1-237ENST00000553175 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
LETMD1-237ENST00000553175 NNTQ13423 1086 aa10.28□□□□□ -0.76
LETMD1-237ENST00000553175 FAM181BA6NEQ2 426 aa10.27□□□□□ -0.77
LETMD1-237ENST00000553175 TIMP2P16035 220 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms