RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
LETMD1-234ENST00000552645 NCOA3Q9Y6Q9 1424 aa14.13□□□□□ -0.15
LETMD1-234ENST00000552645 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
LETMD1-234ENST00000552645 CENPBP07199 599 aaPredicted RBP14.12□□□□□ -0.15
LETMD1-234ENST00000552645 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
LETMD1-234ENST00000552645 FAM135BQ49AJ0 1406 aa14.11□□□□□ -0.15
LETMD1-234ENST00000552645 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
LETMD1-234ENST00000552645 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
LETMD1-234ENST00000552645 DLC1Q96QB1 1528 aa14.1□□□□□ -0.15
LETMD1-234ENST00000552645 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
LETMD1-234ENST00000552645 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
LETMD1-234ENST00000552645 CARD11Q9BXL7 1154 aa14.1□□□□□ -0.15
LETMD1-234ENST00000552645 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
LETMD1-234ENST00000552645 NUTM2FA1L443 756 aa14.09□□□□□ -0.15
LETMD1-234ENST00000552645 RALGAPBQ86X10 1494 aa14.09□□□□□ -0.15
LETMD1-234ENST00000552645 SIRT1Q96EB6 747 aa14.08□□□□□ -0.15
LETMD1-234ENST00000552645 ROBO1Q9Y6N7 1651 aa14.07□□□□□ -0.16
LETMD1-234ENST00000552645 DCCP43146 1447 aa14.07□□□□□ -0.16
LETMD1-234ENST00000552645 QRICH2Q9H0J4 1663 aa14.07□□□□□ -0.16
LETMD1-234ENST00000552645 CDC42BPGQ6DT37 1551 aa14.06□□□□□ -0.16
LETMD1-234ENST00000552645 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
LETMD1-234ENST00000552645 RGPD8O14715 1765 aaPredicted RBP14.05□□□□□ -0.16
LETMD1-234ENST00000552645 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
LETMD1-234ENST00000552645 MST1RQ04912 1400 aa14.04□□□□□ -0.16
LETMD1-234ENST00000552645 FMN2Q9NZ56 1722 aa14.04□□□□□ -0.16
LETMD1-234ENST00000552645 GTF3C3Q9Y5Q9 886 aa14.04□□□□□ -0.16
LETMD1-234ENST00000552645 GPRASP1Q5JY77 1395 aa14.03□□□□□ -0.16
LETMD1-234ENST00000552645 C1orf167Q5SNV9 1468 aa14.02□□□□□ -0.17
LETMD1-234ENST00000552645 HSPA1LP34931 641 aa14.01□□□□□ -0.17
LETMD1-234ENST00000552645 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
LETMD1-234ENST00000552645 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
LETMD1-234ENST00000552645 ADGRB2O60241 1585 aa14.01□□□□□ -0.17
LETMD1-234ENST00000552645 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
LETMD1-234ENST00000552645 PHLPP1O60346 1717 aa14□□□□□ -0.17
LETMD1-234ENST00000552645 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
LETMD1-234ENST00000552645 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
LETMD1-234ENST00000552645 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
LETMD1-234ENST00000552645 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
LETMD1-234ENST00000552645 USP47Q96K76 1375 aa13.98□□□□□ -0.17
LETMD1-234ENST00000552645 ST20-MTHFSA0A0A6YYL1 179 aa13.97□□□□□ -0.17
LETMD1-234ENST00000552645 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
LETMD1-234ENST00000552645 TULP4Q9NRJ4 1543 aa13.97□□□□□ -0.17
LETMD1-234ENST00000552645 EVC2Q86UK5 1308 aa13.96□□□□□ -0.17
LETMD1-234ENST00000552645 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
LETMD1-234ENST00000552645 FOXO3O43524 673 aa13.95□□□□□ -0.18
LETMD1-234ENST00000552645 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
LETMD1-234ENST00000552645 PMFBP1Q8TBY8 1022 aa13.95□□□□□ -0.18
LETMD1-234ENST00000552645 NUDT16Q96DE0 195 aaKnown RBP13.95□□□□□ -0.18
LETMD1-234ENST00000552645 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
LETMD1-234ENST00000552645 PRR36Q9H6K5 1346 aa13.95□□□□□ -0.18
LETMD1-234ENST00000552645 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
LETMD1-234ENST00000552645 ANKARQ7Z5J8 1434 aa13.94□□□□□ -0.18
LETMD1-234ENST00000552645 KIF1AQ12756 1690 aa13.94□□□□□ -0.18
LETMD1-234ENST00000552645 NHSL1Q5SYE7 1610 aa13.94□□□□□ -0.18
LETMD1-234ENST00000552645 AHDC1Q5TGY3 1603 aaPredicted RBP13.93□□□□□ -0.18
LETMD1-234ENST00000552645 ATP7BP35670 1465 aa13.92□□□□□ -0.18
LETMD1-234ENST00000552645 COL16A1Q07092 1604 aaPredicted RBP13.91□□□□□ -0.18
LETMD1-234ENST00000552645 EIF4G2P78344 907 aaKnown RBP eCLIP13.91□□□□□ -0.18
LETMD1-234ENST00000552645 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
LETMD1-234ENST00000552645 NPHP3Q7Z494 1330 aa13.91□□□□□ -0.18
LETMD1-234ENST00000552645 PSME1Q06323 249 aa13.9□□□□□ -0.18
LETMD1-234ENST00000552645 TOPAZ1Q8N9V7 1692 aa13.9□□□□□ -0.18
LETMD1-234ENST00000552645 SBNO2Q9Y2G9 1366 aa13.9□□□□□ -0.18
LETMD1-234ENST00000552645 TESK2Q96S53 571 aa13.9□□□□□ -0.19
LETMD1-234ENST00000552645 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.19
LETMD1-234ENST00000552645 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
LETMD1-234ENST00000552645 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
LETMD1-234ENST00000552645 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
LETMD1-234ENST00000552645 TMF1P82094 1093 aa13.88□□□□□ -0.19
LETMD1-234ENST00000552645 KRT28Q7Z3Y7 464 aa13.88□□□□□ -0.19
LETMD1-234ENST00000552645 TMC1Q8TDI8 760 aa13.88□□□□□ -0.19
LETMD1-234ENST00000552645 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
LETMD1-234ENST00000552645 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
LETMD1-234ENST00000552645 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
LETMD1-234ENST00000552645 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
LETMD1-234ENST00000552645 DISP3Q9P2K9 1392 aa13.87□□□□□ -0.19
LETMD1-234ENST00000552645 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
LETMD1-234ENST00000552645 PXDNQ92626 1479 aa13.86□□□□□ -0.19
LETMD1-234ENST00000552645 ACEP12821 1306 aa13.86□□□□□ -0.19
LETMD1-234ENST00000552645 SOS2Q07890 1332 aaPredicted RBP13.86□□□□□ -0.19
LETMD1-234ENST00000552645 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
LETMD1-234ENST00000552645 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
LETMD1-234ENST00000552645 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
LETMD1-234ENST00000552645 JCADQ9P266 1359 aa13.85□□□□□ -0.19
LETMD1-234ENST00000552645 NUTM2BA6NNL0 878 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-234ENST00000552645 NUTM2EB1AL46 878 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-234ENST00000552645 NUTM2AQ8IVF1 878 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-234ENST00000552645 SHPRHQ149N8 1683 aa13.84□□□□□ -0.19
LETMD1-234ENST00000552645 PLEKHG3A1L390 1219 aa13.83□□□□□ -0.2
LETMD1-234ENST00000552645 CDCA8Q53HL2 280 aa13.82□□□□□ -0.2
LETMD1-234ENST00000552645 SLC12A5Q9H2X9 1139 aa13.82□□□□□ -0.2
LETMD1-234ENST00000552645 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
LETMD1-234ENST00000552645 PNPLA6Q8IY17 1366 aa13.82□□□□□ -0.2
LETMD1-234ENST00000552645 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-234ENST00000552645 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
LETMD1-234ENST00000552645 SPATA31A3Q5VYP0 1347 aa13.81□□□□□ -0.2
LETMD1-234ENST00000552645 TNS3Q68CZ2 1445 aa13.8□□□□□ -0.2
LETMD1-234ENST00000552645 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
LETMD1-234ENST00000552645 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
LETMD1-234ENST00000552645 NUTM2GQ5VZR2 741 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms