RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
CCDC59-206ENST00000552412 CYB5RLQ6IPT4 315 aa9.21□□□□□ -0.94
CCDC59-206ENST00000552412 GGT6Q6P531 493 aa9.21□□□□□ -0.94
CCDC59-206ENST00000552412 PROM2Q8N271 834 aa9.21□□□□□ -0.94
CCDC59-206ENST00000552412 YEATS2Q9ULM3 1422 aa9.21□□□□□ -0.94
CCDC59-206ENST00000552412 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.94
CCDC59-206ENST00000552412 PUS7Q96PZ0 661 aaKnown RBP9.2□□□□□ -0.94
CCDC59-206ENST00000552412 CFAP65Q6ZU64 1925 aaKnown RBP9.2□□□□□ -0.94
CCDC59-206ENST00000552412 ADGRF5Q8IZF2 1346 aa9.2□□□□□ -0.94
CCDC59-206ENST00000552412 ARHGEF40Q8TER5 1519 aa9.2□□□□□ -0.94
CCDC59-206ENST00000552412 C14orf93Q9H972 538 aaKnown RBP9.19□□□□□ -0.94
CCDC59-206ENST00000552412 PANK3Q9H999 370 aa9.19□□□□□ -0.94
CCDC59-206ENST00000552412 ERVK-7P63135 1459 aa9.19□□□□□ -0.94
CCDC59-206ENST00000552412 TMEM131LA2VDJ0 1609 aa9.18□□□□□ -0.94
CCDC59-206ENST00000552412 VGFO15240 615 aaPredicted RBP9.18□□□□□ -0.94
CCDC59-206ENST00000552412 BLMP54132 1417 aaPredicted RBP9.18□□□□□ -0.94
CCDC59-206ENST00000552412 FAM69CQ0P6D2 419 aa9.18□□□□□ -0.94
CCDC59-206ENST00000552412 USP32Q8NFA0 1604 aa9.18□□□□□ -0.94
CCDC59-206ENST00000552412 QRICH2Q9H0J4 1663 aa9.18□□□□□ -0.94
CCDC59-206ENST00000552412 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
CCDC59-206ENST00000552412 KIF13AQ9H1H9 1805 aa9.17□□□□□ -0.94
CCDC59-206ENST00000552412 CENPJQ9HC77 1338 aaPredicted RBP9.17□□□□□ -0.94
CCDC59-206ENST00000552412 PDE3BQ13370 1112 aa9.17□□□□□ -0.94
CCDC59-206ENST00000552412 CFAP70Q5T0N1 1121 aa9.17□□□□□ -0.94
CCDC59-206ENST00000552412 NUDCQ9Y266 331 aa9.17□□□□□ -0.94
CCDC59-206ENST00000552412 ARHGEF28Q8N1W1 1705 aaKnown RBP9.17□□□□□ -0.94
CCDC59-206ENST00000552412 SPATA31D1Q6ZQQ2 1576 aa9.16□□□□□ -0.94
CCDC59-206ENST00000552412 AMER1Q5JTC6 1135 aaPredicted RBP9.16□□□□□ -0.94
CCDC59-206ENST00000552412 TSPOAP1O95153 1857 aa9.16□□□□□ -0.94
CCDC59-206ENST00000552412 NINLQ9Y2I6 1382 aa9.15□□□□□ -0.94
CCDC59-206ENST00000552412 RNF123Q5XPI4 1314 aa9.15□□□□□ -0.94
CCDC59-206ENST00000552412 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
CCDC59-206ENST00000552412 MYO5BQ9ULV0 1848 aa9.14□□□□□ -0.95
CCDC59-206ENST00000552412 CHGAP10645 457 aaKnown RBP9.13□□□□□ -0.95
CCDC59-206ENST00000552412 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
CCDC59-206ENST00000552412 GABBR2O75899 941 aa9.12□□□□□ -0.95
CCDC59-206ENST00000552412 IDI1Q13907 227 aa9.12□□□□□ -0.95
CCDC59-206ENST00000552412 CLTCQ00610 1675 aaKnown RBP9.12□□□□□ -0.95
CCDC59-206ENST00000552412 NSD2O96028 1365 aa9.12□□□□□ -0.95
CCDC59-206ENST00000552412 PAK3O75914 559 aaPredicted RBP9.11□□□□□ -0.95
CCDC59-206ENST00000552412 CC2D1BQ5T0F9 858 aaKnown RBP9.11□□□□□ -0.95
CCDC59-206ENST00000552412 NGEFQ8N5V2 710 aa9.11□□□□□ -0.95
CCDC59-206ENST00000552412 PPP4R2Q9NY27 417 aa9.11□□□□□ -0.95
CCDC59-206ENST00000552412 DLC1Q96QB1 1528 aa9.1□□□□□ -0.95
CCDC59-206ENST00000552412 EVC2Q86UK5 1308 aa9.1□□□□□ -0.95
CCDC59-206ENST00000552412 PPP2R1AP30153 589 aa9.1□□□□□ -0.95
CCDC59-206ENST00000552412 PLCD3Q8N3E9 789 aa9.1□□□□□ -0.95
CCDC59-206ENST00000552412 TULP4Q9NRJ4 1543 aa9.09□□□□□ -0.95
CCDC59-206ENST00000552412 POLR3AO14802 1390 aaPredicted RBP9.08□□□□□ -0.96
CCDC59-206ENST00000552412 ATAD2Q6PL18 1390 aa9.08□□□□□ -0.96
CCDC59-206ENST00000552412 ANKRD36BQ8N2N9 1353 aa9.08□□□□□ -0.96
CCDC59-206ENST00000552412 ALKQ9UM73 1620 aa9.08□□□□□ -0.96
CCDC59-206ENST00000552412 A2ML1A8K2U0 1454 aa9.08□□□□□ -0.96
CCDC59-206ENST00000552412 PTPRMP28827 1452 aa9.08□□□□□ -0.96
CCDC59-206ENST00000552412 YTHDC2Q9H6S0 1430 aaKnown RBP9.07□□□□□ -0.96
CCDC59-206ENST00000552412 CNGB1Q14028 1251 aaPredicted RBP9.07□□□□□ -0.96
CCDC59-206ENST00000552412 WDR43Q15061 677 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCDC59-206ENST00000552412 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
CCDC59-206ENST00000552412 SETD1AO15047 1707 aaKnown RBP9.07□□□□□ -0.96
CCDC59-206ENST00000552412 NSD3Q9BZ95 1437 aa9.06□□□□□ -0.96
CCDC59-206ENST00000552412 KNDC1Q76NI1 1749 aa9.06□□□□□ -0.96
CCDC59-206ENST00000552412 MNX1P50219 401 aaPredicted RBP9.06□□□□□ -0.96
CCDC59-206ENST00000552412 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC59-206ENST00000552412 BCANQ96GW7 911 aa9.06□□□□□ -0.96
CCDC59-206ENST00000552412 MED14O60244 1454 aa9.06□□□□□ -0.96
CCDC59-206ENST00000552412 CGNL1Q0VF96 1302 aa9.05□□□□□ -0.96
CCDC59-206ENST00000552412 ANKRD26Q9UPS8 1709 aa9.05□□□□□ -0.96
CCDC59-206ENST00000552412 RIMS2Q9UQ26 1411 aa9.05□□□□□ -0.96
CCDC59-206ENST00000552412 TMEM132EQ6IEE7 984 aa9.04□□□□□ -0.96
CCDC59-206ENST00000552412 CARD14Q9BXL6 1004 aa9.04□□□□□ -0.96
CCDC59-206ENST00000552412 TSHZ2Q9NRE2 1034 aa9.04□□□□□ -0.96
CCDC59-206ENST00000552412 ABCC11Q96J66 1382 aa9.03□□□□□ -0.96
CCDC59-206ENST00000552412 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
CCDC59-206ENST00000552412 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
CCDC59-206ENST00000552412 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
CCDC59-206ENST00000552412 ZNF521Q96K83 1311 aa9.03□□□□□ -0.96
CCDC59-206ENST00000552412 NLRP1Q9C000 1473 aa9.02□□□□□ -0.96
CCDC59-206ENST00000552412 NRXN3Q9Y4C0 1643 aa9.02□□□□□ -0.96
CCDC59-206ENST00000552412 ZMYM3Q14202 1370 aa9.02□□□□□ -0.97
CCDC59-206ENST00000552412 FBXO31Q5XUX0 539 aaPredicted RBP9.02□□□□□ -0.97
CCDC59-206ENST00000552412 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.97
CCDC59-206ENST00000552412 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
CCDC59-206ENST00000552412 TSPYL2Q9H2G4 693 aaPredicted RBP9.02□□□□□ -0.97
CCDC59-206ENST00000552412 ESF1Q9H501 851 aaKnown RBP9.02□□□□□ -0.97
CCDC59-206ENST00000552412 RCAN3Q9UKA8 241 aa9.02□□□□□ -0.97
CCDC59-206ENST00000552412 TECPR2O15040 1411 aa9.02□□□□□ -0.97
CCDC59-206ENST00000552412 ATP7BP35670 1465 aa9.02□□□□□ -0.97
CCDC59-206ENST00000552412 TNRQ92752 1358 aa9.01□□□□□ -0.97
CCDC59-206ENST00000552412 SHPRHQ149N8 1683 aa9.01□□□□□ -0.97
CCDC59-206ENST00000552412 RRP1P56182 461 aaKnown RBP9.01□□□□□ -0.97
CCDC59-206ENST00000552412 FAM135BQ49AJ0 1406 aa9.01□□□□□ -0.97
CCDC59-206ENST00000552412 UBR1Q8IWV7 1749 aa9.01□□□□□ -0.97
CCDC59-206ENST00000552412 FBXO3Q9UK99 471 aa9.01□□□□□ -0.97
CCDC59-206ENST00000552412 CPS1P31327 1500 aa9□□□□□ -0.97
CCDC59-206ENST00000552412 CLCN6P51797 869 aa9□□□□□ -0.97
CCDC59-206ENST00000552412 MORC1Q86VD1 984 aa9□□□□□ -0.97
CCDC59-206ENST00000552412 SLC12A5Q9H2X9 1139 aa9□□□□□ -0.97
CCDC59-206ENST00000552412 TERF2IPQ9NYB0 399 aa9□□□□□ -0.97
CCDC59-206ENST00000552412 KIF20BQ96Q89 1820 aa8.99□□□□□ -0.97
CCDC59-206ENST00000552412 CFAP53Q96M91 514 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms