RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
CHPT1-207ENST00000552213 DLC1Q96QB1 1528 aa18.68■□□□□ 0.58
CHPT1-207ENST00000552213 KNDC1Q76NI1 1749 aa18.67■□□□□ 0.58
CHPT1-207ENST00000552213 ILDR1Q86SU0 546 aaPredicted RBP18.67■□□□□ 0.58
CHPT1-207ENST00000552213 CARD11Q9BXL7 1154 aa18.67■□□□□ 0.58
CHPT1-207ENST00000552213 DCCP43146 1447 aa18.66■□□□□ 0.58
CHPT1-207ENST00000552213 TRPM1Q7Z4N2 1603 aa18.65■□□□□ 0.58
CHPT1-207ENST00000552213 MINK1Q8N4C8 1332 aaPredicted RBP18.64■□□□□ 0.57
CHPT1-207ENST00000552213 RALGAPBQ86X10 1494 aa18.64■□□□□ 0.57
CHPT1-207ENST00000552213 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
CHPT1-207ENST00000552213 HIRIP3Q9BW71 556 aaPredicted RBP18.63■□□□□ 0.57
CHPT1-207ENST00000552213 CENPJQ9HC77 1338 aaPredicted RBP18.62■□□□□ 0.57
CHPT1-207ENST00000552213 GPRASP1Q5JY77 1395 aa18.62■□□□□ 0.57
CHPT1-207ENST00000552213 NALCNQ8IZF0 1738 aa18.61■□□□□ 0.57
CHPT1-207ENST00000552213 EIF3AQ14152 1382 aaKnown RBP18.61■□□□□ 0.57
CHPT1-207ENST00000552213 NUTM2FA1L443 756 aa18.6■□□□□ 0.57
CHPT1-207ENST00000552213 MST1RQ04912 1400 aa18.58■□□□□ 0.57
CHPT1-207ENST00000552213 CDC42BPGQ6DT37 1551 aa18.57■□□□□ 0.56
CHPT1-207ENST00000552213 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
CHPT1-207ENST00000552213 WASLO00401 505 aaPredicted RBP18.56■□□□□ 0.56
CHPT1-207ENST00000552213 BRINP3Q76B58 766 aa18.56■□□□□ 0.56
CHPT1-207ENST00000552213 C1orf167Q5SNV9 1468 aa18.56■□□□□ 0.56
CHPT1-207ENST00000552213 HSPA1LP34931 641 aa18.55■□□□□ 0.56
CHPT1-207ENST00000552213 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
CHPT1-207ENST00000552213 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
CHPT1-207ENST00000552213 CDK19Q9BWU1 502 aa18.53■□□□□ 0.56
CHPT1-207ENST00000552213 ROBO1Q9Y6N7 1651 aa18.51■□□□□ 0.55
CHPT1-207ENST00000552213 SRPK2P78362 688 aaKnown RBP18.51■□□□□ 0.55
CHPT1-207ENST00000552213 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
CHPT1-207ENST00000552213 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
CHPT1-207ENST00000552213 USP47Q96K76 1375 aa18.5■□□□□ 0.55
CHPT1-207ENST00000552213 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
CHPT1-207ENST00000552213 ANKARQ7Z5J8 1434 aa18.49■□□□□ 0.55
CHPT1-207ENST00000552213 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
CHPT1-207ENST00000552213 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
CHPT1-207ENST00000552213 FMN2Q9NZ56 1722 aa18.47■□□□□ 0.55
CHPT1-207ENST00000552213 DDX17Q92841 729 aaKnown RBP18.47■□□□□ 0.55
CHPT1-207ENST00000552213 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
CHPT1-207ENST00000552213 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
CHPT1-207ENST00000552213 PRR36Q9H6K5 1346 aa18.47■□□□□ 0.55
CHPT1-207ENST00000552213 TULP4Q9NRJ4 1543 aa18.46■□□□□ 0.55
CHPT1-207ENST00000552213 FOXO3O43524 673 aa18.46■□□□□ 0.55
CHPT1-207ENST00000552213 SLC24A1O60721 1099 aa18.45■□□□□ 0.54
CHPT1-207ENST00000552213 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
CHPT1-207ENST00000552213 NPHP3Q7Z494 1330 aa18.45■□□□□ 0.54
CHPT1-207ENST00000552213 SBNO2Q9Y2G9 1366 aa18.44■□□□□ 0.54
CHPT1-207ENST00000552213 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHPT1-207ENST00000552213 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
CHPT1-207ENST00000552213 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
CHPT1-207ENST00000552213 NGDNQ8NEJ9 315 aaKnown RBP18.42■□□□□ 0.54
CHPT1-207ENST00000552213 TESK2Q96S53 571 aa18.42■□□□□ 0.54
CHPT1-207ENST00000552213 ATP7BP35670 1465 aa18.41■□□□□ 0.54
CHPT1-207ENST00000552213 PSME1Q06323 249 aa18.41■□□□□ 0.54
CHPT1-207ENST00000552213 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
CHPT1-207ENST00000552213 TMF1P82094 1093 aa18.4■□□□□ 0.54
CHPT1-207ENST00000552213 LRRC59Q96AG4 307 aaKnown RBP18.4■□□□□ 0.54
CHPT1-207ENST00000552213 PHLPP1O60346 1717 aa18.4■□□□□ 0.54
CHPT1-207ENST00000552213 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
CHPT1-207ENST00000552213 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
CHPT1-207ENST00000552213 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.53
CHPT1-207ENST00000552213 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
CHPT1-207ENST00000552213 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
CHPT1-207ENST00000552213 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
CHPT1-207ENST00000552213 JCADQ9P266 1359 aa18.37■□□□□ 0.53
CHPT1-207ENST00000552213 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
CHPT1-207ENST00000552213 KIF1AQ12756 1690 aa18.37■□□□□ 0.53
CHPT1-207ENST00000552213 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
CHPT1-207ENST00000552213 NHSL1Q5SYE7 1610 aa18.36■□□□□ 0.53
CHPT1-207ENST00000552213 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
CHPT1-207ENST00000552213 COL16A1Q07092 1604 aaPredicted RBP18.35■□□□□ 0.53
CHPT1-207ENST00000552213 ACEP12821 1306 aa18.35■□□□□ 0.53
CHPT1-207ENST00000552213 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
CHPT1-207ENST00000552213 RGPD8O14715 1765 aaPredicted RBP18.35■□□□□ 0.53
CHPT1-207ENST00000552213 PUS7Q96PZ0 661 aaKnown RBP18.34■□□□□ 0.53
CHPT1-207ENST00000552213 PXDNQ92626 1479 aa18.33■□□□□ 0.53
CHPT1-207ENST00000552213 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.53
CHPT1-207ENST00000552213 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
CHPT1-207ENST00000552213 LMOD2Q6P5Q4 547 aa18.33■□□□□ 0.52
CHPT1-207ENST00000552213 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
CHPT1-207ENST00000552213 ITSN1Q15811 1721 aa18.32■□□□□ 0.52
CHPT1-207ENST00000552213 POLR3AO14802 1390 aaPredicted RBP18.31■□□□□ 0.52
CHPT1-207ENST00000552213 POLR3GLQ9BT43 218 aa18.31■□□□□ 0.52
CHPT1-207ENST00000552213 SPATA31A3Q5VYP0 1347 aa18.3■□□□□ 0.52
CHPT1-207ENST00000552213 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
CHPT1-207ENST00000552213 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
CHPT1-207ENST00000552213 SPATA31A6Q5VVP1 1343 aa18.29■□□□□ 0.52
CHPT1-207ENST00000552213 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
CHPT1-207ENST00000552213 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
CHPT1-207ENST00000552213 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
CHPT1-207ENST00000552213 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
CHPT1-207ENST00000552213 TOPAZ1Q8N9V7 1692 aa18.28■□□□□ 0.52
CHPT1-207ENST00000552213 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
CHPT1-207ENST00000552213 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
CHPT1-207ENST00000552213 ZNF692Q9BU19 519 aaPredicted RBP18.28■□□□□ 0.52
CHPT1-207ENST00000552213 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
CHPT1-207ENST00000552213 TERF2IPQ9NYB0 399 aa18.27■□□□□ 0.52
CHPT1-207ENST00000552213 ARHGEF10O15013 1369 aa18.26■□□□□ 0.51
CHPT1-207ENST00000552213 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
CHPT1-207ENST00000552213 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
CHPT1-207ENST00000552213 MEX3CQ5U5Q3 659 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms