RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 SLC6A16Q9GZN6 736 aa12.56□□□□□ -0.4
GNPTAB-209ENST00000552009 KRI1Q8N9T8 703 aaKnown RBP12.55□□□□□ -0.4
GNPTAB-209ENST00000552009 SPSB2Q99619 263 aa12.55□□□□□ -0.4
GNPTAB-209ENST00000552009 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
GNPTAB-209ENST00000552009 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
GNPTAB-209ENST00000552009 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
GNPTAB-209ENST00000552009 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
GNPTAB-209ENST00000552009 MORN1Q5T089 497 aa12.54□□□□□ -0.4
GNPTAB-209ENST00000552009 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
GNPTAB-209ENST00000552009 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
GNPTAB-209ENST00000552009 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
GNPTAB-209ENST00000552009 SLC19A1P41440 591 aa12.53□□□□□ -0.4
GNPTAB-209ENST00000552009 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.41
GNPTAB-209ENST00000552009 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
GNPTAB-209ENST00000552009 ABCC8Q09428 1581 aa12.52□□□□□ -0.41
GNPTAB-209ENST00000552009 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
GNPTAB-209ENST00000552009 NRG2O14511 850 aaPredicted RBP12.5□□□□□ -0.41
GNPTAB-209ENST00000552009 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
GNPTAB-209ENST00000552009 CHD1O14646 1710 aa12.49□□□□□ -0.41
GNPTAB-209ENST00000552009 TDRD9Q8NDG6 1382 aaKnown RBP12.49□□□□□ -0.41
GNPTAB-209ENST00000552009 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
GNPTAB-209ENST00000552009 CLCN1P35523 988 aa12.49□□□□□ -0.41
GNPTAB-209ENST00000552009 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
GNPTAB-209ENST00000552009 SLC27A5Q9Y2P5 690 aa12.48□□□□□ -0.41
GNPTAB-209ENST00000552009 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
GNPTAB-209ENST00000552009 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
GNPTAB-209ENST00000552009 CD46P15529 392 aa12.47□□□□□ -0.41
GNPTAB-209ENST00000552009 Q3C1V9 767 aa12.47□□□□□ -0.41
GNPTAB-209ENST00000552009 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
GNPTAB-209ENST00000552009 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
GNPTAB-209ENST00000552009 CUX1P39880 1505 aa12.47□□□□□ -0.41
GNPTAB-209ENST00000552009 SOGA1O94964 1423 aa12.45□□□□□ -0.42
GNPTAB-209ENST00000552009 KDM4AO75164 1064 aa12.45□□□□□ -0.42
GNPTAB-209ENST00000552009 USP46P62068 366 aa12.45□□□□□ -0.42
GNPTAB-209ENST00000552009 SPRYD7Q5W111 196 aa12.43□□□□□ -0.42
GNPTAB-209ENST00000552009 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
GNPTAB-209ENST00000552009 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
GNPTAB-209ENST00000552009 THAP11Q96EK4 314 aa12.43□□□□□ -0.42
GNPTAB-209ENST00000552009 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
GNPTAB-209ENST00000552009 BRICD5Q6PL45 260 aa12.42□□□□□ -0.42
GNPTAB-209ENST00000552009 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
GNPTAB-209ENST00000552009 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
GNPTAB-209ENST00000552009 LIAT1Q6ZQX7 453 aa12.4□□□□□ -0.42
GNPTAB-209ENST00000552009 ZNF697Q5TEC3 545 aa12.39□□□□□ -0.43
GNPTAB-209ENST00000552009 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
GNPTAB-209ENST00000552009 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
GNPTAB-209ENST00000552009 ZMYND10O75800 440 aa12.38□□□□□ -0.43
GNPTAB-209ENST00000552009 MSS51Q4VC12 460 aa12.38□□□□□ -0.43
GNPTAB-209ENST00000552009 FAM160A2Q8N612 972 aaPredicted RBP12.38□□□□□ -0.43
GNPTAB-209ENST00000552009 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
GNPTAB-209ENST00000552009 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
GNPTAB-209ENST00000552009 EMID1Q96A84 441 aaPredicted RBP12.37□□□□□ -0.43
GNPTAB-209ENST00000552009 FCF1Q9Y324 198 aaKnown RBP12.37□□□□□ -0.43
GNPTAB-209ENST00000552009 RPIAP49247 311 aa12.36□□□□□ -0.43
GNPTAB-209ENST00000552009 TTLL12Q14166 644 aaPredicted RBP12.36□□□□□ -0.43
GNPTAB-209ENST00000552009 CD2BP2O95400 341 aaKnown RBP12.35□□□□□ -0.43
GNPTAB-209ENST00000552009 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
GNPTAB-209ENST00000552009 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
GNPTAB-209ENST00000552009 ZBTB24O43167 697 aaPredicted RBP12.34□□□□□ -0.43
GNPTAB-209ENST00000552009 PLA2G2CQ5R387 149 aa12.34□□□□□ -0.43
GNPTAB-209ENST00000552009 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
GNPTAB-209ENST00000552009 GRIN2BQ13224 1484 aa12.34□□□□□ -0.43
GNPTAB-209ENST00000552009 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 HOXA2O43364 376 aa12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 PRR20EP86478 221 aa12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 PRR20CP86479 221 aa12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 PRR20DP86480 221 aa12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 PRR20BP86481 221 aa12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 PRR20AP86496 221 aa12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
GNPTAB-209ENST00000552009 PRDM9Q9NQV7 894 aa12.32□□□□□ -0.44
GNPTAB-209ENST00000552009 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
GNPTAB-209ENST00000552009 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
GNPTAB-209ENST00000552009 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
GNPTAB-209ENST00000552009 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
GNPTAB-209ENST00000552009 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
GNPTAB-209ENST00000552009 SYNJ2O15056 1496 aa12.3□□□□□ -0.44
GNPTAB-209ENST00000552009 AMHR2Q16671 573 aa12.3□□□□□ -0.44
GNPTAB-209ENST00000552009 TRIM67Q6ZTA4 783 aa12.3□□□□□ -0.44
GNPTAB-209ENST00000552009 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
GNPTAB-209ENST00000552009 TNFRSF10AO00220 468 aa12.28□□□□□ -0.44
GNPTAB-209ENST00000552009 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
GNPTAB-209ENST00000552009 DGAT1O75907 488 aa12.27□□□□□ -0.45
GNPTAB-209ENST00000552009 MMP16P51512 607 aa12.27□□□□□ -0.45
GNPTAB-209ENST00000552009 FOXC1Q12948 553 aa12.27□□□□□ -0.45
GNPTAB-209ENST00000552009 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.45
GNPTAB-209ENST00000552009 GDF9O60383 454 aa12.26□□□□□ -0.45
GNPTAB-209ENST00000552009 HLA-CQ95604 372 aa12.26□□□□□ -0.45
GNPTAB-209ENST00000552009 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
GNPTAB-209ENST00000552009 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
GNPTAB-209ENST00000552009 AK7Q96M32 723 aa12.25□□□□□ -0.45
GNPTAB-209ENST00000552009 FAM187AA6NFU0 413 aa12.24□□□□□ -0.45
GNPTAB-209ENST00000552009 DXOO77932 396 aaKnown RBP12.24□□□□□ -0.45
GNPTAB-209ENST00000552009 FDX1P10109 184 aa12.23□□□□□ -0.45
GNPTAB-209ENST00000552009 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
GNPTAB-209ENST00000552009 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
GNPTAB-209ENST00000552009 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
GNPTAB-209ENST00000552009 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
GNPTAB-209ENST00000552009 DIXDC1Q155Q3 683 aa12.22□□□□□ -0.45
GNPTAB-209ENST00000552009 RETREG3Q86VR2 466 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms