RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TRPC5Q9UL62 973 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-210ENST00000551981 CDC42BPGQ6DT37 1551 aa21.38■■□□□ 1.01
CHMP1A-210ENST00000551981 NPHP3Q7Z494 1330 aa21.35■■□□□ 1.01
CHMP1A-210ENST00000551981 FNBP4Q8N3X1 1017 aaPredicted RBP21.35■■□□□ 1.01
CHMP1A-210ENST00000551981 ESCO1Q5FWF5 840 aa21.34■■□□□ 1.01
CHMP1A-210ENST00000551981 MARF1Q9Y4F3 1742 aaKnown RBP21.32■■□□□ 1
CHMP1A-210ENST00000551981 ATRNO75882 1429 aa21.32■■□□□ 1
CHMP1A-210ENST00000551981 FOXD1Q16676 465 aa21.32■■□□□ 1
CHMP1A-210ENST00000551981 MYOM2P54296 1465 aa21.32■■□□□ 1
CHMP1A-210ENST00000551981 LRPPRCP42704 1394 aaKnown RBP21.31■■□□□ 1
CHMP1A-210ENST00000551981 PXDNQ92626 1479 aa21.31■■□□□ 1
CHMP1A-210ENST00000551981 SRCAPQ6ZRS2 3230 aa21.3■■□□□ 1
CHMP1A-210ENST00000551981 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
CHMP1A-210ENST00000551981 EP400Q96L91 3159 aa21.28■■□□□ 1
CHMP1A-210ENST00000551981 TECPR2O15040 1411 aa21.28■■□□□ 1
CHMP1A-210ENST00000551981 FOXO3O43524 673 aa21.27■■□□□ 1
CHMP1A-210ENST00000551981 ANKRD30BQ9BXX2 1392 aa21.26■□□□□ 0.99
CHMP1A-210ENST00000551981 STK26Q9P289 416 aa21.26■□□□□ 0.99
CHMP1A-210ENST00000551981 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
CHMP1A-210ENST00000551981 IFT172Q9UG01 1749 aa21.26■□□□□ 0.99
CHMP1A-210ENST00000551981 ADGRF5Q8IZF2 1346 aa21.26■□□□□ 0.99
CHMP1A-210ENST00000551981 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
CHMP1A-210ENST00000551981 XPCQ01831 940 aaPredicted RBP21.25■□□□□ 0.99
CHMP1A-210ENST00000551981 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
CHMP1A-210ENST00000551981 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
CHMP1A-210ENST00000551981 RGL3Q3MIN7 710 aa21.23■□□□□ 0.99
CHMP1A-210ENST00000551981 WAPLQ7Z5K2 1190 aa21.23■□□□□ 0.99
CHMP1A-210ENST00000551981 CCDC125Q86Z20 511 aa21.23■□□□□ 0.99
CHMP1A-210ENST00000551981 ZRANB1Q9UGI0 708 aa21.23■□□□□ 0.99
CHMP1A-210ENST00000551981 FMN2Q9NZ56 1722 aa21.23■□□□□ 0.99
CHMP1A-210ENST00000551981 ABCC11Q96J66 1382 aa21.23■□□□□ 0.99
CHMP1A-210ENST00000551981 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
CHMP1A-210ENST00000551981 NUTM2FA1L443 756 aa21.22■□□□□ 0.99
CHMP1A-210ENST00000551981 GJD4Q96KN9 370 aaPredicted RBP21.21■□□□□ 0.99
CHMP1A-210ENST00000551981 PIK3C2GO75747 1445 aa21.2■□□□□ 0.98
CHMP1A-210ENST00000551981 TMEM132EQ6IEE7 984 aa21.18■□□□□ 0.98
CHMP1A-210ENST00000551981 SPATA31A3Q5VYP0 1347 aa21.18■□□□□ 0.98
CHMP1A-210ENST00000551981 PLEKHH1Q9ULM0 1364 aa21.18■□□□□ 0.98
CHMP1A-210ENST00000551981 YTHDC2Q9H6S0 1430 aaKnown RBP21.18■□□□□ 0.98
CHMP1A-210ENST00000551981 UNC5CLQ8IV45 518 aa21.17■□□□□ 0.98
CHMP1A-210ENST00000551981 USP32Q8NFA0 1604 aa21.16■□□□□ 0.98
CHMP1A-210ENST00000551981 SLIT2O94813 1529 aa21.16■□□□□ 0.98
CHMP1A-210ENST00000551981 MPHOSPH9Q99550 1183 aa21.16■□□□□ 0.98
CHMP1A-210ENST00000551981 RALGAPBQ86X10 1494 aa21.15■□□□□ 0.98
CHMP1A-210ENST00000551981 KRT28Q7Z3Y7 464 aa21.14■□□□□ 0.97
CHMP1A-210ENST00000551981 SIRT1Q96EB6 747 aa21.14■□□□□ 0.97
CHMP1A-210ENST00000551981 GLI3P10071 1580 aa21.14■□□□□ 0.97
CHMP1A-210ENST00000551981 HAP1P54257 671 aaPredicted RBP21.13■□□□□ 0.97
CHMP1A-210ENST00000551981 RGPD8O14715 1765 aaPredicted RBP21.13■□□□□ 0.97
CHMP1A-210ENST00000551981 PSME1Q06323 249 aa21.12■□□□□ 0.97
CHMP1A-210ENST00000551981 TNS3Q68CZ2 1445 aa21.12■□□□□ 0.97
CHMP1A-210ENST00000551981 PHF8Q9UPP1 1060 aa21.11■□□□□ 0.97
CHMP1A-210ENST00000551981 BLMP54132 1417 aaPredicted RBP21.11■□□□□ 0.97
CHMP1A-210ENST00000551981 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
CHMP1A-210ENST00000551981 NWD2Q9ULI1 1742 aa21.09■□□□□ 0.97
CHMP1A-210ENST00000551981 ACIN1Q9UKV3 1341 aaKnown RBP21.09■□□□□ 0.97
CHMP1A-210ENST00000551981 BRWD3Q6RI45 1802 aa21.09■□□□□ 0.97
CHMP1A-210ENST00000551981 C14orf93Q9H972 538 aaKnown RBP21.09■□□□□ 0.97
CHMP1A-210ENST00000551981 PLCH1Q4KWH8 1693 aa21.09■□□□□ 0.97
CHMP1A-210ENST00000551981 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
CHMP1A-210ENST00000551981 ARHGEF10O15013 1369 aa21.07■□□□□ 0.96
CHMP1A-210ENST00000551981 NRXN1Q9ULB1 1477 aa21.07■□□□□ 0.96
CHMP1A-210ENST00000551981 ABCA3Q99758 1704 aa21.07■□□□□ 0.96
CHMP1A-210ENST00000551981 SF3B2Q13435 895 aaKnown RBP21.06■□□□□ 0.96
CHMP1A-210ENST00000551981 VPS72Q15906 364 aa21.06■□□□□ 0.96
CHMP1A-210ENST00000551981 LMOD2Q6P5Q4 547 aa21.05■□□□□ 0.96
CHMP1A-210ENST00000551981 SEPT12Q8IYM1 358 aa21.05■□□□□ 0.96
CHMP1A-210ENST00000551981 CFAP70Q5T0N1 1121 aa21.04■□□□□ 0.96
CHMP1A-210ENST00000551981 CABLES1Q8TDN4 633 aa21.04■□□□□ 0.96
CHMP1A-210ENST00000551981 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
CHMP1A-210ENST00000551981 CCDC9Q9Y3X0 531 aaKnown RBP21.04■□□□□ 0.96
CHMP1A-210ENST00000551981 PLEKHG5O94827 1062 aa21.03■□□□□ 0.96
CHMP1A-210ENST00000551981 ANKARQ7Z5J8 1434 aa21.03■□□□□ 0.96
CHMP1A-210ENST00000551981 SAFB2Q14151 953 aaKnown RBP eCLIP21.02■□□□□ 0.96
CHMP1A-210ENST00000551981 POGKQ9P215 609 aa21.02■□□□□ 0.96
CHMP1A-210ENST00000551981 DLC1Q96QB1 1528 aa21.02■□□□□ 0.96
CHMP1A-210ENST00000551981 ONECUT3O60422 494 aaPredicted RBP21■□□□□ 0.95
CHMP1A-210ENST00000551981 ADGRB2O60241 1585 aa21■□□□□ 0.95
CHMP1A-210ENST00000551981 KRT27Q7Z3Y8 459 aa20.99■□□□□ 0.95
CHMP1A-210ENST00000551981 DEFB132Q7Z7B7 95 aa20.99■□□□□ 0.95
CHMP1A-210ENST00000551981 PMFBP1Q8TBY8 1022 aa20.98■□□□□ 0.95
CHMP1A-210ENST00000551981 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
CHMP1A-210ENST00000551981 A0A0G2JS52 829 aa20.96■□□□□ 0.95
CHMP1A-210ENST00000551981 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
CHMP1A-210ENST00000551981 MYT1Q01538 1121 aa20.96■□□□□ 0.95
CHMP1A-210ENST00000551981 GPRASP1Q5JY77 1395 aa20.96■□□□□ 0.95
CHMP1A-210ENST00000551981 NRAPQ86VF7 1730 aa20.95■□□□□ 0.94
CHMP1A-210ENST00000551981 TRPM3Q9HCF6 1732 aaPredicted RBP20.95■□□□□ 0.94
CHMP1A-210ENST00000551981 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
CHMP1A-210ENST00000551981 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
CHMP1A-210ENST00000551981 ALS2Q96Q42 1657 aa20.93■□□□□ 0.94
CHMP1A-210ENST00000551981 BTG4Q9NY30 223 aa20.92■□□□□ 0.94
CHMP1A-210ENST00000551981 LRP5O75197 1615 aa20.92■□□□□ 0.94
CHMP1A-210ENST00000551981 BAG6P46379 1132 aa20.91■□□□□ 0.94
CHMP1A-210ENST00000551981 FAM98CQ17RN3 349 aaKnown RBP20.91■□□□□ 0.94
CHMP1A-210ENST00000551981 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
CHMP1A-210ENST00000551981 TULP4Q9NRJ4 1543 aa20.91■□□□□ 0.94
CHMP1A-210ENST00000551981 TRAK1Q9UPV9 953 aa20.91■□□□□ 0.94
CHMP1A-210ENST00000551981 MINK1Q8N4C8 1332 aaPredicted RBP20.9■□□□□ 0.94
CHMP1A-210ENST00000551981 RGPD1P0DJD0 1748 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms