RNA–Protein interactions for RNA: ENST00000551085.5

ERBB3-217, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 4,382 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-217ENST00000551085 HNRNPMP52272 730 aaKnown RBP eCLIP14.1□□□□□ -0.15
ERBB3-217ENST00000551085 NOL8Q76FK4 1167 aaKnown RBP14.1□□□□□ -0.15
ERBB3-217ENST00000551085 PRIMPOLQ96LW4 560 aa14.1□□□□□ -0.15
ERBB3-217ENST00000551085 CWC22Q9HCG8 908 aaKnown RBP14.1□□□□□ -0.15
ERBB3-217ENST00000551085 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
ERBB3-217ENST00000551085 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
ERBB3-217ENST00000551085 ZNF500O60304 480 aaPredicted RBP14.08□□□□□ -0.16
ERBB3-217ENST00000551085 EPRSP07814 1512 aaKnown RBP14.08□□□□□ -0.16
ERBB3-217ENST00000551085 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
ERBB3-217ENST00000551085 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
ERBB3-217ENST00000551085 CHD1LQ86WJ1 897 aa14.07□□□□□ -0.16
ERBB3-217ENST00000551085 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
ERBB3-217ENST00000551085 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
ERBB3-217ENST00000551085 DMTNQ08495 405 aa14.06□□□□□ -0.16
ERBB3-217ENST00000551085 RBM27Q9P2N5 1060 aaKnown RBP14.06□□□□□ -0.16
ERBB3-217ENST00000551085 CDK13Q14004 1512 aaKnown RBP14.06□□□□□ -0.16
ERBB3-217ENST00000551085 KIF14Q15058 1648 aa14.06□□□□□ -0.16
ERBB3-217ENST00000551085 RLBP1P12271 317 aa14.06□□□□□ -0.16
ERBB3-217ENST00000551085 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
ERBB3-217ENST00000551085 GCC2Q8IWJ2 1684 aa14.06□□□□□ -0.16
ERBB3-217ENST00000551085 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
ERBB3-217ENST00000551085 RBSNQ9H1K0 784 aa14.05□□□□□ -0.16
ERBB3-217ENST00000551085 REC8O95072 547 aa14.05□□□□□ -0.16
ERBB3-217ENST00000551085 INTS3Q68E01 1043 aaKnown RBP14.05□□□□□ -0.16
ERBB3-217ENST00000551085 ATF7IPQ6VMQ6 1270 aa14.05□□□□□ -0.16
ERBB3-217ENST00000551085 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
ERBB3-217ENST00000551085 LRSAM1Q6UWE0 723 aa14.04□□□□□ -0.16
ERBB3-217ENST00000551085 ZNF445P59923 1031 aa14.04□□□□□ -0.16
ERBB3-217ENST00000551085 TNNQ9UQP3 1299 aa14.04□□□□□ -0.16
ERBB3-217ENST00000551085 DENND4BO75064 1496 aaPredicted RBP14.04□□□□□ -0.16
ERBB3-217ENST00000551085 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
ERBB3-217ENST00000551085 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
ERBB3-217ENST00000551085 KDM6BO15054 1643 aa14.04□□□□□ -0.16
ERBB3-217ENST00000551085 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
ERBB3-217ENST00000551085 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
ERBB3-217ENST00000551085 GAS2L2Q8NHY3 880 aa14.03□□□□□ -0.16
ERBB3-217ENST00000551085 PRDM4Q9UKN5 801 aa14.03□□□□□ -0.16
ERBB3-217ENST00000551085 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
ERBB3-217ENST00000551085 RBM25P49756 843 aaKnown RBP14.03□□□□□ -0.16
ERBB3-217ENST00000551085 TPM3P06753 285 aa14.02□□□□□ -0.16
ERBB3-217ENST00000551085 ZNF592Q92610 1267 aa14.02□□□□□ -0.16
ERBB3-217ENST00000551085 TSR2Q969E8 191 aaKnown RBP14.02□□□□□ -0.16
ERBB3-217ENST00000551085 NOB1Q9ULX3 412 aaKnown RBP14.02□□□□□ -0.16
ERBB3-217ENST00000551085 KDM5CP41229 1560 aa14.02□□□□□ -0.16
ERBB3-217ENST00000551085 FAM184AQ8NB25 1140 aa14.02□□□□□ -0.16
ERBB3-217ENST00000551085 MYRIPQ8NFW9 859 aa14.02□□□□□ -0.16
ERBB3-217ENST00000551085 GCC1Q96CN9 775 aa14.02□□□□□ -0.16
ERBB3-217ENST00000551085 IGSF3O75054 1194 aa14.01□□□□□ -0.17
ERBB3-217ENST00000551085 NOLC1Q14978 699 aaKnown RBP eCLIP14.01□□□□□ -0.171e-6■■□□□ 11.8
ERBB3-217ENST00000551085 IFT57Q9NWB7 429 aa14.01□□□□□ -0.17
ERBB3-217ENST00000551085 PZPP20742 1482 aa14.01□□□□□ -0.17
ERBB3-217ENST00000551085 BMP2KLQ5H9B9 411 aa14.01□□□□□ -0.17
ERBB3-217ENST00000551085 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
ERBB3-217ENST00000551085 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
ERBB3-217ENST00000551085 BCORL1Q5H9F3 1711 aa14.01□□□□□ -0.17
ERBB3-217ENST00000551085 CT47B1P0C2W7 299 aaPredicted RBP14.01□□□□□ -0.17
ERBB3-217ENST00000551085 HDAC1Q13547 482 aaPredicted RBP14.01□□□□□ -0.17
ERBB3-217ENST00000551085 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
ERBB3-217ENST00000551085 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
ERBB3-217ENST00000551085 TESK2Q96S53 571 aa14□□□□□ -0.17
ERBB3-217ENST00000551085 ZNF521Q96K83 1311 aa14□□□□□ -0.17
ERBB3-217ENST00000551085 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
ERBB3-217ENST00000551085 TMEM57Q8N5G2 664 aa13.99□□□□□ -0.17
ERBB3-217ENST00000551085 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
ERBB3-217ENST00000551085 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
ERBB3-217ENST00000551085 TBC1D9Q6ZT07 1266 aa13.99□□□□□ -0.17
ERBB3-217ENST00000551085 ZNF830Q96NB3 372 aaPredicted RBP13.99□□□□□ -0.17
ERBB3-217ENST00000551085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
ERBB3-217ENST00000551085 SPC24Q8NBT2 197 aa13.98□□□□□ -0.17
ERBB3-217ENST00000551085 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
ERBB3-217ENST00000551085 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
ERBB3-217ENST00000551085 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
ERBB3-217ENST00000551085 KCNJ4P48050 445 aa13.98□□□□□ -0.17
ERBB3-217ENST00000551085 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
ERBB3-217ENST00000551085 TSC1Q92574 1164 aa13.98□□□□□ -0.17
ERBB3-217ENST00000551085 C1orf115Q9H7X2 142 aa13.98□□□□□ -0.17
ERBB3-217ENST00000551085 ARHGEF12Q9NZN5 1544 aa13.98□□□□□ -0.17
ERBB3-217ENST00000551085 HTATSF1O43719 755 aaKnown RBP13.97□□□□□ -0.17
ERBB3-217ENST00000551085 NRDCO43847 1150 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 TRIM27P14373 513 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 MTHFSP49914 203 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 NEK4P51957 841 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 RSPH4AQ5TD94 716 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 ATP6V1DQ9Y5K8 247 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 POLA1P09884 1462 aaPredicted RBP13.97□□□□□ -0.17
ERBB3-217ENST00000551085 C9orf84Q5VXU9 1444 aa13.97□□□□□ -0.17
ERBB3-217ENST00000551085 CUL7Q14999 1698 aa13.96□□□□□ -0.17
ERBB3-217ENST00000551085 IBTKQ9P2D0 1353 aaPredicted RBP13.96□□□□□ -0.17
ERBB3-217ENST00000551085 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.17
ERBB3-217ENST00000551085 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.17
ERBB3-217ENST00000551085 TTC12Q9H892 705 aaPredicted RBP13.96□□□□□ -0.18
ERBB3-217ENST00000551085 COL17A1Q9UMD9 1497 aaPredicted RBP13.96□□□□□ -0.18
ERBB3-217ENST00000551085 ERICH4A6NGS2 130 aa13.95□□□□□ -0.18
ERBB3-217ENST00000551085 NUCB1Q02818 461 aa13.95□□□□□ -0.18
ERBB3-217ENST00000551085 SSH1Q8WYL5 1049 aa13.95□□□□□ -0.18
ERBB3-217ENST00000551085 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
ERBB3-217ENST00000551085 CCDC112Q8NEF3 446 aa13.95□□□□□ -0.18
ERBB3-217ENST00000551085 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms