RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 RWDD1Q9H446 243 aaPredicted RBP15.26■□□□□ 0.03
NR4A1-215ENST00000550557 TPRNQ4KMQ1 711 aa15.25■□□□□ 0.03
NR4A1-215ENST00000550557 IDI1Q13907 227 aa15.25■□□□□ 0.03
NR4A1-215ENST00000550557 NBPF1Q3BBV0 1214 aa15.24■□□□□ 0.03
NR4A1-215ENST00000550557 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
NR4A1-215ENST00000550557 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
NR4A1-215ENST00000550557 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
NR4A1-215ENST00000550557 CADPS2Q86UW7 1296 aa15.22■□□□□ 0.03
NR4A1-215ENST00000550557 APAF1O14727 1248 aa15.22■□□□□ 0.03
NR4A1-215ENST00000550557 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
NR4A1-215ENST00000550557 FOXO3O43524 673 aa15.22■□□□□ 0.03
NR4A1-215ENST00000550557 HSPA2P54652 639 aa15.22■□□□□ 0.03
NR4A1-215ENST00000550557 SLC12A5Q9H2X9 1139 aa15.22■□□□□ 0.03
NR4A1-215ENST00000550557 VPS37DQ86XT2 251 aa15.22■□□□□ 0.03
NR4A1-215ENST00000550557 ITSN2Q9NZM3 1697 aa15.21■□□□□ 0.03
NR4A1-215ENST00000550557 GAS2L2Q8NHY3 880 aa15.21■□□□□ 0.03
NR4A1-215ENST00000550557 TNRQ92752 1358 aa15.21■□□□□ 0.03
NR4A1-215ENST00000550557 TOMM22Q9NS69 142 aa15.21■□□□□ 0.03
NR4A1-215ENST00000550557 TRIM44Q96DX7 344 aaPredicted RBP15.2■□□□□ 0.02
NR4A1-215ENST00000550557 RTN4Q9NQC3 1192 aaKnown RBP15.2■□□□□ 0.02
NR4A1-215ENST00000550557 C11orf95C9JLR9 678 aaPredicted RBP15.2■□□□□ 0.02
NR4A1-215ENST00000550557 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
NR4A1-215ENST00000550557 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
NR4A1-215ENST00000550557 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
NR4A1-215ENST00000550557 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
NR4A1-215ENST00000550557 RRP1P56182 461 aaKnown RBP15.2■□□□□ 0.02
NR4A1-215ENST00000550557 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
NR4A1-215ENST00000550557 HMGB2P26583 209 aaKnown RBP15.19■□□□□ 0.02
NR4A1-215ENST00000550557 MTHFSP49914 203 aa15.19■□□□□ 0.02
NR4A1-215ENST00000550557 SPG7Q9UQ90 795 aa15.19■□□□□ 0.02
NR4A1-215ENST00000550557 AIMP1Q12904 312 aaKnown RBP15.19■□□□□ 0.02
NR4A1-215ENST00000550557 PHF8Q9UPP1 1060 aa15.19■□□□□ 0.02
NR4A1-215ENST00000550557 GNL2Q13823 731 aaKnown RBP15.19■□□□□ 0.02
NR4A1-215ENST00000550557 CCDC184Q52MB2 194 aa15.19■□□□□ 0.02
NR4A1-215ENST00000550557 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
NR4A1-215ENST00000550557 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
NR4A1-215ENST00000550557 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
NR4A1-215ENST00000550557 DHX29Q7Z478 1369 aaKnown RBP15.18■□□□□ 0.02
NR4A1-215ENST00000550557 TARBP1Q13395 1621 aaKnown RBP15.18■□□□□ 0.02
NR4A1-215ENST00000550557 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
NR4A1-215ENST00000550557 ATP10BO94823 1461 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 CABP4P57796 275 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 GNAI1P63096 354 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 DISP1Q96F81 1524 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 E9PSI1 815 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 HSP90AB1P08238 724 aaKnown RBP15.17■□□□□ 0.02
NR4A1-215ENST00000550557 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
NR4A1-215ENST00000550557 WDR7Q9Y4E6 1490 aa15.16■□□□□ 0.02
NR4A1-215ENST00000550557 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
NR4A1-215ENST00000550557 ZNF530Q6P9A1 599 aaPredicted RBP15.16■□□□□ 0.02
NR4A1-215ENST00000550557 CLSTN1O94985 981 aa15.15■□□□□ 0.02
NR4A1-215ENST00000550557 MSH6P52701 1360 aa15.15■□□□□ 0.02
NR4A1-215ENST00000550557 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
NR4A1-215ENST00000550557 PNISRQ8TF01 805 aaKnown RBP15.15■□□□□ 0.02
NR4A1-215ENST00000550557 LRPPRCP42704 1394 aaKnown RBP15.14■□□□□ 0.01
NR4A1-215ENST00000550557 PLCH2O75038 1416 aa15.13■□□□□ 0.01
NR4A1-215ENST00000550557 GOLGA6L4A6NEF3 574 aa15.13■□□□□ 0.01
NR4A1-215ENST00000550557 SULT6B1Q6IMI4 303 aa15.13■□□□□ 0.01
NR4A1-215ENST00000550557 KIF6Q6ZMV9 814 aa15.13■□□□□ 0.01
NR4A1-215ENST00000550557 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
NR4A1-215ENST00000550557 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
NR4A1-215ENST00000550557 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
NR4A1-215ENST00000550557 FAM135AQ9P2D6 1515 aa15.12■□□□□ 0.01
NR4A1-215ENST00000550557 DNMT1P26358 1616 aaKnown RBP15.12■□□□□ 0.01
NR4A1-215ENST00000550557 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
NR4A1-215ENST00000550557 PRKAR2BP31323 418 aa15.11■□□□□ 0.01
NR4A1-215ENST00000550557 NUP160Q12769 1436 aa15.11■□□□□ 0.01
NR4A1-215ENST00000550557 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
NR4A1-215ENST00000550557 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
NR4A1-215ENST00000550557 KRT28Q7Z3Y7 464 aa15.1■□□□□ 0.01
NR4A1-215ENST00000550557 PDE4AP27815 886 aa15.09■□□□□ 0.01
NR4A1-215ENST00000550557 CTDP1Q9Y5B0 961 aaPredicted RBP15.09■□□□□ 0.01
NR4A1-215ENST00000550557 G3BP1Q13283 466 aaKnown RBP eCLIP15.09■□□□□ 0.01
NR4A1-215ENST00000550557 RAD21O60216 631 aa15.08■□□□□ 0
NR4A1-215ENST00000550557 PLIN1O60240 522 aa15.08■□□□□ 0
NR4A1-215ENST00000550557 RRS1Q15050 365 aaKnown RBP15.08■□□□□ 0
NR4A1-215ENST00000550557 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0
NR4A1-215ENST00000550557 HSCBQ8IWL3 235 aa15.07■□□□□ 0
NR4A1-215ENST00000550557 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
NR4A1-215ENST00000550557 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
NR4A1-215ENST00000550557 WASLO00401 505 aaPredicted RBP15.06■□□□□ 0
NR4A1-215ENST00000550557 CRBNQ96SW2 442 aa15.06■□□□□ 0
NR4A1-215ENST00000550557 PPP2R1AP30153 589 aa15.05■□□□□ 0
NR4A1-215ENST00000550557 CWC22Q9HCG8 908 aaKnown RBP15.05■□□□□ 0
NR4A1-215ENST00000550557 ADAMTS8Q9UP79 889 aa15.05■□□□□ 0
NR4A1-215ENST00000550557 A2MP01023 1474 aa15.05■□□□□ -0
NR4A1-215ENST00000550557 RALGAPBQ86X10 1494 aa15.05■□□□□ -0
NR4A1-215ENST00000550557 GCC2Q8IWJ2 1684 aa15.05■□□□□ -0
NR4A1-215ENST00000550557 NCKAP5LQ9HCH0 1330 aa15.05■□□□□ -0
NR4A1-215ENST00000550557 IFIT2P09913 472 aaKnown RBP15.04■□□□□ -0
NR4A1-215ENST00000550557 LMTK3Q96Q04 1460 aa15.04■□□□□ -0
NR4A1-215ENST00000550557 EXOC5O00471 708 aa15.04■□□□□ -0
NR4A1-215ENST00000550557 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
NR4A1-215ENST00000550557 ABCC2Q92887 1545 aa15.04■□□□□ -0
NR4A1-215ENST00000550557 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
NR4A1-215ENST00000550557 ADGRF5Q8IZF2 1346 aa15.04■□□□□ -0
NR4A1-215ENST00000550557 ADGRL2O95490 1459 aa15.03■□□□□ -0
NR4A1-215ENST00000550557 VPS53Q5VIR6 699 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms