RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
RAB5C-206ENST00000550406 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
RAB5C-206ENST00000550406 ADGRB2O60241 1585 aa18.48■□□□□ 0.55
RAB5C-206ENST00000550406 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
RAB5C-206ENST00000550406 MINK1Q8N4C8 1332 aaPredicted RBP18.48■□□□□ 0.55
RAB5C-206ENST00000550406 MSH6P52701 1360 aa18.47■□□□□ 0.55
RAB5C-206ENST00000550406 USP47Q96K76 1375 aa18.47■□□□□ 0.55
RAB5C-206ENST00000550406 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
RAB5C-206ENST00000550406 RGPD8O14715 1765 aaPredicted RBP18.47■□□□□ 0.55
RAB5C-206ENST00000550406 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
RAB5C-206ENST00000550406 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
RAB5C-206ENST00000550406 CDC42BPGQ6DT37 1551 aa18.46■□□□□ 0.55
RAB5C-206ENST00000550406 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
RAB5C-206ENST00000550406 ZEB1P37275 1124 aaPredicted RBP18.45■□□□□ 0.54
RAB5C-206ENST00000550406 DCCP43146 1447 aa18.44■□□□□ 0.54
RAB5C-206ENST00000550406 TESK2Q96S53 571 aa18.44■□□□□ 0.54
RAB5C-206ENST00000550406 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
RAB5C-206ENST00000550406 TULP4Q9NRJ4 1543 aa18.43■□□□□ 0.54
RAB5C-206ENST00000550406 MST1RQ04912 1400 aa18.42■□□□□ 0.54
RAB5C-206ENST00000550406 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
RAB5C-206ENST00000550406 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
RAB5C-206ENST00000550406 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
RAB5C-206ENST00000550406 ATF3P18847 181 aa18.41■□□□□ 0.54
RAB5C-206ENST00000550406 CADPS2Q86UW7 1296 aa18.41■□□□□ 0.54
RAB5C-206ENST00000550406 UBAP1LF5GYI3 381 aa18.4■□□□□ 0.54
RAB5C-206ENST00000550406 EIF4G2P78344 907 aaKnown RBP eCLIP18.4■□□□□ 0.54
RAB5C-206ENST00000550406 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
RAB5C-206ENST00000550406 SLAIN2Q9P270 581 aa18.39■□□□□ 0.53
RAB5C-206ENST00000550406 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
RAB5C-206ENST00000550406 TOM1O60784 492 aa18.38■□□□□ 0.53
RAB5C-206ENST00000550406 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
RAB5C-206ENST00000550406 C1orf167Q5SNV9 1468 aa18.38■□□□□ 0.53
RAB5C-206ENST00000550406 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
RAB5C-206ENST00000550406 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
RAB5C-206ENST00000550406 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
RAB5C-206ENST00000550406 ATP7BP35670 1465 aa18.34■□□□□ 0.53
RAB5C-206ENST00000550406 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
RAB5C-206ENST00000550406 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
RAB5C-206ENST00000550406 ORAI2Q96SN7 254 aa18.34■□□□□ 0.53
RAB5C-206ENST00000550406 NUDT16Q96DE0 195 aaKnown RBP18.33■□□□□ 0.52
RAB5C-206ENST00000550406 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
RAB5C-206ENST00000550406 ITSN1Q15811 1721 aa18.32■□□□□ 0.52
RAB5C-206ENST00000550406 PIP4K2BP78356 416 aa18.32■□□□□ 0.52
RAB5C-206ENST00000550406 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
RAB5C-206ENST00000550406 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
RAB5C-206ENST00000550406 BRINP3Q76B58 766 aa18.31■□□□□ 0.52
RAB5C-206ENST00000550406 FBXO41Q8TF61 875 aa18.31■□□□□ 0.52
RAB5C-206ENST00000550406 TMF1P82094 1093 aa18.29■□□□□ 0.52
RAB5C-206ENST00000550406 ESCO1Q5FWF5 840 aa18.29■□□□□ 0.52
RAB5C-206ENST00000550406 NHSL1Q5SYE7 1610 aa18.29■□□□□ 0.52
RAB5C-206ENST00000550406 PUS7Q96PZ0 661 aaKnown RBP18.28■□□□□ 0.52
RAB5C-206ENST00000550406 KIF1AQ12756 1690 aa18.28■□□□□ 0.52
RAB5C-206ENST00000550406 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
RAB5C-206ENST00000550406 SLC24A1O60721 1099 aa18.27■□□□□ 0.52
RAB5C-206ENST00000550406 DDX17Q92841 729 aaKnown RBP18.27■□□□□ 0.52
RAB5C-206ENST00000550406 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.52
RAB5C-206ENST00000550406 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
RAB5C-206ENST00000550406 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
RAB5C-206ENST00000550406 PPIP5K1Q6PFW1 1433 aa18.25■□□□□ 0.51
RAB5C-206ENST00000550406 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
RAB5C-206ENST00000550406 MYOM1P52179 1685 aa18.25■□□□□ 0.51
RAB5C-206ENST00000550406 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
RAB5C-206ENST00000550406 AHDC1Q5TGY3 1603 aaPredicted RBP18.24■□□□□ 0.51
RAB5C-206ENST00000550406 CABP1Q9NZU7 370 aa18.24■□□□□ 0.51
RAB5C-206ENST00000550406 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
RAB5C-206ENST00000550406 PHLPP1O60346 1717 aa18.23■□□□□ 0.51
RAB5C-206ENST00000550406 FOXO3O43524 673 aa18.22■□□□□ 0.51
RAB5C-206ENST00000550406 CD163L1Q9NR16 1453 aa18.21■□□□□ 0.51
RAB5C-206ENST00000550406 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.51
RAB5C-206ENST00000550406 SLC12A5Q9H2X9 1139 aa18.21■□□□□ 0.51
RAB5C-206ENST00000550406 ACEP12821 1306 aa18.21■□□□□ 0.51
RAB5C-206ENST00000550406 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
RAB5C-206ENST00000550406 PXDNQ92626 1479 aa18.2■□□□□ 0.5
RAB5C-206ENST00000550406 COL16A1Q07092 1604 aaPredicted RBP18.2■□□□□ 0.5
RAB5C-206ENST00000550406 KIF7Q2M1P5 1343 aa18.2■□□□□ 0.5
RAB5C-206ENST00000550406 HSPA1LP34931 641 aa18.19■□□□□ 0.5
RAB5C-206ENST00000550406 CDCA8Q53HL2 280 aa18.19■□□□□ 0.5
RAB5C-206ENST00000550406 SOS2Q07890 1332 aaPredicted RBP18.19■□□□□ 0.5
RAB5C-206ENST00000550406 CPSF1Q10570 1443 aaKnown RBP18.18■□□□□ 0.5
RAB5C-206ENST00000550406 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
RAB5C-206ENST00000550406 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
RAB5C-206ENST00000550406 WASHC2AQ641Q2 1341 aa18.18■□□□□ 0.5
RAB5C-206ENST00000550406 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
RAB5C-206ENST00000550406 KRT28Q7Z3Y7 464 aa18.17■□□□□ 0.5
RAB5C-206ENST00000550406 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
RAB5C-206ENST00000550406 NPHP3Q7Z494 1330 aa18.17■□□□□ 0.5
RAB5C-206ENST00000550406 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
RAB5C-206ENST00000550406 POLR3GLQ9BT43 218 aa18.16■□□□□ 0.5
RAB5C-206ENST00000550406 PSME1Q06323 249 aa18.15■□□□□ 0.5
RAB5C-206ENST00000550406 NRKQ7Z2Y5 1582 aa18.14■□□□□ 0.49
RAB5C-206ENST00000550406 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
RAB5C-206ENST00000550406 NINLQ9Y2I6 1382 aa18.14■□□□□ 0.49
RAB5C-206ENST00000550406 SSH2Q76I76 1423 aa18.14■□□□□ 0.49
RAB5C-206ENST00000550406 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
RAB5C-206ENST00000550406 USP6P35125 1406 aa18.13■□□□□ 0.49
RAB5C-206ENST00000550406 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
RAB5C-206ENST00000550406 SBNO1A3KN83 1393 aa18.11■□□□□ 0.49
RAB5C-206ENST00000550406 KTN1Q86UP2 1357 aaKnown RBP18.1■□□□□ 0.49
RAB5C-206ENST00000550406 ANKRD36BQ8N2N9 1353 aa18.1■□□□□ 0.49
RAB5C-206ENST00000550406 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms