RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PPP1R12CQ9BZL4 782 aa10.29□□□□□ -0.76
TGFBR1-208ENST00000550253 PCDHGC3Q9UN70 934 aa10.29□□□□□ -0.76
TGFBR1-208ENST00000550253 FDX1P10109 184 aa10.28□□□□□ -0.76
TGFBR1-208ENST00000550253 KCNA1Q09470 495 aa10.28□□□□□ -0.76
TGFBR1-208ENST00000550253 ERCC6Q03468 1493 aa10.28□□□□□ -0.76
TGFBR1-208ENST00000550253 PTPREP23469 700 aa10.28□□□□□ -0.76
TGFBR1-208ENST00000550253 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
TGFBR1-208ENST00000550253 ALG2Q9H553 416 aa10.28□□□□□ -0.76
TGFBR1-208ENST00000550253 VAC14Q08AM6 782 aa10.27□□□□□ -0.77
TGFBR1-208ENST00000550253 NESP48681 1621 aa10.27□□□□□ -0.77
TGFBR1-208ENST00000550253 ATAD2BQ9ULI0 1458 aa10.26□□□□□ -0.77
TGFBR1-208ENST00000550253 CSB-PGBD3P0DP91 1061 aa10.26□□□□□ -0.77
TGFBR1-208ENST00000550253 FOXD4L5Q5VV16 416 aaPredicted RBP10.26□□□□□ -0.77
TGFBR1-208ENST00000550253 FOXD4L4Q8WXT5 416 aaPredicted RBP10.26□□□□□ -0.77
TGFBR1-208ENST00000550253 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
TGFBR1-208ENST00000550253 SMAPO00193 183 aa10.25□□□□□ -0.77
TGFBR1-208ENST00000550253 RIMBP2O15034 1052 aa10.25□□□□□ -0.77
TGFBR1-208ENST00000550253 PALM3A6NDB9 673 aaPredicted RBP10.24□□□□□ -0.77
TGFBR1-208ENST00000550253 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
TGFBR1-208ENST00000550253 LRRN4Q8WUT4 740 aa10.24□□□□□ -0.77
TGFBR1-208ENST00000550253 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
TGFBR1-208ENST00000550253 HLA-CQ95604 372 aa10.23□□□□□ -0.77
TGFBR1-208ENST00000550253 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
TGFBR1-208ENST00000550253 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
TGFBR1-208ENST00000550253 SLC10A3P09131 477 aa10.23□□□□□ -0.77
TGFBR1-208ENST00000550253 MTMR2Q13614 643 aa10.23□□□□□ -0.77
TGFBR1-208ENST00000550253 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
TGFBR1-208ENST00000550253 HELBQ8NG08 1087 aaPredicted RBP10.22□□□□□ -0.77
TGFBR1-208ENST00000550253 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
TGFBR1-208ENST00000550253 PROX2Q3B8N5 592 aa10.21□□□□□ -0.78
TGFBR1-208ENST00000550253 EPS8L1Q8TE68 723 aa10.21□□□□□ -0.78
TGFBR1-208ENST00000550253 ZNF428Q96B54 188 aa10.21□□□□□ -0.78
TGFBR1-208ENST00000550253 THOC2Q8NI27 1593 aaKnown RBP10.21□□□□□ -0.78
TGFBR1-208ENST00000550253 CFAP99D6REC4 459 aa10.2□□□□□ -0.78
TGFBR1-208ENST00000550253 LMOD1P29536 600 aaPredicted RBP10.2□□□□□ -0.78
TGFBR1-208ENST00000550253 PRR7Q8TB68 274 aa10.2□□□□□ -0.78
TGFBR1-208ENST00000550253 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
TGFBR1-208ENST00000550253 SMARCA2P51531 1590 aa10.19□□□□□ -0.78
TGFBR1-208ENST00000550253 TMEM88BA6NKF7 163 aa10.17□□□□□ -0.78
TGFBR1-208ENST00000550253 ATG7O95352 703 aa10.17□□□□□ -0.78
TGFBR1-208ENST00000550253 SOX11P35716 441 aa10.17□□□□□ -0.78
TGFBR1-208ENST00000550253 RBM25P49756 843 aaKnown RBP10.17□□□□□ -0.78
TGFBR1-208ENST00000550253 TSC1Q92574 1164 aa10.17□□□□□ -0.78
TGFBR1-208ENST00000550253 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
TGFBR1-208ENST00000550253 VRTNQ9H8Y1 702 aa10.16□□□□□ -0.78
TGFBR1-208ENST00000550253 KIAA1468Q9P260 1216 aa10.16□□□□□ -0.78
TGFBR1-208ENST00000550253 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
TGFBR1-208ENST00000550253 KIF21AQ7Z4S6 1674 aa10.16□□□□□ -0.78
TGFBR1-208ENST00000550253 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
TGFBR1-208ENST00000550253 MAFBQ9Y5Q3 323 aaPredicted RBP10.15□□□□□ -0.78
TGFBR1-208ENST00000550253 C6orf229H3BNL8 230 aa10.13□□□□□ -0.79
TGFBR1-208ENST00000550253 CDCA8Q53HL2 280 aa10.13□□□□□ -0.79
TGFBR1-208ENST00000550253 SLF2Q8IX21 1173 aa10.13□□□□□ -0.79
TGFBR1-208ENST00000550253 BAZ1BQ9UIG0 1483 aaKnown RBP10.13□□□□□ -0.79
TGFBR1-208ENST00000550253 PEG3Q9GZU2 1588 aa10.13□□□□□ -0.79
TGFBR1-208ENST00000550253 SEMA3FQ13275 785 aa10.12□□□□□ -0.79
TGFBR1-208ENST00000550253 NR6A1Q15406 480 aa10.12□□□□□ -0.79
TGFBR1-208ENST00000550253 BAZ1AQ9NRL2 1556 aaPredicted RBP10.12□□□□□ -0.79
TGFBR1-208ENST00000550253 FUT2Q10981 343 aa10.12□□□□□ -0.79
TGFBR1-208ENST00000550253 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
TGFBR1-208ENST00000550253 KCNK17Q96T54 332 aa10.12□□□□□ -0.79
TGFBR1-208ENST00000550253 ZBED2Q9BTP6 218 aa10.12□□□□□ -0.79
TGFBR1-208ENST00000550253 CCDC27Q2M243 656 aa10.11□□□□□ -0.79
TGFBR1-208ENST00000550253 GRIPAP1Q4V328 841 aa10.11□□□□□ -0.79
TGFBR1-208ENST00000550253 SND1Q7KZF4 910 aaKnown RBP eCLIP10.11□□□□□ -0.79
TGFBR1-208ENST00000550253 PER1O15534 1290 aaPredicted RBP10.1□□□□□ -0.79
TGFBR1-208ENST00000550253 SYMPKQ92797 1274 aaKnown RBP10.1□□□□□ -0.79
TGFBR1-208ENST00000550253 LAMC3Q9Y6N6 1575 aa10.1□□□□□ -0.79
TGFBR1-208ENST00000550253 MROH2BQ7Z745 1585 aa10.09□□□□□ -0.79
TGFBR1-208ENST00000550253 AMOTL2Q9Y2J4 779 aa10.09□□□□□ -0.79
TGFBR1-208ENST00000550253 ATP9BO43861 1147 aa10.08□□□□□ -0.8
TGFBR1-208ENST00000550253 GNEQ9Y223 722 aaKnown RBP10.08□□□□□ -0.8
TGFBR1-208ENST00000550253 E9PSI1 815 aa10.07□□□□□ -0.8
TGFBR1-208ENST00000550253 HOXB1P14653 301 aaPredicted RBP10.07□□□□□ -0.8
TGFBR1-208ENST00000550253 ATP6V1AP38606 617 aa10.07□□□□□ -0.8
TGFBR1-208ENST00000550253 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
TGFBR1-208ENST00000550253 KANK4Q5T7N3 995 aaPredicted RBP10.07□□□□□ -0.8
TGFBR1-208ENST00000550253 PNMA1Q8ND90 353 aa10.07□□□□□ -0.8
TGFBR1-208ENST00000550253 RABGEF1Q9UJ41 708 aa10.07□□□□□ -0.8
TGFBR1-208ENST00000550253 ELOAQ14241 798 aaKnown RBP10.06□□□□□ -0.8
TGFBR1-208ENST00000550253 SEPT9Q9UHD8 586 aaPredicted RBP10.06□□□□□ -0.8
TGFBR1-208ENST00000550253 CFHP08603 1231 aa10.05□□□□□ -0.8
TGFBR1-208ENST00000550253 HDGFP51858 240 aaKnown RBP10.05□□□□□ -0.8
TGFBR1-208ENST00000550253 DESI1Q6ICB0 168 aa10.04□□□□□ -0.8
TGFBR1-208ENST00000550253 KCNH8Q96L42 1107 aa10.04□□□□□ -0.8
TGFBR1-208ENST00000550253 POTEB2H3BUK9 544 aa10.03□□□□□ -0.8
TGFBR1-208ENST00000550253 NR1H3Q13133 447 aa10.03□□□□□ -0.8
TGFBR1-208ENST00000550253 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
TGFBR1-208ENST00000550253 SLC4A3P48751 1232 aa10.02□□□□□ -0.8
TGFBR1-208ENST00000550253 PSEN2P49810 448 aa10.02□□□□□ -0.8
TGFBR1-208ENST00000550253 ZMIZ1Q9ULJ6 1067 aa10.02□□□□□ -0.8
TGFBR1-208ENST00000550253 FAM98CQ17RN3 349 aaKnown RBP10.02□□□□□ -0.81
TGFBR1-208ENST00000550253 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
TGFBR1-208ENST00000550253 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
TGFBR1-208ENST00000550253 TMEM164Q5U3C3 297 aa10.01□□□□□ -0.81
TGFBR1-208ENST00000550253 B4GALNT3Q6L9W6 998 aa10.01□□□□□ -0.81
TGFBR1-208ENST00000550253 LYPD8Q6UX82 237 aa10.01□□□□□ -0.81
TGFBR1-208ENST00000550253 SAMD7Q7Z3H4 446 aa10.01□□□□□ -0.81
TGFBR1-208ENST00000550253 NFATC2IPQ8NCF5 419 aa10.01□□□□□ -0.81
TGFBR1-208ENST00000550253 FBXO45P0C2W1 286 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms