RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 APLP1P51693 650 aa10.52□□□□□ -0.73
COX6A1-202ENST00000549525 GPCPD1Q9NPB8 672 aa10.52□□□□□ -0.73
COX6A1-202ENST00000549525 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.73
COX6A1-202ENST00000549525 RUSC2Q8N2Y8 1516 aa10.52□□□□□ -0.73
COX6A1-202ENST00000549525 CLCN1P35523 988 aa10.51□□□□□ -0.73
COX6A1-202ENST00000549525 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
COX6A1-202ENST00000549525 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
COX6A1-202ENST00000549525 PARP9Q8IXQ6 854 aa10.5□□□□□ -0.73
COX6A1-202ENST00000549525 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
COX6A1-202ENST00000549525 CFHP08603 1231 aa10.49□□□□□ -0.73
COX6A1-202ENST00000549525 PDE4DQ08499 809 aa10.49□□□□□ -0.73
COX6A1-202ENST00000549525 TTLL12Q14166 644 aaPredicted RBP10.49□□□□□ -0.73
COX6A1-202ENST00000549525 FAM217BQ9NTX9 383 aaPredicted RBP10.49□□□□□ -0.73
COX6A1-202ENST00000549525 ADAMTS12P58397 1594 aa10.48□□□□□ -0.73
COX6A1-202ENST00000549525 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
COX6A1-202ENST00000549525 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
COX6A1-202ENST00000549525 RDH13Q8NBN7 331 aa10.48□□□□□ -0.73
COX6A1-202ENST00000549525 GRIN2AQ12879 1464 aa10.48□□□□□ -0.73
COX6A1-202ENST00000549525 CD46P15529 392 aa10.47□□□□□ -0.73
COX6A1-202ENST00000549525 GIGYF2Q6Y7W6 1299 aaKnown RBP10.47□□□□□ -0.73
COX6A1-202ENST00000549525 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
COX6A1-202ENST00000549525 KIF21BO75037 1637 aa10.45□□□□□ -0.74
COX6A1-202ENST00000549525 GOLGA3Q08378 1498 aa10.45□□□□□ -0.74
COX6A1-202ENST00000549525 ACTN4O43707 911 aaKnown RBP10.44□□□□□ -0.74
COX6A1-202ENST00000549525 GCGRP47871 477 aa10.44□□□□□ -0.74
COX6A1-202ENST00000549525 MS4A1P11836 297 aa10.43□□□□□ -0.74
COX6A1-202ENST00000549525 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
COX6A1-202ENST00000549525 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
COX6A1-202ENST00000549525 NUP160Q12769 1436 aa10.42□□□□□ -0.74
COX6A1-202ENST00000549525 KMT5BQ4FZB7 885 aa10.42□□□□□ -0.74
COX6A1-202ENST00000549525 TJAP1Q5JTD0 557 aa10.42□□□□□ -0.74
COX6A1-202ENST00000549525 KIAA0586Q9BVV6 1533 aa10.42□□□□□ -0.74
COX6A1-202ENST00000549525 ITGBL1O95965 494 aaPredicted RBP10.41□□□□□ -0.74
COX6A1-202ENST00000549525 MTRQ99707 1265 aa10.41□□□□□ -0.74
COX6A1-202ENST00000549525 PRR14Q9BWN1 585 aa10.41□□□□□ -0.74
COX6A1-202ENST00000549525 GPBP1L1Q9HC44 474 aaPredicted RBP10.41□□□□□ -0.74
COX6A1-202ENST00000549525 CHD1O14646 1710 aa10.41□□□□□ -0.74
COX6A1-202ENST00000549525 FUT2Q10981 343 aa10.39□□□□□ -0.75
COX6A1-202ENST00000549525 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
COX6A1-202ENST00000549525 PLA2G2EQ9NZK7 142 aa10.39□□□□□ -0.75
COX6A1-202ENST00000549525 PCDHB3Q9Y5E6 796 aa10.39□□□□□ -0.75
COX6A1-202ENST00000549525 COPS2P61201 443 aa10.38□□□□□ -0.75
COX6A1-202ENST00000549525 TNIKQ9UKE5 1360 aa10.38□□□□□ -0.75
COX6A1-202ENST00000549525 PUS10Q3MIT2 529 aaKnown RBP10.37□□□□□ -0.75
COX6A1-202ENST00000549525 CARMIL2Q6F5E8 1435 aa10.37□□□□□ -0.75
COX6A1-202ENST00000549525 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
COX6A1-202ENST00000549525 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
COX6A1-202ENST00000549525 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
COX6A1-202ENST00000549525 IQGAP2Q13576 1575 aa10.35□□□□□ -0.75
COX6A1-202ENST00000549525 KDM4AO75164 1064 aa10.35□□□□□ -0.75
COX6A1-202ENST00000549525 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
COX6A1-202ENST00000549525 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
COX6A1-202ENST00000549525 BRPF1P55201 1214 aaPredicted RBP10.34□□□□□ -0.75
COX6A1-202ENST00000549525 MORN1Q5T089 497 aa10.34□□□□□ -0.75
COX6A1-202ENST00000549525 HLA-CQ95604 372 aa10.34□□□□□ -0.75
COX6A1-202ENST00000549525 LOC105371045A0A1W2PR82 267 aa10.33□□□□□ -0.76
COX6A1-202ENST00000549525 ATP6V1AP38606 617 aa10.33□□□□□ -0.76
COX6A1-202ENST00000549525 KCNC4Q03721 635 aa10.33□□□□□ -0.76
COX6A1-202ENST00000549525 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
COX6A1-202ENST00000549525 CLASP1Q7Z460 1538 aa10.33□□□□□ -0.76
COX6A1-202ENST00000549525 CTTNBP2Q8WZ74 1663 aa10.32□□□□□ -0.76
COX6A1-202ENST00000549525 HOXA2O43364 376 aa10.32□□□□□ -0.76
COX6A1-202ENST00000549525 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
COX6A1-202ENST00000549525 ZPR1O75312 459 aa10.31□□□□□ -0.76
COX6A1-202ENST00000549525 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
COX6A1-202ENST00000549525 SLC27A5Q9Y2P5 690 aa10.31□□□□□ -0.76
COX6A1-202ENST00000549525 UGGT2Q9NYU1 1516 aa10.31□□□□□ -0.76
COX6A1-202ENST00000549525 PRG4Q92954 1404 aaPredicted RBP10.31□□□□□ -0.76
COX6A1-202ENST00000549525 TLL1O43897 1013 aa10.3□□□□□ -0.76
COX6A1-202ENST00000549525 USP46P62068 366 aa10.3□□□□□ -0.76
COX6A1-202ENST00000549525 NEUROD2Q15784 382 aa10.3□□□□□ -0.76
COX6A1-202ENST00000549525 NUTM1Q86Y26 1132 aa10.3□□□□□ -0.76
COX6A1-202ENST00000549525 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
COX6A1-202ENST00000549525 FAM117AQ9C073 453 aa10.3□□□□□ -0.76
COX6A1-202ENST00000549525 NR1I2O75469 434 aa10.29□□□□□ -0.76
COX6A1-202ENST00000549525 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
COX6A1-202ENST00000549525 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
COX6A1-202ENST00000549525 TBC1D2Q9BYX2 928 aa10.29□□□□□ -0.76
COX6A1-202ENST00000549525 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
COX6A1-202ENST00000549525 CLIP1P30622 1438 aa10.27□□□□□ -0.77
COX6A1-202ENST00000549525 SHROOM2Q13796 1616 aa10.27□□□□□ -0.77
COX6A1-202ENST00000549525 PLEKHG3A1L390 1219 aa10.27□□□□□ -0.77
COX6A1-202ENST00000549525 NDUFV2P19404 249 aa10.27□□□□□ -0.77
COX6A1-202ENST00000549525 THAP11Q96EK4 314 aa10.27□□□□□ -0.77
COX6A1-202ENST00000549525 MOXD2PA6NHM9 499 aa10.26□□□□□ -0.77
COX6A1-202ENST00000549525 GRIPAP1Q4V328 841 aa10.26□□□□□ -0.77
COX6A1-202ENST00000549525 PTPRGP23470 1445 aa10.25□□□□□ -0.77
COX6A1-202ENST00000549525 RNF19BQ6ZMZ0 732 aa10.25□□□□□ -0.77
COX6A1-202ENST00000549525 PCDHGC3Q9UN70 934 aa10.25□□□□□ -0.77
COX6A1-202ENST00000549525 CEP162Q5TB80 1403 aa10.24□□□□□ -0.77
COX6A1-202ENST00000549525 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
COX6A1-202ENST00000549525 A0A0G2JS52 829 aa10.23□□□□□ -0.77
COX6A1-202ENST00000549525 MYSM1Q5VVJ2 828 aa10.23□□□□□ -0.77
COX6A1-202ENST00000549525 BRICD5Q6PL45 260 aa10.23□□□□□ -0.77
COX6A1-202ENST00000549525 ARHGEF11O15085 1522 aa10.23□□□□□ -0.77
COX6A1-202ENST00000549525 DISP1Q96F81 1524 aa10.23□□□□□ -0.77
COX6A1-202ENST00000549525 ADH1BP00325 375 aa10.22□□□□□ -0.77
COX6A1-202ENST00000549525 FDX1P10109 184 aa10.22□□□□□ -0.77
COX6A1-202ENST00000549525 RSBN1LQ6PCB5 846 aaPredicted RBP10.22□□□□□ -0.77
COX6A1-202ENST00000549525 SPSB2Q99619 263 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms