RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
LINC02404-201ENST00000546710 PDE4DQ08499 809 aa11.17□□□□□ -0.62
LINC02404-201ENST00000546710 MSS51Q4VC12 460 aa11.17□□□□□ -0.62
LINC02404-201ENST00000546710 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
LINC02404-201ENST00000546710 BEGAINQ9BUH8 593 aa11.17□□□□□ -0.62
LINC02404-201ENST00000546710 MS4A1P11836 297 aa11.16□□□□□ -0.62
LINC02404-201ENST00000546710 USB1Q9BQ65 265 aaKnown RBP11.15□□□□□ -0.62
LINC02404-201ENST00000546710 FCF1Q9Y324 198 aaKnown RBP11.15□□□□□ -0.62
LINC02404-201ENST00000546710 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
LINC02404-201ENST00000546710 FDX1P10109 184 aa11.13□□□□□ -0.63
LINC02404-201ENST00000546710 SYMPKQ92797 1274 aaKnown RBP11.13□□□□□ -0.63
LINC02404-201ENST00000546710 MOXD2PA6NHM9 499 aa11.12□□□□□ -0.63
LINC02404-201ENST00000546710 NDUFV2P19404 249 aa11.12□□□□□ -0.63
LINC02404-201ENST00000546710 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
LINC02404-201ENST00000546710 MMP16P51512 607 aa11.1□□□□□ -0.63
LINC02404-201ENST00000546710 ZNF598Q86UK7 904 aaKnown RBP11.1□□□□□ -0.63
LINC02404-201ENST00000546710 TBC1D2Q9BYX2 928 aa11.1□□□□□ -0.63
LINC02404-201ENST00000546710 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
LINC02404-201ENST00000546710 ZNF697Q5TEC3 545 aa11.09□□□□□ -0.63
LINC02404-201ENST00000546710 DXOO77932 396 aaKnown RBP11.08□□□□□ -0.64
LINC02404-201ENST00000546710 TRIM67Q6ZTA4 783 aa11.08□□□□□ -0.64
LINC02404-201ENST00000546710 C6orf229H3BNL8 230 aa11.07□□□□□ -0.64
LINC02404-201ENST00000546710 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
LINC02404-201ENST00000546710 RETREG3Q86VR2 466 aa11.07□□□□□ -0.64
LINC02404-201ENST00000546710 RPIAP49247 311 aa11.06□□□□□ -0.64
LINC02404-201ENST00000546710 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
LINC02404-201ENST00000546710 CECR2Q9BXF3 1484 aa11.05□□□□□ -0.64
LINC02404-201ENST00000546710 JUNDP17535 347 aa11.04□□□□□ -0.64
LINC02404-201ENST00000546710 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
LINC02404-201ENST00000546710 TNFRSF10AO00220 468 aa11.02□□□□□ -0.65
LINC02404-201ENST00000546710 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.65
LINC02404-201ENST00000546710 SPTLC1O15269 473 aa11.01□□□□□ -0.65
LINC02404-201ENST00000546710 ZBTB24O43167 697 aaPredicted RBP11.01□□□□□ -0.65
LINC02404-201ENST00000546710 GDF9O60383 454 aa11.01□□□□□ -0.65
LINC02404-201ENST00000546710 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
LINC02404-201ENST00000546710 GJA5P36382 358 aa11.01□□□□□ -0.65
LINC02404-201ENST00000546710 CCDC24Q8N4L8 307 aa11.01□□□□□ -0.65
LINC02404-201ENST00000546710 CUX2O14529 1486 aa11□□□□□ -0.65
LINC02404-201ENST00000546710 MTMR2Q13614 643 aa11□□□□□ -0.65
LINC02404-201ENST00000546710 RIC3Q7Z5B4 369 aa11□□□□□ -0.65
LINC02404-201ENST00000546710 PRR20EP86478 221 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 PRR20CP86479 221 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 PRR20DP86480 221 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 PRR20BP86481 221 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 PRR20AP86496 221 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 FOXC1Q12948 553 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 MYSM1Q5VVJ2 828 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 PRR7Q8TB68 274 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 GPBP1L1Q9HC44 474 aaPredicted RBP10.99□□□□□ -0.65
LINC02404-201ENST00000546710 PKD2L1Q9P0L9 805 aa10.99□□□□□ -0.65
LINC02404-201ENST00000546710 SPDYE5A6NIY4 337 aa10.97□□□□□ -0.65
LINC02404-201ENST00000546710 TRIM32Q13049 653 aa10.97□□□□□ -0.65
LINC02404-201ENST00000546710 CSPP1Q1MSJ5 1256 aa10.97□□□□□ -0.65
LINC02404-201ENST00000546710 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
LINC02404-201ENST00000546710 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.65
LINC02404-201ENST00000546710 KDM4CQ9H3R0 1056 aa10.96□□□□□ -0.65
LINC02404-201ENST00000546710 LIMD1Q9UGP4 676 aa10.96□□□□□ -0.65
LINC02404-201ENST00000546710 HRCP23327 699 aa10.95□□□□□ -0.66
LINC02404-201ENST00000546710 CABLES1Q8TDN4 633 aa10.95□□□□□ -0.66
LINC02404-201ENST00000546710 ZBTB3Q9H5J0 574 aa10.94□□□□□ -0.66
LINC02404-201ENST00000546710 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
LINC02404-201ENST00000546710 CCNYL3P0C7X3 344 aa10.93□□□□□ -0.66
LINC02404-201ENST00000546710 PTCRAQ6ISU1 281 aaPredicted RBP10.93□□□□□ -0.66
LINC02404-201ENST00000546710 ZNF775Q96BV0 537 aaPredicted RBP10.93□□□□□ -0.66
LINC02404-201ENST00000546710 PTPRNQ16849 979 aa10.92□□□□□ -0.66
LINC02404-201ENST00000546710 PRPF38BQ5VTL8 546 aaKnown RBP10.92□□□□□ -0.66
LINC02404-201ENST00000546710 QPCTQ16769 361 aa10.91□□□□□ -0.66
LINC02404-201ENST00000546710 PKDCCQ504Y2 493 aa10.91□□□□□ -0.66
LINC02404-201ENST00000546710 DESI1Q6ICB0 168 aa10.91□□□□□ -0.66
LINC02404-201ENST00000546710 FAM117AQ9C073 453 aa10.91□□□□□ -0.66
LINC02404-201ENST00000546710 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
LINC02404-201ENST00000546710 POLR3EQ9NVU0 708 aa10.91□□□□□ -0.66
LINC02404-201ENST00000546710 FAM187AA6NFU0 413 aa10.9□□□□□ -0.66
LINC02404-201ENST00000546710 CLK2P49760 499 aaKnown RBP10.9□□□□□ -0.66
LINC02404-201ENST00000546710 DGAT1O75907 488 aa10.89□□□□□ -0.67
LINC02404-201ENST00000546710 SKOR1P84550 965 aa10.89□□□□□ -0.67
LINC02404-201ENST00000546710 TUSC1Q2TAM9 212 aa10.89□□□□□ -0.67
LINC02404-201ENST00000546710 EVA1BQ9NVM1 165 aa10.89□□□□□ -0.67
LINC02404-201ENST00000546710 NUTM2BA6NNL0 878 aaPredicted RBP10.88□□□□□ -0.67
LINC02404-201ENST00000546710 NUTM2EB1AL46 878 aaPredicted RBP10.88□□□□□ -0.67
LINC02404-201ENST00000546710 WNT7AO00755 349 aa10.88□□□□□ -0.67
LINC02404-201ENST00000546710 LILRB3O75022 631 aa10.88□□□□□ -0.67
LINC02404-201ENST00000546710 NUTM2DQ5VT03 806 aaPredicted RBP10.88□□□□□ -0.67
LINC02404-201ENST00000546710 NUTM2AQ8IVF1 878 aaPredicted RBP10.88□□□□□ -0.67
LINC02404-201ENST00000546710 CYP4X1Q8N118 509 aa10.88□□□□□ -0.67
LINC02404-201ENST00000546710 TOR4AQ9NXH8 423 aa10.88□□□□□ -0.67
LINC02404-201ENST00000546710 LYPD8Q6UX82 237 aa10.87□□□□□ -0.67
LINC02404-201ENST00000546710 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
LINC02404-201ENST00000546710 KCNH2Q12809 1159 aa10.86□□□□□ -0.67
LINC02404-201ENST00000546710 MRGPRX2Q96LB1 330 aa10.86□□□□□ -0.67
LINC02404-201ENST00000546710 UNC93B1Q9H1C4 597 aa10.86□□□□□ -0.67
LINC02404-201ENST00000546710 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
LINC02404-201ENST00000546710 WNT7BP56706 349 aa10.85□□□□□ -0.67
LINC02404-201ENST00000546710 MYT1Q01538 1121 aa10.85□□□□□ -0.67
LINC02404-201ENST00000546710 RTL5Q5HYW3 569 aaPredicted RBP10.85□□□□□ -0.67
LINC02404-201ENST00000546710 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
LINC02404-201ENST00000546710 TSC1Q92574 1164 aa10.85□□□□□ -0.67
LINC02404-201ENST00000546710 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
LINC02404-201ENST00000546710 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
LINC02404-201ENST00000546710 PER1O15534 1290 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms