RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
SOD2-216ENST00000546260 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
SOD2-216ENST00000546260 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
SOD2-216ENST00000546260 KRT222Q8N1A0 295 aa12.58□□□□□ -0.4
SOD2-216ENST00000546260 GAS2L2Q8NHY3 880 aa12.58□□□□□ -0.4
SOD2-216ENST00000546260 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
SOD2-216ENST00000546260 TNNT1P13805 278 aa12.58□□□□□ -0.4
SOD2-216ENST00000546260 GPS2Q13227 327 aa12.58□□□□□ -0.4
SOD2-216ENST00000546260 ADCY5O95622 1261 aa12.57□□□□□ -0.4
SOD2-216ENST00000546260 SECISBP2LQ93073 1101 aaKnown RBP12.57□□□□□ -0.4
SOD2-216ENST00000546260 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
SOD2-216ENST00000546260 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
SOD2-216ENST00000546260 MIA2Q96PC5 1412 aa12.57□□□□□ -0.4
SOD2-216ENST00000546260 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
SOD2-216ENST00000546260 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
SOD2-216ENST00000546260 GABPB1Q06547 395 aaPredicted RBP12.56□□□□□ -0.4
SOD2-216ENST00000546260 POLR3GO15318 223 aaPredicted RBP12.56□□□□□ -0.4
SOD2-216ENST00000546260 PPP2R1AP30153 589 aa12.56□□□□□ -0.4
SOD2-216ENST00000546260 ZNF445P59923 1031 aa12.56□□□□□ -0.4
SOD2-216ENST00000546260 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.56□□□□□ -0.4
SOD2-216ENST00000546260 V9GYY5 206 aaPredicted RBP12.56□□□□□ -0.4
SOD2-216ENST00000546260 CHMP4CQ96CF2 233 aa12.55□□□□□ -0.4
SOD2-216ENST00000546260 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
SOD2-216ENST00000546260 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
SOD2-216ENST00000546260 NOL10Q9BSC4 688 aaKnown RBP12.54□□□□□ -0.4
SOD2-216ENST00000546260 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
SOD2-216ENST00000546260 NOM1Q5C9Z4 860 aaKnown RBP12.54□□□□□ -0.4
SOD2-216ENST00000546260 CWC15Q9P013 229 aaKnown RBP12.54□□□□□ -0.4
SOD2-216ENST00000546260 C10orf67Q8IYJ2 551 aa12.54□□□□□ -0.4
SOD2-216ENST00000546260 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
SOD2-216ENST00000546260 SRPK2P78362 688 aaKnown RBP12.53□□□□□ -0.4
SOD2-216ENST00000546260 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
SOD2-216ENST00000546260 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
SOD2-216ENST00000546260 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
SOD2-216ENST00000546260 RABEP1Q15276 862 aa12.53□□□□□ -0.4
SOD2-216ENST00000546260 CFAP53Q96M91 514 aa12.53□□□□□ -0.4
SOD2-216ENST00000546260 PTPRKQ15262 1439 aa12.52□□□□□ -0.4
SOD2-216ENST00000546260 SNX21Q969T3 373 aa12.52□□□□□ -0.4
SOD2-216ENST00000546260 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.4
SOD2-216ENST00000546260 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
SOD2-216ENST00000546260 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
SOD2-216ENST00000546260 PLEKHH1Q9ULM0 1364 aa12.52□□□□□ -0.41
SOD2-216ENST00000546260 TPM3P06753 285 aa12.52□□□□□ -0.41
SOD2-216ENST00000546260 GORABQ5T7V8 394 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 DEF6Q9H4E7 631 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
SOD2-216ENST00000546260 MCCP23508 829 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
SOD2-216ENST00000546260 MYOM3Q5VTT5 1437 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 NRDCO43847 1150 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 CFDP1Q9UEE9 299 aaPredicted RBP12.51□□□□□ -0.41
SOD2-216ENST00000546260 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 MVPQ14764 893 aaKnown RBP12.51□□□□□ -0.41
SOD2-216ENST00000546260 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
SOD2-216ENST00000546260 CDC45O75419 566 aa12.5□□□□□ -0.41
SOD2-216ENST00000546260 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
SOD2-216ENST00000546260 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
SOD2-216ENST00000546260 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.412e-8■□□□□ 9
SOD2-216ENST00000546260 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
SOD2-216ENST00000546260 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
SOD2-216ENST00000546260 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
SOD2-216ENST00000546260 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
SOD2-216ENST00000546260 RASSF4Q9H2L5 321 aa12.5□□□□□ -0.41
SOD2-216ENST00000546260 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
SOD2-216ENST00000546260 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
SOD2-216ENST00000546260 NUP155O75694 1391 aa12.49□□□□□ -0.41
SOD2-216ENST00000546260 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
SOD2-216ENST00000546260 ANKRD30AQ9BXX3 1397 aa12.49□□□□□ -0.41
SOD2-216ENST00000546260 CHAMP1Q96JM3 812 aa12.49□□□□□ -0.41
SOD2-216ENST00000546260 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
SOD2-216ENST00000546260 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 CCAR2Q8N163 923 aaKnown RBP12.48□□□□□ -0.41
SOD2-216ENST00000546260 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.48□□□□□ -0.417e-6■■■□□ 16.5
SOD2-216ENST00000546260 FIBPO43427 364 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 NEK4P51957 841 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 ZRSR1Q15695 479 aaKnown RBP12.48□□□□□ -0.41
SOD2-216ENST00000546260 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 ARGLU1Q9NWB6 273 aaPredicted RBP12.48□□□□□ -0.41
SOD2-216ENST00000546260 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 RLBP1P12271 317 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 PLEKHH2Q8IVE3 1493 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 RARSP54136 660 aaKnown RBP12.48□□□□□ -0.41
SOD2-216ENST00000546260 CCDC27Q2M243 656 aa12.48□□□□□ -0.41
SOD2-216ENST00000546260 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
SOD2-216ENST00000546260 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
SOD2-216ENST00000546260 NINLQ9Y2I6 1382 aa12.47□□□□□ -0.41
SOD2-216ENST00000546260 CLGNO14967 610 aa12.46□□□□□ -0.41
SOD2-216ENST00000546260 TPM4P67936 248 aa12.46□□□□□ -0.41
SOD2-216ENST00000546260 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
SOD2-216ENST00000546260 HOMER1Q86YM7 354 aa12.46□□□□□ -0.41
SOD2-216ENST00000546260 ZGPATQ8N5A5 531 aaKnown RBP12.46□□□□□ -0.42
SOD2-216ENST00000546260 MNS1Q8NEH6 495 aa12.46□□□□□ -0.42
SOD2-216ENST00000546260 CFTRP13569 1480 aa12.45□□□□□ -0.42
SOD2-216ENST00000546260 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
SOD2-216ENST00000546260 PDLIM2Q96JY6 352 aa12.45□□□□□ -0.42
SOD2-216ENST00000546260 LEKR1Q6ZMV7 388 aa12.45□□□□□ -0.42
SOD2-216ENST00000546260 PKP1Q13835 747 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms