RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 POTECB2RU33 542 aa8.45□□□□□ -1.06
SNHG1-222ENST00000545308 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
SNHG1-222ENST00000545308 TOR4AQ9NXH8 423 aa8.45□□□□□ -1.06
SNHG1-222ENST00000545308 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
SNHG1-222ENST00000545308 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-222ENST00000545308 ST8SIA5O15466 376 aa8.44□□□□□ -1.06
SNHG1-222ENST00000545308 KDM4AO75164 1064 aa8.44□□□□□ -1.06
SNHG1-222ENST00000545308 ZBTB24O43167 697 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-222ENST00000545308 MMP16P51512 607 aa8.43□□□□□ -1.06
SNHG1-222ENST00000545308 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-222ENST00000545308 GTF3C3Q9Y5Q9 886 aa8.43□□□□□ -1.06
SNHG1-222ENST00000545308 CYP4X1Q8N118 509 aa8.42□□□□□ -1.06
SNHG1-222ENST00000545308 CRIPAKQ8N1N5 446 aa8.42□□□□□ -1.06
SNHG1-222ENST00000545308 AVPP01185 164 aa8.41□□□□□ -1.06
SNHG1-222ENST00000545308 USP46P62068 366 aa8.41□□□□□ -1.06
SNHG1-222ENST00000545308 USB1Q9BQ65 265 aaKnown RBP8.41□□□□□ -1.06
SNHG1-222ENST00000545308 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
SNHG1-222ENST00000545308 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
SNHG1-222ENST00000545308 TMEM132AQ24JP5 1023 aa8.39□□□□□ -1.07
SNHG1-222ENST00000545308 HLA-CQ95604 372 aa8.39□□□□□ -1.07
SNHG1-222ENST00000545308 WNT7AO00755 349 aa8.38□□□□□ -1.07
SNHG1-222ENST00000545308 TRIM32Q13049 653 aa8.38□□□□□ -1.07
SNHG1-222ENST00000545308 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
SNHG1-222ENST00000545308 TTC24A2A3L6 582 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-222ENST00000545308 AXIN1O15169 862 aa8.37□□□□□ -1.07
SNHG1-222ENST00000545308 HOXA2O43364 376 aa8.37□□□□□ -1.07
SNHG1-222ENST00000545308 CLCN1P35523 988 aa8.37□□□□□ -1.07
SNHG1-222ENST00000545308 CTC1Q2NKJ3 1217 aa8.37□□□□□ -1.07
SNHG1-222ENST00000545308 FAM217BQ9NTX9 383 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-222ENST00000545308 DACH1Q9UI36 760 aa8.37□□□□□ -1.07
SNHG1-222ENST00000545308 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-222ENST00000545308 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
SNHG1-222ENST00000545308 GUCA2AQ02747 115 aa8.34□□□□□ -1.07
SNHG1-222ENST00000545308 CCDC24Q8N4L8 307 aa8.34□□□□□ -1.07
SNHG1-222ENST00000545308 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
SNHG1-222ENST00000545308 SMPD1P17405 629 aa8.33□□□□□ -1.08
SNHG1-222ENST00000545308 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
SNHG1-222ENST00000545308 JUNDP17535 347 aa8.32□□□□□ -1.08
SNHG1-222ENST00000545308 BRPF1P55201 1214 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-222ENST00000545308 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
SNHG1-222ENST00000545308 KRI1Q8N9T8 703 aaKnown RBP8.32□□□□□ -1.08
SNHG1-222ENST00000545308 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
SNHG1-222ENST00000545308 REPIN1Q9BWE0 567 aaKnown RBP8.32□□□□□ -1.08
SNHG1-222ENST00000545308 GMPR2Q9P2T1 348 aaKnown RBP8.32□□□□□ -1.08
SNHG1-222ENST00000545308 J3QL48 77 aa8.3□□□□□ -1.08
SNHG1-222ENST00000545308 WNT7BP56706 349 aa8.3□□□□□ -1.08
SNHG1-222ENST00000545308 SKOR1P84550 965 aa8.3□□□□□ -1.08
SNHG1-222ENST00000545308 TREML4Q6UXN2 200 aa8.3□□□□□ -1.08
SNHG1-222ENST00000545308 RETREG3Q86VR2 466 aa8.3□□□□□ -1.08
SNHG1-222ENST00000545308 C11orf95C9JLR9 678 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-222ENST00000545308 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-222ENST00000545308 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
SNHG1-222ENST00000545308 FDX1P10109 184 aa8.28□□□□□ -1.08
SNHG1-222ENST00000545308 SSTR3P32745 418 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-222ENST00000545308 NUDT12Q9BQG2 462 aa8.27□□□□□ -1.09
SNHG1-222ENST00000545308 PCDHGC3Q9UN70 934 aa8.27□□□□□ -1.09
SNHG1-222ENST00000545308 HPS1Q92902 700 aa8.26□□□□□ -1.09
SNHG1-222ENST00000545308 SLC24A3Q9HC58 644 aa8.26□□□□□ -1.09
SNHG1-222ENST00000545308 ATP13A2Q9NQ11 1180 aa8.26□□□□□ -1.09
SNHG1-222ENST00000545308 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
SNHG1-222ENST00000545308 PTCRAQ6ISU1 281 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-222ENST00000545308 BARGINQ6ZT62 677 aa8.25□□□□□ -1.09
SNHG1-222ENST00000545308 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
SNHG1-222ENST00000545308 ZMYND10O75800 440 aa8.24□□□□□ -1.09
SNHG1-222ENST00000545308 TTLL12Q14166 644 aaPredicted RBP8.23□□□□□ -1.09
SNHG1-222ENST00000545308 AMHR2Q16671 573 aa8.23□□□□□ -1.09
SNHG1-222ENST00000545308 SIAH2O43255 324 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 WFS1O76024 890 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 MS4A1P11836 297 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 NDUFV2P19404 249 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 ERICH6Q7L0X2 663 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
SNHG1-222ENST00000545308 MOXD2PA6NHM9 499 aa8.21□□□□□ -1.1
SNHG1-222ENST00000545308 ALDH1A1P00352 501 aa8.21□□□□□ -1.1
SNHG1-222ENST00000545308 PTPRNQ16849 979 aa8.21□□□□□ -1.1
SNHG1-222ENST00000545308 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
SNHG1-222ENST00000545308 TRIM47Q96LD4 638 aa8.21□□□□□ -1.1
SNHG1-222ENST00000545308 SNRPBP14678 240 aaKnown RBP8.2□□□□□ -1.1
SNHG1-222ENST00000545308 NFX1Q12986 1120 aaKnown RBP8.2□□□□□ -1.1
SNHG1-222ENST00000545308 SH3BP2P78314 561 aa8.19□□□□□ -1.1
SNHG1-222ENST00000545308 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
SNHG1-222ENST00000545308 EVA1BQ9NVM1 165 aa8.19□□□□□ -1.1
SNHG1-222ENST00000545308 SPDYE5A6NIY4 337 aa8.18□□□□□ -1.1
SNHG1-222ENST00000545308 MTMR2Q13614 643 aa8.18□□□□□ -1.1
SNHG1-222ENST00000545308 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
SNHG1-222ENST00000545308 PRR7Q8TB68 274 aa8.18□□□□□ -1.1
SNHG1-222ENST00000545308 KIFC2Q96AC6 838 aa8.18□□□□□ -1.1
SNHG1-222ENST00000545308 BEGAINQ9BUH8 593 aa8.18□□□□□ -1.1
SNHG1-222ENST00000545308 UNC93B1Q9H1C4 597 aa8.18□□□□□ -1.1
SNHG1-222ENST00000545308 DESI1Q6ICB0 168 aa8.17□□□□□ -1.1
SNHG1-222ENST00000545308 KCNH2Q12809 1159 aa8.16□□□□□ -1.1
SNHG1-222ENST00000545308 WASF2Q9Y6W5 498 aa8.16□□□□□ -1.1
SNHG1-222ENST00000545308 GJA5P36382 358 aa8.15□□□□□ -1.1
SNHG1-222ENST00000545308 BAP1Q92560 729 aa8.15□□□□□ -1.1
SNHG1-222ENST00000545308 TERTO14746 1132 aaKnown RBP8.14□□□□□ -1.11
SNHG1-222ENST00000545308 WIPF1O43516 503 aa8.14□□□□□ -1.11
SNHG1-222ENST00000545308 DIXDC1Q155Q3 683 aa8.14□□□□□ -1.11
SNHG1-222ENST00000545308 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms