RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 IFIT2P09913 472 aaKnown RBP10.94□□□□□ -0.66
TSC1-208ENST00000545250 CCDC181Q5TID7 509 aa10.94□□□□□ -0.66
TSC1-208ENST00000545250 MIER1Q8N108 512 aa10.94□□□□□ -0.66
TSC1-208ENST00000545250 DRC1Q96MC2 740 aa10.94□□□□□ -0.66
TSC1-208ENST00000545250 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.94□□□□□ -0.66
TSC1-208ENST00000545250 V9GYY5 206 aaPredicted RBP10.94□□□□□ -0.66
TSC1-208ENST00000545250 JAKMIP3Q5VZ66 844 aa10.94□□□□□ -0.66
TSC1-208ENST00000545250 GTPBP4Q9BZE4 634 aaKnown RBP10.93□□□□□ -0.66
TSC1-208ENST00000545250 TAX1BP1Q86VP1 789 aa10.93□□□□□ -0.66
TSC1-208ENST00000545250 MATR3P43243 847 aaKnown RBP eCLIP10.93□□□□□ -0.663e-6■■□□□ 12.8
TSC1-208ENST00000545250 PHLDB1Q86UU1 1377 aa10.93□□□□□ -0.66
TSC1-208ENST00000545250 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 FERP16591 822 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 DCAF11Q8TEB1 546 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 COMMD10Q9Y6G5 202 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 SENP3-EIF4A1A0A087X0R7 540 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 TEFQ10587 303 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
TSC1-208ENST00000545250 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
TSC1-208ENST00000545250 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
TSC1-208ENST00000545250 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
TSC1-208ENST00000545250 ZCCHC6Q5VYS8 1495 aaKnown RBP10.91□□□□□ -0.66
TSC1-208ENST00000545250 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.66
TSC1-208ENST00000545250 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
TSC1-208ENST00000545250 ERC2O15083 957 aa10.9□□□□□ -0.67
TSC1-208ENST00000545250 DACH1Q9UI36 760 aa10.9□□□□□ -0.67
TSC1-208ENST00000545250 G3BP1Q13283 466 aaKnown RBP eCLIP10.9□□□□□ -0.67
TSC1-208ENST00000545250 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
TSC1-208ENST00000545250 LRRC45Q96CN5 670 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 PPP4R3AQ6IN85 833 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 CCNB3Q8WWL7 1395 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 CBX1P83916 185 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 NINLQ9Y2I6 1382 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 SYTL4Q96C24 671 aaPredicted RBP10.89□□□□□ -0.67
TSC1-208ENST00000545250 SMC3Q9UQE7 1217 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 TTLL5Q6EMB2 1281 aa10.89□□□□□ -0.67
TSC1-208ENST00000545250 VGFO15240 615 aaPredicted RBP10.88□□□□□ -0.67
TSC1-208ENST00000545250 MAP2K1Q02750 393 aaPredicted RBP10.88□□□□□ -0.67
TSC1-208ENST00000545250 WDR70Q9NW82 654 aa10.88□□□□□ -0.67
TSC1-208ENST00000545250 FERMT1Q9BQL6 677 aa10.88□□□□□ -0.67
TSC1-208ENST00000545250 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
TSC1-208ENST00000545250 CCDC150Q8NCX0 1101 aa10.88□□□□□ -0.67
TSC1-208ENST00000545250 PSMA5P28066 241 aa10.87□□□□□ -0.67
TSC1-208ENST00000545250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
TSC1-208ENST00000545250 SMC2O95347 1197 aa10.87□□□□□ -0.67
TSC1-208ENST00000545250 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
TSC1-208ENST00000545250 NOP2P46087 812 aaKnown RBP10.87□□□□□ -0.67
TSC1-208ENST00000545250 FYB1O15117 783 aa10.86□□□□□ -0.67
TSC1-208ENST00000545250 MRPS9P82933 396 aaKnown RBP10.86□□□□□ -0.67
TSC1-208ENST00000545250 SREK1Q8WXA9 508 aaKnown RBP10.86□□□□□ -0.67
TSC1-208ENST00000545250 PPP1R12BO60237 982 aaPredicted RBP10.86□□□□□ -0.67
TSC1-208ENST00000545250 RAB3IL1Q8TBN0 382 aa10.86□□□□□ -0.67
TSC1-208ENST00000545250 TSNARE1Q96NA8 513 aa10.86□□□□□ -0.67
TSC1-208ENST00000545250 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
TSC1-208ENST00000545250 SDF4Q9BRK5 362 aa10.86□□□□□ -0.67
TSC1-208ENST00000545250 TNIP1Q15025 636 aa10.86□□□□□ -0.67
TSC1-208ENST00000545250 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
TSC1-208ENST00000545250 FAM13BQ9NYF5 915 aa10.86□□□□□ -0.67
TSC1-208ENST00000545250 SOGA3Q5TF21 947 aa10.85□□□□□ -0.67
TSC1-208ENST00000545250 CENPHQ9H3R5 247 aa10.85□□□□□ -0.67
TSC1-208ENST00000545250 GNL3LQ9NVN8 582 aaKnown RBP10.85□□□□□ -0.67
TSC1-208ENST00000545250 CAVIN1Q6NZI2 390 aaKnown RBP10.85□□□□□ -0.67
TSC1-208ENST00000545250 CCDC39Q9UFE4 941 aa10.85□□□□□ -0.67
TSC1-208ENST00000545250 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.85□□□□□ -0.67
TSC1-208ENST00000545250 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
TSC1-208ENST00000545250 JMYQ8N9B5 988 aa10.85□□□□□ -0.67
TSC1-208ENST00000545250 HOOK3Q86VS8 718 aa10.85□□□□□ -0.67
TSC1-208ENST00000545250 FOXD4L6Q3SYB3 417 aaPredicted RBP10.84□□□□□ -0.67
TSC1-208ENST00000545250 FOXD4L3Q6VB84 417 aaPredicted RBP10.84□□□□□ -0.67
TSC1-208ENST00000545250 TIGD1Q96MW7 591 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 KINO60870 393 aaKnown RBP10.84□□□□□ -0.67
TSC1-208ENST00000545250 PIBF1Q8WXW3 757 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 PPFIBP1Q86W92 1011 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
TSC1-208ENST00000545250 NUCB2P80303 420 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 VPS37CA5D8V6 355 aaPredicted RBP10.84□□□□□ -0.67
TSC1-208ENST00000545250 GCOM1H8Y6P7 765 aaPredicted RBP10.84□□□□□ -0.67
TSC1-208ENST00000545250 MYZAPP0CAP1 466 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 ANKRD45Q5TZF3 282 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 DAAM2Q86T65 1068 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 LRRCC1Q9C099 1032 aa10.84□□□□□ -0.67
TSC1-208ENST00000545250 SSR1P43307 286 aaKnown RBP10.83□□□□□ -0.68
TSC1-208ENST00000545250 NASPP49321 788 aaPredicted RBP10.83□□□□□ -0.68
TSC1-208ENST00000545250 TANGO6Q9C0B7 1094 aa10.83□□□□□ -0.68
TSC1-208ENST00000545250 RGS22Q8NE09 1264 aa10.83□□□□□ -0.68
TSC1-208ENST00000545250 TRIM5Q9C035 493 aa10.83□□□□□ -0.68
TSC1-208ENST00000545250 DCAF1Q9Y4B6 1507 aa10.83□□□□□ -0.68
TSC1-208ENST00000545250 GGT6Q6P531 493 aa10.83□□□□□ -0.68
TSC1-208ENST00000545250 ZNF396Q96N95 335 aaPredicted RBP10.83□□□□□ -0.68
TSC1-208ENST00000545250 CFAP45Q9UL16 551 aa10.82□□□□□ -0.68
TSC1-208ENST00000545250 WASHC4Q2M389 1173 aa10.82□□□□□ -0.68
TSC1-208ENST00000545250 SEPT10Q9P0V9 454 aa10.82□□□□□ -0.68
TSC1-208ENST00000545250 C6orf163Q5TEZ5 329 aa10.82□□□□□ -0.68
TSC1-208ENST00000545250 TAF4BQ92750 862 aa10.82□□□□□ -0.68
TSC1-208ENST00000545250 NGEFQ8N5V2 710 aa10.82□□□□□ -0.68
TSC1-208ENST00000545250 CEP162Q5TB80 1403 aa10.81□□□□□ -0.68
TSC1-208ENST00000545250 PPP1R9BQ96SB3 815 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms