RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 KMT5BQ4FZB7 885 aa12.23□□□□□ -0.45
LEMD3-206ENST00000545026 ACTN4O43707 911 aaKnown RBP12.21□□□□□ -0.45
LEMD3-206ENST00000545026 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
LEMD3-206ENST00000545026 GDPD2Q9HCC8 539 aa12.21□□□□□ -0.45
LEMD3-206ENST00000545026 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.45
LEMD3-206ENST00000545026 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
LEMD3-206ENST00000545026 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
LEMD3-206ENST00000545026 MORN1Q5T089 497 aa12.2□□□□□ -0.46
LEMD3-206ENST00000545026 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
LEMD3-206ENST00000545026 ARID3AQ99856 593 aa12.2□□□□□ -0.46
LEMD3-206ENST00000545026 CFAP99D6REC4 459 aa12.19□□□□□ -0.46
LEMD3-206ENST00000545026 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
LEMD3-206ENST00000545026 ANKK1Q8NFD2 765 aa12.18□□□□□ -0.46
LEMD3-206ENST00000545026 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-206ENST00000545026 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
LEMD3-206ENST00000545026 PUS10Q3MIT2 529 aaKnown RBP12.17□□□□□ -0.46
LEMD3-206ENST00000545026 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
LEMD3-206ENST00000545026 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
LEMD3-206ENST00000545026 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
LEMD3-206ENST00000545026 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
LEMD3-206ENST00000545026 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
LEMD3-206ENST00000545026 HMX1Q9NP08 348 aaPredicted RBP12.16□□□□□ -0.46
LEMD3-206ENST00000545026 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
LEMD3-206ENST00000545026 SLC27A5Q9Y2P5 690 aa12.16□□□□□ -0.46
LEMD3-206ENST00000545026 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
LEMD3-206ENST00000545026 PRM3Q9NNZ6 103 aa12.15□□□□□ -0.46
LEMD3-206ENST00000545026 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
LEMD3-206ENST00000545026 ABL2P42684 1182 aa12.14□□□□□ -0.47
LEMD3-206ENST00000545026 BCAMP50895 628 aa12.14□□□□□ -0.47
LEMD3-206ENST00000545026 PPP4CP60510 307 aa12.14□□□□□ -0.47
LEMD3-206ENST00000545026 PRR7Q8TB68 274 aa12.14□□□□□ -0.47
LEMD3-206ENST00000545026 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
LEMD3-206ENST00000545026 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
LEMD3-206ENST00000545026 LRRN4Q8WUT4 740 aa12.13□□□□□ -0.47
LEMD3-206ENST00000545026 TSC1Q92574 1164 aa12.13□□□□□ -0.47
LEMD3-206ENST00000545026 APLP1P51693 650 aa12.12□□□□□ -0.47
LEMD3-206ENST00000545026 Q3C1V9 767 aa12.12□□□□□ -0.47
LEMD3-206ENST00000545026 RETREG3Q86VR2 466 aa12.12□□□□□ -0.47
LEMD3-206ENST00000545026 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
LEMD3-206ENST00000545026 WNT2BQ93097 391 aa12.11□□□□□ -0.47
LEMD3-206ENST00000545026 NDUFB9Q9Y6M9 179 aa12.11□□□□□ -0.47
LEMD3-206ENST00000545026 GPR37L1O60883 481 aa12.09□□□□□ -0.47
LEMD3-206ENST00000545026 WWC1Q8IX03 1113 aa12.09□□□□□ -0.47
LEMD3-206ENST00000545026 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
LEMD3-206ENST00000545026 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
LEMD3-206ENST00000545026 IRF5Q13568 498 aa12.08□□□□□ -0.48
LEMD3-206ENST00000545026 DESI1Q6ICB0 168 aa12.08□□□□□ -0.48
LEMD3-206ENST00000545026 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.48
LEMD3-206ENST00000545026 RNF19BQ6ZMZ0 732 aa12.08□□□□□ -0.48
LEMD3-206ENST00000545026 SALL2Q9Y467 1007 aaPredicted RBP12.08□□□□□ -0.48
LEMD3-206ENST00000545026 PER1O15534 1290 aaPredicted RBP12.07□□□□□ -0.48
LEMD3-206ENST00000545026 BRICD5Q6PL45 260 aa12.07□□□□□ -0.48
LEMD3-206ENST00000545026 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
LEMD3-206ENST00000545026 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
LEMD3-206ENST00000545026 PCDHB3Q9Y5E6 796 aa12.06□□□□□ -0.48
LEMD3-206ENST00000545026 POM121CA8CG34 1229 aa12.05□□□□□ -0.48
LEMD3-206ENST00000545026 THAP11Q96EK4 314 aa12.05□□□□□ -0.48
LEMD3-206ENST00000545026 USB1Q9BQ65 265 aaKnown RBP12.05□□□□□ -0.48
LEMD3-206ENST00000545026 WBP1LQ9NX94 342 aa12.05□□□□□ -0.48
LEMD3-206ENST00000545026 SERPINA10Q9UK55 444 aa12.05□□□□□ -0.48
LEMD3-206ENST00000545026 NR1I2O75469 434 aa12.03□□□□□ -0.48
LEMD3-206ENST00000545026 NR6A1Q15406 480 aa12.03□□□□□ -0.48
LEMD3-206ENST00000545026 LYPD8Q6UX82 237 aa12.03□□□□□ -0.48
LEMD3-206ENST00000545026 CCDC97Q96F63 343 aaPredicted RBP12.03□□□□□ -0.48
LEMD3-206ENST00000545026 THSD4Q6ZMP0 1018 aa12.01□□□□□ -0.49
LEMD3-206ENST00000545026 FMNL1O95466 1100 aaPredicted RBP12□□□□□ -0.49
LEMD3-206ENST00000545026 WASHC4Q2M389 1173 aa12□□□□□ -0.49
LEMD3-206ENST00000545026 GLMNQ92990 594 aa11.99□□□□□ -0.49
LEMD3-206ENST00000545026 CALR3Q96L12 384 aaKnown RBP11.99□□□□□ -0.49
LEMD3-206ENST00000545026 ADAMTS19Q8TE59 1207 aa11.97□□□□□ -0.49
LEMD3-206ENST00000545026 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
LEMD3-206ENST00000545026 JUNDP17535 347 aa11.95□□□□□ -0.5
LEMD3-206ENST00000545026 VAC14Q08AM6 782 aa11.95□□□□□ -0.5
LEMD3-206ENST00000545026 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
LEMD3-206ENST00000545026 POTEMA6NI47 508 aa11.93□□□□□ -0.5
LEMD3-206ENST00000545026 F12P00748 615 aaPredicted RBP11.93□□□□□ -0.5
LEMD3-206ENST00000545026 COPS2P61201 443 aa11.93□□□□□ -0.5
LEMD3-206ENST00000545026 PTPRNQ16849 979 aa11.93□□□□□ -0.5
LEMD3-206ENST00000545026 MSS51Q4VC12 460 aa11.93□□□□□ -0.5
LEMD3-206ENST00000545026 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
LEMD3-206ENST00000545026 NYAP1Q6ZVC0 841 aa11.92□□□□□ -0.5
LEMD3-206ENST00000545026 SPSB2Q99619 263 aa11.92□□□□□ -0.5
LEMD3-206ENST00000545026 ALG2Q9H553 416 aa11.91□□□□□ -0.5
LEMD3-206ENST00000545026 DXOO77932 396 aaKnown RBP11.9□□□□□ -0.5
LEMD3-206ENST00000545026 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
LEMD3-206ENST00000545026 MAP10Q9P2G4 905 aa11.9□□□□□ -0.5
LEMD3-206ENST00000545026 MMP16P51512 607 aa11.88□□□□□ -0.51
LEMD3-206ENST00000545026 FKBPLQ9UIM3 349 aa11.88□□□□□ -0.51
LEMD3-206ENST00000545026 ZPR1O75312 459 aa11.87□□□□□ -0.51
LEMD3-206ENST00000545026 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
LEMD3-206ENST00000545026 MTRQ99707 1265 aa11.87□□□□□ -0.51
LEMD3-206ENST00000545026 PRDM9Q9NQV7 894 aa11.87□□□□□ -0.51
LEMD3-206ENST00000545026 TLL1O43897 1013 aa11.86□□□□□ -0.51
LEMD3-206ENST00000545026 SOX11P35716 441 aa11.86□□□□□ -0.51
LEMD3-206ENST00000545026 EVA1BQ9NVM1 165 aa11.86□□□□□ -0.51
LEMD3-206ENST00000545026 ADH1BP00325 375 aa11.85□□□□□ -0.51
LEMD3-206ENST00000545026 CCNYL3P0C7X3 344 aa11.85□□□□□ -0.51
LEMD3-206ENST00000545026 POTEGQ6S5H5 508 aa11.85□□□□□ -0.51
LEMD3-206ENST00000545026 FBXO45P0C2W1 286 aa11.84□□□□□ -0.51
LEMD3-206ENST00000545026 CTHP32929 405 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms