RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 KANK1Q14678 1352 aa24.72■■□□□ 1.55
LYSMD4-210ENST00000545021 PANK2Q9BZ23 570 aa24.72■■□□□ 1.55
LYSMD4-210ENST00000545021 KDM5AP29375 1690 aaKnown RBP24.72■■□□□ 1.55
LYSMD4-210ENST00000545021 BLMP54132 1417 aaPredicted RBP24.71■■□□□ 1.55
LYSMD4-210ENST00000545021 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
LYSMD4-210ENST00000545021 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
LYSMD4-210ENST00000545021 TET3O43151 1660 aa24.69■■□□□ 1.54
LYSMD4-210ENST00000545021 ESPNB1AK53 854 aa24.69■■□□□ 1.54
LYSMD4-210ENST00000545021 MRE11P49959 708 aa24.69■■□□□ 1.54
LYSMD4-210ENST00000545021 PARD3Q8TEW0 1356 aa24.67■■□□□ 1.54
LYSMD4-210ENST00000545021 IQGAP3Q86VI3 1631 aa24.67■■□□□ 1.54
LYSMD4-210ENST00000545021 SLKQ9H2G2 1235 aaPredicted RBP24.67■■□□□ 1.54
LYSMD4-210ENST00000545021 RGS3P49796 1198 aa24.66■■□□□ 1.54
LYSMD4-210ENST00000545021 PRDM4Q9UKN5 801 aa24.66■■□□□ 1.54
LYSMD4-210ENST00000545021 DMRT2Q9Y5R5 561 aa24.66■■□□□ 1.54
LYSMD4-210ENST00000545021 RBM10P98175 930 aaKnown RBP24.63■■□□□ 1.53
LYSMD4-210ENST00000545021 ARXQ96QS3 562 aa24.63■■□□□ 1.53
LYSMD4-210ENST00000545021 HSPA2P54652 639 aa24.62■■□□□ 1.53
LYSMD4-210ENST00000545021 PLPPR3Q6T4P5 718 aa24.62■■□□□ 1.53
LYSMD4-210ENST00000545021 ISY1Q9ULR0 285 aaKnown RBP24.62■■□□□ 1.53
LYSMD4-210ENST00000545021 RALGAPBQ86X10 1494 aa24.62■■□□□ 1.53
LYSMD4-210ENST00000545021 MYH16Q9H6N6 1097 aa24.61■■□□□ 1.53
LYSMD4-210ENST00000545021 SLC24A1O60721 1099 aa24.6■■□□□ 1.53
LYSMD4-210ENST00000545021 ERBB4Q15303 1308 aa24.6■■□□□ 1.53
LYSMD4-210ENST00000545021 MCM4P33991 863 aa24.6■■□□□ 1.53
LYSMD4-210ENST00000545021 PKD2Q13563 968 aa24.59■■□□□ 1.53
LYSMD4-210ENST00000545021 NOS1P29475 1434 aa24.59■■□□□ 1.53
LYSMD4-210ENST00000545021 UBR1Q8IWV7 1749 aa24.59■■□□□ 1.53
LYSMD4-210ENST00000545021 SLC4A1APQ9BWU0 796 aaKnown RBP24.59■■□□□ 1.53
LYSMD4-210ENST00000545021 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.58■■□□□ 1.53
LYSMD4-210ENST00000545021 AAMPQ13685 434 aa24.57■■□□□ 1.52
LYSMD4-210ENST00000545021 UGGT1Q9NYU2 1555 aa24.57■■□□□ 1.52
LYSMD4-210ENST00000545021 GRPEL1Q9HAV7 217 aa24.55■■□□□ 1.52
LYSMD4-210ENST00000545021 EIF3AQ14152 1382 aaKnown RBP24.55■■□□□ 1.52
LYSMD4-210ENST00000545021 MED14O60244 1454 aa24.54■■□□□ 1.52
LYSMD4-210ENST00000545021 SYNMO15061 1565 aa24.54■■□□□ 1.52
LYSMD4-210ENST00000545021 NEURL4Q96JN8 1562 aa24.54■■□□□ 1.52
LYSMD4-210ENST00000545021 FBXO31Q5XUX0 539 aaPredicted RBP24.54■■□□□ 1.52
LYSMD4-210ENST00000545021 IQSEC2Q5JU85 1478 aa24.53■■□□□ 1.52
LYSMD4-210ENST00000545021 GZF1Q9H116 711 aaPredicted RBP24.53■■□□□ 1.52
LYSMD4-210ENST00000545021 SLIT1O75093 1534 aa24.53■■□□□ 1.52
LYSMD4-210ENST00000545021 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
LYSMD4-210ENST00000545021 TRAK2O60296 914 aa24.52■■□□□ 1.52
LYSMD4-210ENST00000545021 PIK3C2BO00750 1634 aa24.52■■□□□ 1.52
LYSMD4-210ENST00000545021 MAPK8IP3Q9UPT6 1336 aa24.51■■□□□ 1.51
LYSMD4-210ENST00000545021 SEC24BO95487 1268 aa24.51■■□□□ 1.51
LYSMD4-210ENST00000545021 TRIM44Q96DX7 344 aaPredicted RBP24.51■■□□□ 1.51
LYSMD4-210ENST00000545021 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
LYSMD4-210ENST00000545021 TBC1D2Q9BYX2 928 aa24.49■■□□□ 1.51
LYSMD4-210ENST00000545021 MAP7D2Q96T17 732 aa24.49■■□□□ 1.51
LYSMD4-210ENST00000545021 ADGRB3O60242 1522 aa24.48■■□□□ 1.51
LYSMD4-210ENST00000545021 DUSP27Q5VZP5 1158 aa24.47■■□□□ 1.51
LYSMD4-210ENST00000545021 KIAA1211Q6ZU35 1233 aa24.47■■□□□ 1.51
LYSMD4-210ENST00000545021 THEMISQ8N1K5 641 aaPredicted RBP24.47■■□□□ 1.51
LYSMD4-210ENST00000545021 CARD11Q9BXL7 1154 aa24.47■■□□□ 1.51
LYSMD4-210ENST00000545021 A0A0U1RQG5 324 aaPredicted RBP24.47■■□□□ 1.51
LYSMD4-210ENST00000545021 TERF1P54274 439 aa24.47■■□□□ 1.51
LYSMD4-210ENST00000545021 LTBP4Q8N2S1 1624 aa24.47■■□□□ 1.51
LYSMD4-210ENST00000545021 TBC1D32Q96NH3 1257 aa24.45■■□□□ 1.5
LYSMD4-210ENST00000545021 FGD1P98174 961 aa24.44■■□□□ 1.5
LYSMD4-210ENST00000545021 ST20-MTHFSA0A0A6YYL1 179 aa24.44■■□□□ 1.5
LYSMD4-210ENST00000545021 UPF2Q9HAU5 1272 aaKnown RBP24.44■■□□□ 1.5
LYSMD4-210ENST00000545021 CHMP5Q9NZZ3 219 aa24.43■■□□□ 1.5
LYSMD4-210ENST00000545021 IQGAP1P46940 1657 aa24.43■■□□□ 1.5
LYSMD4-210ENST00000545021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.42■■□□□ 1.5
LYSMD4-210ENST00000545021 DDX11L8A8MPP1 907 aa24.42■■□□□ 1.5
LYSMD4-210ENST00000545021 PER1O15534 1290 aaPredicted RBP24.41■■□□□ 1.5
LYSMD4-210ENST00000545021 SLC52A1Q9NWF4 448 aa24.4■■□□□ 1.5
LYSMD4-210ENST00000545021 CFAP65Q6ZU64 1925 aaKnown RBP24.4■■□□□ 1.5
LYSMD4-210ENST00000545021 CCDC144AA2RUR9 1427 aa24.4■■□□□ 1.5
LYSMD4-210ENST00000545021 OFD1O75665 1012 aa24.39■■□□□ 1.5
LYSMD4-210ENST00000545021 SPHKAPQ2M3C7 1700 aa24.39■■□□□ 1.49
LYSMD4-210ENST00000545021 ZNF521Q96K83 1311 aa24.38■■□□□ 1.49
LYSMD4-210ENST00000545021 SMAP1Q8IYB5 467 aaPredicted RBP24.38■■□□□ 1.49
LYSMD4-210ENST00000545021 NPHP4O75161 1426 aaPredicted RBP24.38■■□□□ 1.49
LYSMD4-210ENST00000545021 IGHDP01880 384 aa24.37■■□□□ 1.49
LYSMD4-210ENST00000545021 NCKAP5LQ9HCH0 1330 aa24.37■■□□□ 1.49
LYSMD4-210ENST00000545021 RIPK4P57078 832 aa24.37■■□□□ 1.49
LYSMD4-210ENST00000545021 SCAF11Q99590 1463 aaKnown RBP24.37■■□□□ 1.49
LYSMD4-210ENST00000545021 PLEKHH1Q9ULM0 1364 aa24.37■■□□□ 1.49
LYSMD4-210ENST00000545021 ANKLE2Q86XL3 938 aa24.36■■□□□ 1.49
LYSMD4-210ENST00000545021 TMEM131LA2VDJ0 1609 aa24.36■■□□□ 1.49
LYSMD4-210ENST00000545021 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.36■■□□□ 1.49
LYSMD4-210ENST00000545021 NUP155O75694 1391 aa24.36■■□□□ 1.49
LYSMD4-210ENST00000545021 CPS1P31327 1500 aa24.36■■□□□ 1.49
LYSMD4-210ENST00000545021 GOLGA2Q08379 1002 aa24.34■■□□□ 1.49
LYSMD4-210ENST00000545021 TMEM2Q9UHN6 1383 aa24.33■■□□□ 1.49
LYSMD4-210ENST00000545021 ZSCAN30Q86W11 494 aa24.32■■□□□ 1.48
LYSMD4-210ENST00000545021 TRPM2O94759 1503 aa24.32■■□□□ 1.48
LYSMD4-210ENST00000545021 CERKQ8TCT0 537 aa24.32■■□□□ 1.48
LYSMD4-210ENST00000545021 CCDC173Q0VFZ6 552 aa24.31■■□□□ 1.48
LYSMD4-210ENST00000545021 FBXO41Q8TF61 875 aa24.31■■□□□ 1.48
LYSMD4-210ENST00000545021 CGNL1Q0VF96 1302 aa24.31■■□□□ 1.48
LYSMD4-210ENST00000545021 PPP1R9BQ96SB3 815 aa24.3■■□□□ 1.48
LYSMD4-210ENST00000545021 MTERF4Q7Z6M4 381 aaKnown RBP24.3■■□□□ 1.48
LYSMD4-210ENST00000545021 ADAMTS8Q9UP79 889 aa24.29■■□□□ 1.48
LYSMD4-210ENST00000545021 SLFN5Q08AF3 891 aa24.29■■□□□ 1.48
LYSMD4-210ENST00000545021 TRMT2AQ8IZ69 625 aaKnown RBP24.28■■□□□ 1.48
LYSMD4-210ENST00000545021 ZFYVE9O95405 1425 aa24.27■■□□□ 1.48
LYSMD4-210ENST00000545021 IDI1Q13907 227 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms