RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 ZNF521Q96K83 1311 aa23.9■■□□□ 1.42
TNFAIP1-202ENST00000544907 POLR3AO14802 1390 aaPredicted RBP23.9■■□□□ 1.42
TNFAIP1-202ENST00000544907 CEP170BQ9Y4F5 1589 aaPredicted RBP23.9■■□□□ 1.42
TNFAIP1-202ENST00000544907 TMEM131LA2VDJ0 1609 aa23.9■■□□□ 1.42
TNFAIP1-202ENST00000544907 NINLQ9Y2I6 1382 aa23.89■■□□□ 1.42
TNFAIP1-202ENST00000544907 TRAK1Q9UPV9 953 aa23.89■■□□□ 1.41
TNFAIP1-202ENST00000544907 FANCIQ9NVI1 1328 aa23.89■■□□□ 1.41
TNFAIP1-202ENST00000544907 CCDC136Q96JN2 1154 aa23.88■■□□□ 1.41
TNFAIP1-202ENST00000544907 ARHGEF28Q8N1W1 1705 aaKnown RBP23.88■■□□□ 1.41
TNFAIP1-202ENST00000544907 A2ML1A8K2U0 1454 aa23.87■■□□□ 1.41
TNFAIP1-202ENST00000544907 EVC2Q86UK5 1308 aa23.86■■□□□ 1.41
TNFAIP1-202ENST00000544907 NSD2O96028 1365 aa23.86■■□□□ 1.41
TNFAIP1-202ENST00000544907 CDCA7LQ96GN5 454 aa23.83■■□□□ 1.41
TNFAIP1-202ENST00000544907 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
TNFAIP1-202ENST00000544907 NSD3Q9BZ95 1437 aa23.83■■□□□ 1.41
TNFAIP1-202ENST00000544907 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.4
TNFAIP1-202ENST00000544907 TMEM132EQ6IEE7 984 aa23.82■■□□□ 1.4
TNFAIP1-202ENST00000544907 ANKRD36BQ8N2N9 1353 aa23.81■■□□□ 1.4
TNFAIP1-202ENST00000544907 PLEKHH1Q9ULM0 1364 aa23.81■■□□□ 1.4
TNFAIP1-202ENST00000544907 TULP4Q9NRJ4 1543 aa23.81■■□□□ 1.4
TNFAIP1-202ENST00000544907 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
TNFAIP1-202ENST00000544907 SALL2Q9Y467 1007 aaPredicted RBP23.8■■□□□ 1.4
TNFAIP1-202ENST00000544907 GOLGA2Q08379 1002 aa23.79■■□□□ 1.4
TNFAIP1-202ENST00000544907 CGNL1Q0VF96 1302 aa23.79■■□□□ 1.4
TNFAIP1-202ENST00000544907 MYO5BQ9ULV0 1848 aa23.78■■□□□ 1.4
TNFAIP1-202ENST00000544907 TRMT2AQ8IZ69 625 aaKnown RBP23.78■■□□□ 1.4
TNFAIP1-202ENST00000544907 SENP3-EIF4A1A0A087X0R7 540 aa23.77■■□□□ 1.4
TNFAIP1-202ENST00000544907 DUSP27Q5VZP5 1158 aa23.77■■□□□ 1.4
TNFAIP1-202ENST00000544907 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
TNFAIP1-202ENST00000544907 SLC12A5Q9H2X9 1139 aa23.76■■□□□ 1.39
TNFAIP1-202ENST00000544907 SLFN5Q08AF3 891 aa23.74■■□□□ 1.39
TNFAIP1-202ENST00000544907 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
TNFAIP1-202ENST00000544907 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
TNFAIP1-202ENST00000544907 THEMISQ8N1K5 641 aaPredicted RBP23.73■■□□□ 1.39
TNFAIP1-202ENST00000544907 YTHDC2Q9H6S0 1430 aaKnown RBP23.72■■□□□ 1.39
TNFAIP1-202ENST00000544907 EXOC6Q8TAG9 804 aa23.71■■□□□ 1.39
TNFAIP1-202ENST00000544907 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
TNFAIP1-202ENST00000544907 HSPA2P54652 639 aa23.7■■□□□ 1.39
TNFAIP1-202ENST00000544907 MED14O60244 1454 aa23.7■■□□□ 1.38
TNFAIP1-202ENST00000544907 ALKQ9UM73 1620 aa23.7■■□□□ 1.38
TNFAIP1-202ENST00000544907 E9PSI1 815 aa23.7■■□□□ 1.38
TNFAIP1-202ENST00000544907 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.69■■□□□ 1.38
TNFAIP1-202ENST00000544907 ABCC11Q96J66 1382 aa23.69■■□□□ 1.38
TNFAIP1-202ENST00000544907 SLIT1O75093 1534 aa23.69■■□□□ 1.38
TNFAIP1-202ENST00000544907 SHPRHQ149N8 1683 aa23.69■■□□□ 1.38
TNFAIP1-202ENST00000544907 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
TNFAIP1-202ENST00000544907 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
TNFAIP1-202ENST00000544907 CFAP53Q96M91 514 aa23.67■■□□□ 1.38
TNFAIP1-202ENST00000544907 ARHGAP23Q9P227 1491 aa23.66■■□□□ 1.38
TNFAIP1-202ENST00000544907 APAF1O14727 1248 aa23.66■■□□□ 1.38
TNFAIP1-202ENST00000544907 ANP32EQ9BTT0 268 aa23.66■■□□□ 1.38
TNFAIP1-202ENST00000544907 NUTM2DQ5VT03 806 aaPredicted RBP23.64■■□□□ 1.38
TNFAIP1-202ENST00000544907 RIMS2Q9UQ26 1411 aa23.63■■□□□ 1.37
TNFAIP1-202ENST00000544907 TCERG1O14776 1098 aaKnown RBP23.63■■□□□ 1.37
TNFAIP1-202ENST00000544907 IQSEC2Q5JU85 1478 aa23.62■■□□□ 1.37
TNFAIP1-202ENST00000544907 RUNDC1Q96C34 613 aa23.62■■□□□ 1.37
TNFAIP1-202ENST00000544907 TERF2IPQ9NYB0 399 aa23.62■■□□□ 1.37
TNFAIP1-202ENST00000544907 CCDC27Q2M243 656 aa23.61■■□□□ 1.37
TNFAIP1-202ENST00000544907 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
TNFAIP1-202ENST00000544907 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
TNFAIP1-202ENST00000544907 ANKLE2Q86XL3 938 aa23.6■■□□□ 1.37
TNFAIP1-202ENST00000544907 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
TNFAIP1-202ENST00000544907 A0A1W2PP64 1363 aa23.6■■□□□ 1.37
TNFAIP1-202ENST00000544907 MS4A1P11836 297 aa23.6■■□□□ 1.37
TNFAIP1-202ENST00000544907 HDGFP51858 240 aaKnown RBP23.6■■□□□ 1.37
TNFAIP1-202ENST00000544907 CABP2Q9NPB3 220 aa23.6■■□□□ 1.37
TNFAIP1-202ENST00000544907 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
TNFAIP1-202ENST00000544907 TXNDC2Q86VQ3 553 aa23.58■■□□□ 1.37
TNFAIP1-202ENST00000544907 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.58■■□□□ 1.37
TNFAIP1-202ENST00000544907 PRAM1Q96QH2 718 aa23.58■■□□□ 1.37
TNFAIP1-202ENST00000544907 MTHFSP49914 203 aa23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 CRBNQ96SW2 442 aa23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 POGKQ9P215 609 aa23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 SETD1AO15047 1707 aaKnown RBP23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 SRPK2P78362 688 aaKnown RBP23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 WDR63Q8IWG1 891 aa23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 WWC1Q8IX03 1113 aa23.57■■□□□ 1.36
TNFAIP1-202ENST00000544907 CD163L1Q9NR16 1453 aa23.56■■□□□ 1.36
TNFAIP1-202ENST00000544907 LTKP29376 864 aa23.56■■□□□ 1.36
TNFAIP1-202ENST00000544907 STK26Q9P289 416 aa23.55■■□□□ 1.36
TNFAIP1-202ENST00000544907 NCKAP5LQ9HCH0 1330 aa23.55■■□□□ 1.36
TNFAIP1-202ENST00000544907 PLIN1O60240 522 aa23.54■■□□□ 1.36
TNFAIP1-202ENST00000544907 SIRT1Q96EB6 747 aa23.54■■□□□ 1.36
TNFAIP1-202ENST00000544907 ATP7BP35670 1465 aa23.53■■□□□ 1.36
TNFAIP1-202ENST00000544907 HDGFL2Q7Z4V5 671 aaPredicted RBP23.52■■□□□ 1.36
TNFAIP1-202ENST00000544907 ADGRB2O60241 1585 aa23.51■■□□□ 1.35
TNFAIP1-202ENST00000544907 SPINK5Q9NQ38 1064 aaPredicted RBP23.51■■□□□ 1.35
TNFAIP1-202ENST00000544907 NPHP4O75161 1426 aaPredicted RBP23.51■■□□□ 1.35
TNFAIP1-202ENST00000544907 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
TNFAIP1-202ENST00000544907 MSH5O43196 834 aa23.5■■□□□ 1.35
TNFAIP1-202ENST00000544907 PDE3AQ14432 1141 aa23.49■■□□□ 1.35
TNFAIP1-202ENST00000544907 CENPQQ7L2Z9 268 aaPredicted RBP23.49■■□□□ 1.35
TNFAIP1-202ENST00000544907 TCP11L2Q8N4U5 519 aa23.49■■□□□ 1.35
TNFAIP1-202ENST00000544907 MINK1Q8N4C8 1332 aaPredicted RBP23.49■■□□□ 1.35
TNFAIP1-202ENST00000544907 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
TNFAIP1-202ENST00000544907 TECPR2O15040 1411 aa23.49■■□□□ 1.35
TNFAIP1-202ENST00000544907 COL3A1P02461 1466 aaPredicted RBP23.49■■□□□ 1.35
TNFAIP1-202ENST00000544907 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
TNFAIP1-202ENST00000544907 CDK19Q9BWU1 502 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms