RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SCAPERQ9BY12 1400 aa15.62■□□□□ 0.09
CHD4-211ENST00000544484 INTS3Q68E01 1043 aaKnown RBP15.62■□□□□ 0.09
CHD4-211ENST00000544484 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
CHD4-211ENST00000544484 VPS37CA5D8V6 355 aaPredicted RBP15.61■□□□□ 0.09
CHD4-211ENST00000544484 RRBP1Q9P2E9 1410 aaKnown RBP15.61■□□□□ 0.09
CHD4-211ENST00000544484 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
CHD4-211ENST00000544484 C22orf23Q9BZE7 217 aa15.6■□□□□ 0.09
CHD4-211ENST00000544484 TRDNQ13061 729 aa15.6■□□□□ 0.09
CHD4-211ENST00000544484 ZNF428Q96B54 188 aa15.6■□□□□ 0.09
CHD4-211ENST00000544484 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
CHD4-211ENST00000544484 RAPGEF3O95398 923 aa15.6■□□□□ 0.09
CHD4-211ENST00000544484 TRIM29Q14134 588 aa15.6■□□□□ 0.09
CHD4-211ENST00000544484 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
CHD4-211ENST00000544484 RNF20Q5VTR2 975 aa15.6■□□□□ 0.09
CHD4-211ENST00000544484 DHX16O60231 1041 aaKnown RBP15.59■□□□□ 0.09
CHD4-211ENST00000544484 C1orf115Q9H7X2 142 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 TPM3P06753 285 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 FAM177BA6PVY3 158 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 HSP90AB4PQ58FF6 505 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 AMOTL1Q8IY63 956 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 CHMP4CQ96CF2 233 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 CHMP5Q9NZZ3 219 aa15.59■□□□□ 0.09
CHD4-211ENST00000544484 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
CHD4-211ENST00000544484 NFXL1Q6ZNB6 911 aa15.58■□□□□ 0.09
CHD4-211ENST00000544484 ERC2O15083 957 aa15.58■□□□□ 0.08
CHD4-211ENST00000544484 BICD2Q8TD16 824 aa15.58■□□□□ 0.08
CHD4-211ENST00000544484 CDK19Q9BWU1 502 aa15.58■□□□□ 0.08
CHD4-211ENST00000544484 WASHC4Q2M389 1173 aa15.57■□□□□ 0.08
CHD4-211ENST00000544484 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
CHD4-211ENST00000544484 TRIM34Q9BYJ4 488 aa15.57■□□□□ 0.08
CHD4-211ENST00000544484 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
CHD4-211ENST00000544484 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
CHD4-211ENST00000544484 BCAR3O75815 825 aa15.56■□□□□ 0.08
CHD4-211ENST00000544484 GPRASP1Q5JY77 1395 aa15.56■□□□□ 0.08
CHD4-211ENST00000544484 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
CHD4-211ENST00000544484 TWISTNBQ3B726 338 aaPredicted RBP15.56■□□□□ 0.08
CHD4-211ENST00000544484 SULT6B1Q6IMI4 303 aa15.56■□□□□ 0.08
CHD4-211ENST00000544484 KIAA1107Q9UPP5 1409 aa15.56■□□□□ 0.08
CHD4-211ENST00000544484 FYB1O15117 783 aa15.56■□□□□ 0.08
CHD4-211ENST00000544484 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
CHD4-211ENST00000544484 STRN4Q9NRL3 753 aa15.55■□□□□ 0.08
CHD4-211ENST00000544484 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
CHD4-211ENST00000544484 CCDC30Q5VVM6 783 aa15.54■□□□□ 0.08
CHD4-211ENST00000544484 CCAR2Q8N163 923 aaKnown RBP15.54■□□□□ 0.08
CHD4-211ENST00000544484 HFM1A2PYH4 1435 aa15.54■□□□□ 0.08
CHD4-211ENST00000544484 CDC45O75419 566 aa15.54■□□□□ 0.08
CHD4-211ENST00000544484 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
CHD4-211ENST00000544484 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
CHD4-211ENST00000544484 CCDC184Q52MB2 194 aa15.53■□□□□ 0.08
CHD4-211ENST00000544484 NOB1Q9ULX3 412 aaKnown RBP15.53■□□□□ 0.08
CHD4-211ENST00000544484 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
CHD4-211ENST00000544484 KDM4AO75164 1064 aa15.53■□□□□ 0.08
CHD4-211ENST00000544484 CCDC27Q2M243 656 aa15.53■□□□□ 0.08
CHD4-211ENST00000544484 TSR1Q2NL82 804 aaKnown RBP15.53■□□□□ 0.08
CHD4-211ENST00000544484 CEP89Q96ST8 783 aa15.53■□□□□ 0.08
CHD4-211ENST00000544484 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
CHD4-211ENST00000544484 WWC1Q8IX03 1113 aa15.53■□□□□ 0.08
CHD4-211ENST00000544484 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
CHD4-211ENST00000544484 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
CHD4-211ENST00000544484 TROQ12816 1431 aaPredicted RBP15.53■□□□□ 0.08
CHD4-211ENST00000544484 RBM33Q96EV2 1170 aaKnown RBP15.52■□□□□ 0.08
CHD4-211ENST00000544484 PDZRN3Q9UPQ7 1066 aa15.52■□□□□ 0.08
CHD4-211ENST00000544484 PRXQ9BXM0 1461 aa15.52■□□□□ 0.08
CHD4-211ENST00000544484 CLASRPQ8N2M8 674 aaKnown RBP15.52■□□□□ 0.08
CHD4-211ENST00000544484 ERICH2A1L162 156 aa15.52■□□□□ 0.08
CHD4-211ENST00000544484 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
CHD4-211ENST00000544484 PLEKHO1Q53GL0 409 aaPredicted RBP15.52■□□□□ 0.07
CHD4-211ENST00000544484 RALYLQ86SE5 291 aaKnown RBP15.52■□□□□ 0.07
CHD4-211ENST00000544484 FSD1Q9BTV5 496 aa15.52■□□□□ 0.07
CHD4-211ENST00000544484 SLC4A2P04920 1241 aa15.52■□□□□ 0.07
CHD4-211ENST00000544484 GNAI3P08754 354 aa15.52■□□□□ 0.07
CHD4-211ENST00000544484 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.07
CHD4-211ENST00000544484 MTMR7Q9Y216 660 aa15.51■□□□□ 0.07
CHD4-211ENST00000544484 ZNF592Q92610 1267 aa15.51■□□□□ 0.07
CHD4-211ENST00000544484 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
CHD4-211ENST00000544484 DNAJC2Q99543 621 aaKnown RBP15.5■□□□□ 0.07
CHD4-211ENST00000544484 AKNAQ7Z591 1439 aa15.5■□□□□ 0.07
CHD4-211ENST00000544484 NUCB2P80303 420 aa15.5■□□□□ 0.07
CHD4-211ENST00000544484 RRS1Q15050 365 aaKnown RBP15.5■□□□□ 0.07
CHD4-211ENST00000544484 CTDP1Q9Y5B0 961 aaPredicted RBP15.5■□□□□ 0.07
CHD4-211ENST00000544484 HDGFL1Q5TGJ6 251 aa15.49■□□□□ 0.07
CHD4-211ENST00000544484 PNISRQ8TF01 805 aaKnown RBP15.49■□□□□ 0.07
CHD4-211ENST00000544484 PCMTD1Q96MG8 357 aaPredicted RBP15.49■□□□□ 0.07
CHD4-211ENST00000544484 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
CHD4-211ENST00000544484 AAMPQ13685 434 aa15.49■□□□□ 0.07
CHD4-211ENST00000544484 GOLGA6L1Q8N7Z2 621 aa15.49■□□□□ 0.07
CHD4-211ENST00000544484 TCEAL9Q9UHQ7 104 aa15.49■□□□□ 0.07
CHD4-211ENST00000544484 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
CHD4-211ENST00000544484 THEMISQ8N1K5 641 aaPredicted RBP15.49■□□□□ 0.07
CHD4-211ENST00000544484 TPM1P09493 284 aa15.48■□□□□ 0.07
CHD4-211ENST00000544484 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
CHD4-211ENST00000544484 SLC52A1Q9NWF4 448 aa15.48■□□□□ 0.07
CHD4-211ENST00000544484 DAPK1P53355 1430 aa15.47■□□□□ 0.07
CHD4-211ENST00000544484 ERBINQ96RT1 1412 aa15.47■□□□□ 0.07
CHD4-211ENST00000544484 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
CHD4-211ENST00000544484 DDX54Q8TDD1 881 aaKnown RBP15.47■□□□□ 0.07
CHD4-211ENST00000544484 TPM2P07951 284 aa15.47■□□□□ 0.07
CHD4-211ENST00000544484 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
CHD4-211ENST00000544484 NFKBIBQ15653 356 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms