RNA–Protein interactions for RNA: ENST00000543824.5

PHC1-212, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-212ENST00000543824 ATP6V1DQ9Y5K8 247 aa22.28■■□□□ 1.16
PHC1-212ENST00000543824 DHX29Q7Z478 1369 aaKnown RBP22.27■■□□□ 1.16
PHC1-212ENST00000543824 CHD1LQ86WJ1 897 aa22.27■■□□□ 1.16
PHC1-212ENST00000543824 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
PHC1-212ENST00000543824 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.16
PHC1-212ENST00000543824 SSFA2P28290 1259 aa22.26■■□□□ 1.15
PHC1-212ENST00000543824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.26■■□□□ 1.15
PHC1-212ENST00000543824 MBD3O95983 291 aa22.26■■□□□ 1.15
PHC1-212ENST00000543824 NKTRP30414 1462 aaKnown RBP22.25■■□□□ 1.15
PHC1-212ENST00000543824 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
PHC1-212ENST00000543824 ABCC5O15440 1437 aa22.25■■□□□ 1.15
PHC1-212ENST00000543824 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
PHC1-212ENST00000543824 PCDHB15Q9Y5E8 787 aa22.24■■□□□ 1.15
PHC1-212ENST00000543824 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
PHC1-212ENST00000543824 TSPY26PQ9H489 355 aa22.23■■□□□ 1.15
PHC1-212ENST00000543824 VPS37CA5D8V6 355 aaPredicted RBP22.23■■□□□ 1.15
PHC1-212ENST00000543824 TMEM57Q8N5G2 664 aa22.23■■□□□ 1.15
PHC1-212ENST00000543824 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
PHC1-212ENST00000543824 C9orf84Q5VXU9 1444 aa22.23■■□□□ 1.15
PHC1-212ENST00000543824 HTATSF1O43719 755 aaKnown RBP22.22■■□□□ 1.15
PHC1-212ENST00000543824 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
PHC1-212ENST00000543824 SYCE3A1L190 88 aa22.22■■□□□ 1.15
PHC1-212ENST00000543824 DIAPH3Q9NSV4 1193 aa22.22■■□□□ 1.15
PHC1-212ENST00000543824 GOLGA6L19H0YKK7 550 aa22.21■■□□□ 1.15
PHC1-212ENST00000543824 HMGN5P82970 282 aaKnown RBP22.21■■□□□ 1.15
PHC1-212ENST00000543824 CABP2Q9NPB3 220 aa22.21■■□□□ 1.15
PHC1-212ENST00000543824 GCC1Q96CN9 775 aa22.2■■□□□ 1.14
PHC1-212ENST00000543824 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
PHC1-212ENST00000543824 BECN2A8MW95 431 aa22.2■■□□□ 1.14
PHC1-212ENST00000543824 CCDC27Q2M243 656 aa22.19■■□□□ 1.14
PHC1-212ENST00000543824 PLEKHH2Q8IVE3 1493 aa22.18■■□□□ 1.14
PHC1-212ENST00000543824 HSP90B1P14625 803 aaKnown RBP22.18■■□□□ 1.14
PHC1-212ENST00000543824 SPC24Q8NBT2 197 aa22.18■■□□□ 1.14
PHC1-212ENST00000543824 SMC3Q9UQE7 1217 aa22.18■■□□□ 1.14
PHC1-212ENST00000543824 NECTIN2Q92692 538 aa22.17■■□□□ 1.14
PHC1-212ENST00000543824 POLA1P09884 1462 aaPredicted RBP22.17■■□□□ 1.14
PHC1-212ENST00000543824 DISP3Q9P2K9 1392 aa22.17■■□□□ 1.14
PHC1-212ENST00000543824 GNAI1P63096 354 aa22.17■■□□□ 1.14
PHC1-212ENST00000543824 SSH1Q8WYL5 1049 aa22.17■■□□□ 1.14
PHC1-212ENST00000543824 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.16■■□□□ 1.14
PHC1-212ENST00000543824 NUTM2FA1L443 756 aa22.16■■□□□ 1.14
PHC1-212ENST00000543824 FIBPO43427 364 aa22.16■■□□□ 1.14
PHC1-212ENST00000543824 CWC22Q9HCG8 908 aaKnown RBP22.15■■□□□ 1.14
PHC1-212ENST00000543824 TNNQ9UQP3 1299 aa22.15■■□□□ 1.14
PHC1-212ENST00000543824 ZHX1Q9UKY1 873 aaPredicted RBP22.14■■□□□ 1.14
PHC1-212ENST00000543824 PRKAR2BP31323 418 aa22.14■■□□□ 1.13
PHC1-212ENST00000543824 STAC3Q96MF2 364 aa22.14■■□□□ 1.13
PHC1-212ENST00000543824 PLEKHH1Q9ULM0 1364 aa22.14■■□□□ 1.13
PHC1-212ENST00000543824 PTPRGP23470 1445 aa22.13■■□□□ 1.13
PHC1-212ENST00000543824 PARD3Q8TEW0 1356 aa22.13■■□□□ 1.13
PHC1-212ENST00000543824 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
PHC1-212ENST00000543824 LMOD2Q6P5Q4 547 aa22.13■■□□□ 1.13
PHC1-212ENST00000543824 BICD2Q8TD16 824 aa22.13■■□□□ 1.13
PHC1-212ENST00000543824 CBX1P83916 185 aa22.12■■□□□ 1.13
PHC1-212ENST00000543824 MLECQ14165 292 aa22.12■■□□□ 1.13
PHC1-212ENST00000543824 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
PHC1-212ENST00000543824 SPINK5Q9NQ38 1064 aaPredicted RBP22.11■■□□□ 1.13
PHC1-212ENST00000543824 H3BQV1 296 aa22.11■■□□□ 1.13
PHC1-212ENST00000543824 TRIM27P14373 513 aa22.11■■□□□ 1.13
PHC1-212ENST00000543824 IFFO2Q5TF58 517 aa22.11■■□□□ 1.13
PHC1-212ENST00000543824 BAG4O95429 457 aaKnown RBP22.1■■□□□ 1.13
PHC1-212ENST00000543824 GNL2Q13823 731 aaKnown RBP22.1■■□□□ 1.13
PHC1-212ENST00000543824 FBXW7Q969H0 707 aa22.1■■□□□ 1.13
PHC1-212ENST00000543824 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
PHC1-212ENST00000543824 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
PHC1-212ENST00000543824 GPATCH3Q96I76 525 aa22.09■■□□□ 1.13
PHC1-212ENST00000543824 CCAR2Q8N163 923 aaKnown RBP22.09■■□□□ 1.13
PHC1-212ENST00000543824 CT47B1P0C2W7 299 aaPredicted RBP22.09■■□□□ 1.13
PHC1-212ENST00000543824 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
PHC1-212ENST00000543824 NPHP1O15259 732 aa22.08■■□□□ 1.13
PHC1-212ENST00000543824 RLBP1P12271 317 aa22.08■■□□□ 1.13
PHC1-212ENST00000543824 TPM4P67936 248 aa22.08■■□□□ 1.13
PHC1-212ENST00000543824 TRIM5Q9C035 493 aa22.08■■□□□ 1.13
PHC1-212ENST00000543824 FKBP5Q13451 457 aaPredicted RBP22.08■■□□□ 1.12
PHC1-212ENST00000543824 SF3A1Q15459 793 aaKnown RBP22.08■■□□□ 1.12
PHC1-212ENST00000543824 RBM27Q9P2N5 1060 aaKnown RBP22.08■■□□□ 1.12
PHC1-212ENST00000543824 DNAJC5BQ9UF47 199 aa22.07■■□□□ 1.12
PHC1-212ENST00000543824 KIF3AQ9Y496 699 aa22.07■■□□□ 1.12
PHC1-212ENST00000543824 PER1O15534 1290 aaPredicted RBP22.07■■□□□ 1.12
PHC1-212ENST00000543824 SASS6Q6UVJ0 657 aa22.06■■□□□ 1.12
PHC1-212ENST00000543824 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
PHC1-212ENST00000543824 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
PHC1-212ENST00000543824 ERC2O15083 957 aa22.06■■□□□ 1.12
PHC1-212ENST00000543824 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
PHC1-212ENST00000543824 RBM42Q9BTD8 480 aaKnown RBP22.06■■□□□ 1.12
PHC1-212ENST00000543824 ZKSCAN1P17029 563 aaPredicted RBP22.06■■□□□ 1.12
PHC1-212ENST00000543824 KLHL40Q2TBA0 621 aa22.06■■□□□ 1.12
PHC1-212ENST00000543824 FAM184AQ8NB25 1140 aa22.06■■□□□ 1.12
PHC1-212ENST00000543824 COG3Q96JB2 828 aa22.05■■□□□ 1.12
PHC1-212ENST00000543824 TPD52L1Q16890 204 aaPredicted RBP22.05■■□□□ 1.12
PHC1-212ENST00000543824 NESP48681 1621 aa22.04■■□□□ 1.12
PHC1-212ENST00000543824 MCM2P49736 904 aa22.04■■□□□ 1.12
PHC1-212ENST00000543824 HOMER1Q86YM7 354 aa22.04■■□□□ 1.12
PHC1-212ENST00000543824 LTV1Q96GA3 475 aaPredicted RBP22.04■■□□□ 1.12
PHC1-212ENST00000543824 THUMPD2Q9BTF0 503 aaKnown RBP22.04■■□□□ 1.12
PHC1-212ENST00000543824 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
PHC1-212ENST00000543824 TBC1D9Q6ZT07 1266 aa22.03■■□□□ 1.12
PHC1-212ENST00000543824 PDCL2Q8N4E4 241 aa22.02■■□□□ 1.12
PHC1-212ENST00000543824 GDPD2Q9HCC8 539 aa22.01■■□□□ 1.11
PHC1-212ENST00000543824 UPF3BQ9BZI7 483 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms