RNA–Protein interactions for RNA: ENST00000543254.1

KLHL42-204, Transcript of kelch like family member 42, humanhuman

TSL 2

Gene KLHL42, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-204ENST00000543254 DLC1Q96QB1 1528 aa17.89■□□□□ 0.45
KLHL42-204ENST00000543254 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
KLHL42-204ENST00000543254 KNDC1Q76NI1 1749 aa17.88■□□□□ 0.45
KLHL42-204ENST00000543254 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.87■□□□□ 0.45
KLHL42-204ENST00000543254 HSPA1LP34931 641 aa17.87■□□□□ 0.45
KLHL42-204ENST00000543254 CARD11Q9BXL7 1154 aa17.87■□□□□ 0.45
KLHL42-204ENST00000543254 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
KLHL42-204ENST00000543254 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
KLHL42-204ENST00000543254 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
KLHL42-204ENST00000543254 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
KLHL42-204ENST00000543254 EIF3AQ14152 1382 aaKnown RBP17.85■□□□□ 0.45
KLHL42-204ENST00000543254 MST1RQ04912 1400 aa17.84■□□□□ 0.45
KLHL42-204ENST00000543254 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
KLHL42-204ENST00000543254 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
KLHL42-204ENST00000543254 ESCO1Q5FWF5 840 aa17.83■□□□□ 0.44
KLHL42-204ENST00000543254 BRINP3Q76B58 766 aa17.83■□□□□ 0.44
KLHL42-204ENST00000543254 CDC42BPGQ6DT37 1551 aa17.82■□□□□ 0.44
KLHL42-204ENST00000543254 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
KLHL42-204ENST00000543254 RALGAPBQ86X10 1494 aa17.81■□□□□ 0.44
KLHL42-204ENST00000543254 TRPM1Q7Z4N2 1603 aa17.8■□□□□ 0.44
KLHL42-204ENST00000543254 ORAI2Q96SN7 254 aa17.8■□□□□ 0.44
KLHL42-204ENST00000543254 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
KLHL42-204ENST00000543254 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
KLHL42-204ENST00000543254 ROBO1Q9Y6N7 1651 aa17.79■□□□□ 0.44
KLHL42-204ENST00000543254 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
KLHL42-204ENST00000543254 CDK19Q9BWU1 502 aa17.75■□□□□ 0.43
KLHL42-204ENST00000543254 ARHGEF28Q8N1W1 1705 aaKnown RBP17.75■□□□□ 0.43
KLHL42-204ENST00000543254 ANKARQ7Z5J8 1434 aa17.74■□□□□ 0.43
KLHL42-204ENST00000543254 NPHP3Q7Z494 1330 aa17.73■□□□□ 0.43
KLHL42-204ENST00000543254 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
KLHL42-204ENST00000543254 DDX17Q92841 729 aaKnown RBP17.73■□□□□ 0.43
KLHL42-204ENST00000543254 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
KLHL42-204ENST00000543254 ADGRB2O60241 1585 aa17.73■□□□□ 0.43
KLHL42-204ENST00000543254 FOXO3O43524 673 aa17.72■□□□□ 0.43
KLHL42-204ENST00000543254 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
KLHL42-204ENST00000543254 PMFBP1Q8TBY8 1022 aa17.7■□□□□ 0.42
KLHL42-204ENST00000543254 LRRC59Q96AG4 307 aaKnown RBP17.7■□□□□ 0.42
KLHL42-204ENST00000543254 TULP4Q9NRJ4 1543 aa17.7■□□□□ 0.42
KLHL42-204ENST00000543254 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
KLHL42-204ENST00000543254 JCADQ9P266 1359 aa17.69■□□□□ 0.42
KLHL42-204ENST00000543254 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
KLHL42-204ENST00000543254 PSME1Q06323 249 aa17.69■□□□□ 0.42
KLHL42-204ENST00000543254 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
KLHL42-204ENST00000543254 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
KLHL42-204ENST00000543254 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
KLHL42-204ENST00000543254 USP47Q96K76 1375 aa17.68■□□□□ 0.42
KLHL42-204ENST00000543254 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
KLHL42-204ENST00000543254 PHLPP1O60346 1717 aa17.68■□□□□ 0.42
KLHL42-204ENST00000543254 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
KLHL42-204ENST00000543254 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
KLHL42-204ENST00000543254 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
KLHL42-204ENST00000543254 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
KLHL42-204ENST00000543254 QRICH2Q9H0J4 1663 aa17.66■□□□□ 0.42
KLHL42-204ENST00000543254 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
KLHL42-204ENST00000543254 SBNO2Q9Y2G9 1366 aa17.65■□□□□ 0.42
KLHL42-204ENST00000543254 ATP7BP35670 1465 aa17.63■□□□□ 0.41
KLHL42-204ENST00000543254 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
KLHL42-204ENST00000543254 KIF1AQ12756 1690 aa17.63■□□□□ 0.41
KLHL42-204ENST00000543254 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
KLHL42-204ENST00000543254 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
KLHL42-204ENST00000543254 SPATA31A6Q5VVP1 1343 aa17.62■□□□□ 0.41
KLHL42-204ENST00000543254 ATAD2Q6PL18 1390 aa17.62■□□□□ 0.41
KLHL42-204ENST00000543254 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
KLHL42-204ENST00000543254 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
KLHL42-204ENST00000543254 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
KLHL42-204ENST00000543254 TMF1P82094 1093 aa17.61■□□□□ 0.41
KLHL42-204ENST00000543254 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
KLHL42-204ENST00000543254 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
KLHL42-204ENST00000543254 PHF23Q9BUL5 403 aaPredicted RBP17.61■□□□□ 0.41
KLHL42-204ENST00000543254 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
KLHL42-204ENST00000543254 PPIP5K1Q6PFW1 1433 aa17.61■□□□□ 0.41
KLHL42-204ENST00000543254 NHSL1Q5SYE7 1610 aa17.61■□□□□ 0.41
KLHL42-204ENST00000543254 PLEKHG3A1L390 1219 aa17.6■□□□□ 0.41
KLHL42-204ENST00000543254 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
KLHL42-204ENST00000543254 PXDNQ92626 1479 aa17.59■□□□□ 0.41
KLHL42-204ENST00000543254 ACEP12821 1306 aa17.59■□□□□ 0.41
KLHL42-204ENST00000543254 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
KLHL42-204ENST00000543254 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
KLHL42-204ENST00000543254 TESK2Q96S53 571 aa17.59■□□□□ 0.41
KLHL42-204ENST00000543254 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
KLHL42-204ENST00000543254 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
KLHL42-204ENST00000543254 SBNO1A3KN83 1393 aa17.57■□□□□ 0.4
KLHL42-204ENST00000543254 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
KLHL42-204ENST00000543254 DISP3Q9P2K9 1392 aa17.56■□□□□ 0.4
KLHL42-204ENST00000543254 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
KLHL42-204ENST00000543254 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
KLHL42-204ENST00000543254 POLR3AO14802 1390 aaPredicted RBP17.55■□□□□ 0.4
KLHL42-204ENST00000543254 ARHGEF10O15013 1369 aa17.55■□□□□ 0.4
KLHL42-204ENST00000543254 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
KLHL42-204ENST00000543254 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
KLHL42-204ENST00000543254 RGPD8O14715 1765 aaPredicted RBP17.54■□□□□ 0.4
KLHL42-204ENST00000543254 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
KLHL42-204ENST00000543254 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
KLHL42-204ENST00000543254 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
KLHL42-204ENST00000543254 MED1Q15648 1581 aaPredicted RBP17.53■□□□□ 0.4
KLHL42-204ENST00000543254 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
KLHL42-204ENST00000543254 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.4
KLHL42-204ENST00000543254 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.4
KLHL42-204ENST00000543254 SHPRHQ149N8 1683 aa17.51■□□□□ 0.39
KLHL42-204ENST00000543254 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms