RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.37■■□□□ 1.49
RABGGTA-203ENST00000543002 DCCP43146 1447 aa24.37■■□□□ 1.49
RABGGTA-203ENST00000543002 CADPS2Q86UW7 1296 aa24.35■■□□□ 1.49
RABGGTA-203ENST00000543002 ARHGEF28Q8N1W1 1705 aaKnown RBP24.35■■□□□ 1.49
RABGGTA-203ENST00000543002 ATF3P18847 181 aa24.35■■□□□ 1.49
RABGGTA-203ENST00000543002 SAFB2Q14151 953 aaKnown RBP eCLIP24.34■■□□□ 1.49
RABGGTA-203ENST00000543002 CARD11Q9BXL7 1154 aa24.34■■□□□ 1.49
RABGGTA-203ENST00000543002 CDC42BPGQ6DT37 1551 aa24.29■■□□□ 1.48
RABGGTA-203ENST00000543002 SLAIN2Q9P270 581 aa24.29■■□□□ 1.48
RABGGTA-203ENST00000543002 CENPJQ9HC77 1338 aaPredicted RBP24.28■■□□□ 1.48
RABGGTA-203ENST00000543002 EIF3AQ14152 1382 aaKnown RBP24.27■■□□□ 1.48
RABGGTA-203ENST00000543002 PIP4K2BP78356 416 aa24.27■■□□□ 1.48
RABGGTA-203ENST00000543002 MST1RQ04912 1400 aa24.26■■□□□ 1.47
RABGGTA-203ENST00000543002 MINK1Q8N4C8 1332 aaPredicted RBP24.26■■□□□ 1.47
RABGGTA-203ENST00000543002 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
RABGGTA-203ENST00000543002 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
RABGGTA-203ENST00000543002 HIRIP3Q9BW71 556 aaPredicted RBP24.24■■□□□ 1.47
RABGGTA-203ENST00000543002 C1orf167Q5SNV9 1468 aa24.21■■□□□ 1.47
RABGGTA-203ENST00000543002 WASLO00401 505 aaPredicted RBP24.2■■□□□ 1.46
RABGGTA-203ENST00000543002 QRICH2Q9H0J4 1663 aa24.2■■□□□ 1.46
RABGGTA-203ENST00000543002 FMN2Q9NZ56 1722 aa24.2■■□□□ 1.46
RABGGTA-203ENST00000543002 ILDR1Q86SU0 546 aaPredicted RBP24.18■■□□□ 1.46
RABGGTA-203ENST00000543002 ROBO1Q9Y6N7 1651 aa24.17■■□□□ 1.46
RABGGTA-203ENST00000543002 USP47Q96K76 1375 aa24.16■■□□□ 1.46
RABGGTA-203ENST00000543002 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
RABGGTA-203ENST00000543002 NUTM2FA1L443 756 aa24.16■■□□□ 1.46
RABGGTA-203ENST00000543002 BRINP3Q76B58 766 aa24.16■■□□□ 1.46
RABGGTA-203ENST00000543002 ST20-MTHFSA0A0A6YYL1 179 aa24.14■■□□□ 1.46
RABGGTA-203ENST00000543002 CDK19Q9BWU1 502 aa24.14■■□□□ 1.46
RABGGTA-203ENST00000543002 ANKARQ7Z5J8 1434 aa24.14■■□□□ 1.46
RABGGTA-203ENST00000543002 ORAI2Q96SN7 254 aa24.13■■□□□ 1.45
RABGGTA-203ENST00000543002 TULP4Q9NRJ4 1543 aa24.13■■□□□ 1.45
RABGGTA-203ENST00000543002 ESCO1Q5FWF5 840 aa24.11■■□□□ 1.45
RABGGTA-203ENST00000543002 EVC2Q86UK5 1308 aa24.11■■□□□ 1.45
RABGGTA-203ENST00000543002 PRR36Q9H6K5 1346 aa24.1■■□□□ 1.45
RABGGTA-203ENST00000543002 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
RABGGTA-203ENST00000543002 TESK2Q96S53 571 aa24.1■■□□□ 1.45
RABGGTA-203ENST00000543002 HSPA1LP34931 641 aa24.09■■□□□ 1.45
RABGGTA-203ENST00000543002 SLC24A1O60721 1099 aa24.08■■□□□ 1.44
RABGGTA-203ENST00000543002 SRPK2P78362 688 aaKnown RBP24.08■■□□□ 1.44
RABGGTA-203ENST00000543002 NUDT16Q96DE0 195 aaKnown RBP24.08■■□□□ 1.44
RABGGTA-203ENST00000543002 ATP7BP35670 1465 aa24.07■■□□□ 1.44
RABGGTA-203ENST00000543002 RGPD8O14715 1765 aaPredicted RBP24.07■■□□□ 1.44
RABGGTA-203ENST00000543002 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
RABGGTA-203ENST00000543002 CABP2Q9NPB3 220 aa24.06■■□□□ 1.44
RABGGTA-203ENST00000543002 AHDC1Q5TGY3 1603 aaPredicted RBP24.05■■□□□ 1.44
RABGGTA-203ENST00000543002 PHF8Q9UPP1 1060 aa24.05■■□□□ 1.44
RABGGTA-203ENST00000543002 CCDC61Q9Y6R9 512 aa24.04■■□□□ 1.44
RABGGTA-203ENST00000543002 NHSL1Q5SYE7 1610 aa24.03■■□□□ 1.44
RABGGTA-203ENST00000543002 KIF1AQ12756 1690 aa24.03■■□□□ 1.44
RABGGTA-203ENST00000543002 HSPA5P11021 654 aaKnown RBP24.02■■□□□ 1.44
RABGGTA-203ENST00000543002 DDX17Q92841 729 aaKnown RBP24.02■■□□□ 1.44
RABGGTA-203ENST00000543002 PHLPP1O60346 1717 aa24.01■■□□□ 1.43
RABGGTA-203ENST00000543002 NPHP3Q7Z494 1330 aa24.01■■□□□ 1.43
RABGGTA-203ENST00000543002 FOXO3O43524 673 aa24.01■■□□□ 1.43
RABGGTA-203ENST00000543002 ITSN1Q15811 1721 aa24■■□□□ 1.43
RABGGTA-203ENST00000543002 PMFBP1Q8TBY8 1022 aa24■■□□□ 1.43
RABGGTA-203ENST00000543002 TMF1P82094 1093 aa23.99■■□□□ 1.43
RABGGTA-203ENST00000543002 PUS7Q96PZ0 661 aaKnown RBP23.99■■□□□ 1.43
RABGGTA-203ENST00000543002 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
RABGGTA-203ENST00000543002 ATAD2Q6PL18 1390 aa23.98■■□□□ 1.43
RABGGTA-203ENST00000543002 SOS2Q07890 1332 aaPredicted RBP23.98■■□□□ 1.43
RABGGTA-203ENST00000543002 PLEKHG3A1L390 1219 aa23.98■■□□□ 1.43
RABGGTA-203ENST00000543002 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
RABGGTA-203ENST00000543002 COL16A1Q07092 1604 aaPredicted RBP23.98■■□□□ 1.43
RABGGTA-203ENST00000543002 PPIP5K1Q6PFW1 1433 aa23.96■■□□□ 1.43
RABGGTA-203ENST00000543002 DISP3Q9P2K9 1392 aa23.96■■□□□ 1.43
RABGGTA-203ENST00000543002 NGDNQ8NEJ9 315 aaKnown RBP23.94■■□□□ 1.42
RABGGTA-203ENST00000543002 CABP1Q9NZU7 370 aa23.94■■□□□ 1.42
RABGGTA-203ENST00000543002 PXDNQ92626 1479 aa23.94■■□□□ 1.42
RABGGTA-203ENST00000543002 XPCQ01831 940 aaPredicted RBP23.93■■□□□ 1.42
RABGGTA-203ENST00000543002 PSME1Q06323 249 aa23.93■■□□□ 1.42
RABGGTA-203ENST00000543002 KRT28Q7Z3Y7 464 aa23.93■■□□□ 1.42
RABGGTA-203ENST00000543002 LRRC59Q96AG4 307 aaKnown RBP23.93■■□□□ 1.42
RABGGTA-203ENST00000543002 POLR3AO14802 1390 aaPredicted RBP23.93■■□□□ 1.42
RABGGTA-203ENST00000543002 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
RABGGTA-203ENST00000543002 ACEP12821 1306 aa23.92■■□□□ 1.42
RABGGTA-203ENST00000543002 JCADQ9P266 1359 aa23.9■■□□□ 1.42
RABGGTA-203ENST00000543002 SBNO1A3KN83 1393 aa23.87■■□□□ 1.41
RABGGTA-203ENST00000543002 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
RABGGTA-203ENST00000543002 SLC12A5Q9H2X9 1139 aa23.85■■□□□ 1.41
RABGGTA-203ENST00000543002 SPATA31A3Q5VYP0 1347 aa23.85■■□□□ 1.41
RABGGTA-203ENST00000543002 NINLQ9Y2I6 1382 aa23.85■■□□□ 1.41
RABGGTA-203ENST00000543002 PNPLA6Q8IY17 1366 aa23.84■■□□□ 1.41
RABGGTA-203ENST00000543002 ZNF692Q9BU19 519 aaPredicted RBP23.84■■□□□ 1.41
RABGGTA-203ENST00000543002 CPSF1Q10570 1443 aaKnown RBP23.83■■□□□ 1.41
RABGGTA-203ENST00000543002 TNS3Q68CZ2 1445 aa23.83■■□□□ 1.41
RABGGTA-203ENST00000543002 SHPRHQ149N8 1683 aa23.83■■□□□ 1.4
RABGGTA-203ENST00000543002 TRPM3Q9HCF6 1732 aaPredicted RBP23.83■■□□□ 1.4
RABGGTA-203ENST00000543002 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
RABGGTA-203ENST00000543002 USP6P35125 1406 aa23.81■■□□□ 1.4
RABGGTA-203ENST00000543002 C11orf95C9JLR9 678 aaPredicted RBP23.81■■□□□ 1.4
RABGGTA-203ENST00000543002 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
RABGGTA-203ENST00000543002 SPATA31A6Q5VVP1 1343 aa23.8■■□□□ 1.4
RABGGTA-203ENST00000543002 TERF2IPQ9NYB0 399 aa23.8■■□□□ 1.4
RABGGTA-203ENST00000543002 AKAP12Q02952 1782 aa23.79■■□□□ 1.4
RABGGTA-203ENST00000543002 ARHGEF10O15013 1369 aa23.79■■□□□ 1.4
RABGGTA-203ENST00000543002 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
RABGGTA-203ENST00000543002 HDGFL2Q7Z4V5 671 aaPredicted RBP23.79■■□□□ 1.4
RABGGTA-203ENST00000543002 KTN1Q86UP2 1357 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms