RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
VTN-203ENST00000542029 ESCO1Q5FWF5 840 aa16.73■□□□□ 0.27
VTN-203ENST00000542029 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
VTN-203ENST00000542029 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
VTN-203ENST00000542029 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
VTN-203ENST00000542029 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
VTN-203ENST00000542029 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
VTN-203ENST00000542029 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
VTN-203ENST00000542029 NALCNQ8IZF0 1738 aa16.7■□□□□ 0.26
VTN-203ENST00000542029 MYOM2P54296 1465 aa16.7■□□□□ 0.26
VTN-203ENST00000542029 RXRBP28702 533 aa16.7■□□□□ 0.26
VTN-203ENST00000542029 CFAP70Q5T0N1 1121 aa16.7■□□□□ 0.26
VTN-203ENST00000542029 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
VTN-203ENST00000542029 NHSL1Q5SYE7 1610 aa16.69■□□□□ 0.26
VTN-203ENST00000542029 AFF2P51816 1311 aa16.69■□□□□ 0.26
VTN-203ENST00000542029 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
VTN-203ENST00000542029 FOXO3O43524 673 aa16.67■□□□□ 0.26
VTN-203ENST00000542029 C8orf37Q96NL8 207 aa16.67■□□□□ 0.26
VTN-203ENST00000542029 PLEKHH1Q9ULM0 1364 aa16.66■□□□□ 0.26
VTN-203ENST00000542029 NGLY1Q96IV0 654 aa16.66■□□□□ 0.26
VTN-203ENST00000542029 ADAMTS2O95450 1211 aa16.65■□□□□ 0.26
VTN-203ENST00000542029 POGKQ9P215 609 aa16.65■□□□□ 0.26
VTN-203ENST00000542029 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
VTN-203ENST00000542029 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
VTN-203ENST00000542029 PRAM1Q96QH2 718 aa16.64■□□□□ 0.25
VTN-203ENST00000542029 LAMC1P11047 1609 aa16.63■□□□□ 0.25
VTN-203ENST00000542029 RBM6P78332 1123 aaKnown RBP16.63■□□□□ 0.25
VTN-203ENST00000542029 QTRT2Q9H974 415 aaKnown RBP16.63■□□□□ 0.25
VTN-203ENST00000542029 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
VTN-203ENST00000542029 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
VTN-203ENST00000542029 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
VTN-203ENST00000542029 PSME1Q06323 249 aa16.61■□□□□ 0.25
VTN-203ENST00000542029 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
VTN-203ENST00000542029 PHF8Q9UPP1 1060 aa16.6■□□□□ 0.25
VTN-203ENST00000542029 XPCQ01831 940 aaPredicted RBP16.59■□□□□ 0.25
VTN-203ENST00000542029 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
VTN-203ENST00000542029 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
VTN-203ENST00000542029 USP21Q9UK80 565 aa16.59■□□□□ 0.25
VTN-203ENST00000542029 TRPC5Q9UL62 973 aaPredicted RBP16.59■□□□□ 0.25
VTN-203ENST00000542029 DLC1Q96QB1 1528 aa16.59■□□□□ 0.25
VTN-203ENST00000542029 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
VTN-203ENST00000542029 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
VTN-203ENST00000542029 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
VTN-203ENST00000542029 EIF3AQ14152 1382 aaKnown RBP16.58■□□□□ 0.24
VTN-203ENST00000542029 PXDNQ92626 1479 aa16.58■□□□□ 0.24
VTN-203ENST00000542029 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
VTN-203ENST00000542029 UPF1Q92900 1129 aaKnown RBP eCLIP16.55■□□□□ 0.24
VTN-203ENST00000542029 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
VTN-203ENST00000542029 SBNO1A3KN83 1393 aa16.53■□□□□ 0.24
VTN-203ENST00000542029 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
VTN-203ENST00000542029 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.24
VTN-203ENST00000542029 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
VTN-203ENST00000542029 MINK1Q8N4C8 1332 aaPredicted RBP16.51■□□□□ 0.23
VTN-203ENST00000542029 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
VTN-203ENST00000542029 COL22A1Q8NFW1 1626 aaPredicted RBP16.51■□□□□ 0.23
VTN-203ENST00000542029 TNS3Q68CZ2 1445 aa16.51■□□□□ 0.23
VTN-203ENST00000542029 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
VTN-203ENST00000542029 PMFBP1Q8TBY8 1022 aa16.5■□□□□ 0.23
VTN-203ENST00000542029 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
VTN-203ENST00000542029 GPRASP1Q5JY77 1395 aa16.5■□□□□ 0.23
VTN-203ENST00000542029 RGS12O14924 1447 aa16.49■□□□□ 0.23
VTN-203ENST00000542029 ATRNO75882 1429 aa16.49■□□□□ 0.23
VTN-203ENST00000542029 LMOD2Q6P5Q4 547 aa16.49■□□□□ 0.23
VTN-203ENST00000542029 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
VTN-203ENST00000542029 NGDNQ8NEJ9 315 aaKnown RBP16.47■□□□□ 0.23
VTN-203ENST00000542029 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
VTN-203ENST00000542029 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
VTN-203ENST00000542029 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
VTN-203ENST00000542029 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
VTN-203ENST00000542029 ATAD2Q6PL18 1390 aa16.45■□□□□ 0.22
VTN-203ENST00000542029 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
VTN-203ENST00000542029 SLIT2O94813 1529 aa16.44■□□□□ 0.22
VTN-203ENST00000542029 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
VTN-203ENST00000542029 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
VTN-203ENST00000542029 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
VTN-203ENST00000542029 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
VTN-203ENST00000542029 VPS72Q15906 364 aa16.41■□□□□ 0.22
VTN-203ENST00000542029 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
VTN-203ENST00000542029 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
VTN-203ENST00000542029 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.21
VTN-203ENST00000542029 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
VTN-203ENST00000542029 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
VTN-203ENST00000542029 PLEKHG3A1L390 1219 aa16.38■□□□□ 0.21
VTN-203ENST00000542029 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
VTN-203ENST00000542029 CENPJQ9HC77 1338 aaPredicted RBP16.38■□□□□ 0.21
VTN-203ENST00000542029 CCDC9Q9Y3X0 531 aaKnown RBP16.37■□□□□ 0.21
VTN-203ENST00000542029 USP32Q8NFA0 1604 aa16.37■□□□□ 0.21
VTN-203ENST00000542029 ATP7BP35670 1465 aa16.36■□□□□ 0.21
VTN-203ENST00000542029 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
VTN-203ENST00000542029 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
VTN-203ENST00000542029 SRPK2P78362 688 aaKnown RBP16.35■□□□□ 0.21
VTN-203ENST00000542029 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
VTN-203ENST00000542029 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
VTN-203ENST00000542029 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
VTN-203ENST00000542029 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
VTN-203ENST00000542029 BTG4Q9NY30 223 aa16.34■□□□□ 0.21
VTN-203ENST00000542029 ACEP12821 1306 aa16.34■□□□□ 0.21
VTN-203ENST00000542029 KIAA1210Q9ULL0 1709 aa16.33■□□□□ 0.21
VTN-203ENST00000542029 NEUROD1Q13562 356 aa16.33■□□□□ 0.2
VTN-203ENST00000542029 PRDM11Q9NQV5 511 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms