RNA–Protein interactions for RNA: ENST00000541645.1

UBC-210, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-210ENST00000541645 MST1RQ04912 1400 aa25.68■■□□□ 1.7
UBC-210ENST00000541645 NALCNQ8IZF0 1738 aa25.68■■□□□ 1.7
UBC-210ENST00000541645 HSPA1LP34931 641 aa25.67■■□□□ 1.7
UBC-210ENST00000541645 POGKQ9P215 609 aa25.66■■□□□ 1.7
UBC-210ENST00000541645 CDC42BPGQ6DT37 1551 aa25.65■■□□□ 1.7
UBC-210ENST00000541645 CCER1Q8TC90 406 aaPredicted RBP25.64■■□□□ 1.7
UBC-210ENST00000541645 NBPF8Q3BBV2 869 aa25.63■■□□□ 1.69
UBC-210ENST00000541645 ROBO1Q9Y6N7 1651 aa25.61■■□□□ 1.69
UBC-210ENST00000541645 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
UBC-210ENST00000541645 BRINP3Q76B58 766 aa25.61■■□□□ 1.69
UBC-210ENST00000541645 GPRASP1Q5JY77 1395 aa25.59■■□□□ 1.69
UBC-210ENST00000541645 SAFB2Q14151 953 aaKnown RBP eCLIP25.59■■□□□ 1.69
UBC-210ENST00000541645 ROCK2O75116 1388 aaKnown RBP25.58■■□□□ 1.69
UBC-210ENST00000541645 TRPM1Q7Z4N2 1603 aa25.58■■□□□ 1.69
UBC-210ENST00000541645 ADGRB2O60241 1585 aa25.54■■□□□ 1.68
UBC-210ENST00000541645 RALGAPBQ86X10 1494 aa25.53■■□□□ 1.68
UBC-210ENST00000541645 ARHGEF28Q8N1W1 1705 aaKnown RBP25.53■■□□□ 1.68
UBC-210ENST00000541645 ORAI2Q96SN7 254 aa25.52■■□□□ 1.68
UBC-210ENST00000541645 MINK1Q8N4C8 1332 aaPredicted RBP25.52■■□□□ 1.68
UBC-210ENST00000541645 CENPJQ9HC77 1338 aaPredicted RBP25.51■■□□□ 1.67
UBC-210ENST00000541645 AHDC1Q5TGY3 1603 aaPredicted RBP25.51■■□□□ 1.67
UBC-210ENST00000541645 WASLO00401 505 aaPredicted RBP25.5■■□□□ 1.67
UBC-210ENST00000541645 EIF3AQ14152 1382 aaKnown RBP25.49■■□□□ 1.67
UBC-210ENST00000541645 ESCO1Q5FWF5 840 aa25.49■■□□□ 1.67
UBC-210ENST00000541645 HIRIP3Q9BW71 556 aaPredicted RBP25.49■■□□□ 1.67
UBC-210ENST00000541645 CARD11Q9BXL7 1154 aa25.49■■□□□ 1.67
UBC-210ENST00000541645 ANKARQ7Z5J8 1434 aa25.48■■□□□ 1.67
UBC-210ENST00000541645 FMN2Q9NZ56 1722 aa25.48■■□□□ 1.67
UBC-210ENST00000541645 NUTM2FA1L443 756 aa25.46■■□□□ 1.67
UBC-210ENST00000541645 COL16A1Q07092 1604 aaPredicted RBP25.43■■□□□ 1.66
UBC-210ENST00000541645 PHLPP1O60346 1717 aa25.43■■□□□ 1.66
UBC-210ENST00000541645 NPHP3Q7Z494 1330 aa25.42■■□□□ 1.66
UBC-210ENST00000541645 JCADQ9P266 1359 aa25.42■■□□□ 1.66
UBC-210ENST00000541645 TULP4Q9NRJ4 1543 aa25.42■■□□□ 1.66
UBC-210ENST00000541645 NHSL1Q5SYE7 1610 aa25.41■■□□□ 1.66
UBC-210ENST00000541645 SOS2Q07890 1332 aaPredicted RBP25.41■■□□□ 1.66
UBC-210ENST00000541645 LRRC59Q96AG4 307 aaKnown RBP25.41■■□□□ 1.66
UBC-210ENST00000541645 CDK19Q9BWU1 502 aa25.41■■□□□ 1.66
UBC-210ENST00000541645 DDX17Q92841 729 aaKnown RBP25.4■■□□□ 1.66
UBC-210ENST00000541645 PRR36Q9H6K5 1346 aa25.39■■□□□ 1.66
UBC-210ENST00000541645 PHF8Q9UPP1 1060 aa25.39■■□□□ 1.66
UBC-210ENST00000541645 FOXO3O43524 673 aa25.38■■□□□ 1.65
UBC-210ENST00000541645 SBNO2Q9Y2G9 1366 aa25.38■■□□□ 1.65
UBC-210ENST00000541645 NUDT16Q96DE0 195 aaKnown RBP25.37■■□□□ 1.65
UBC-210ENST00000541645 USP32Q8NFA0 1604 aa25.36■■□□□ 1.65
UBC-210ENST00000541645 KIF1AQ12756 1690 aa25.35■■□□□ 1.65
UBC-210ENST00000541645 EVC2Q86UK5 1308 aa25.35■■□□□ 1.65
UBC-210ENST00000541645 ATP7BP35670 1465 aa25.34■■□□□ 1.65
UBC-210ENST00000541645 CCDC61Q9Y6R9 512 aa25.34■■□□□ 1.65
UBC-210ENST00000541645 PXDNQ92626 1479 aa25.34■■□□□ 1.65
UBC-210ENST00000541645 SPATA31A6Q5VVP1 1343 aa25.33■■□□□ 1.64
UBC-210ENST00000541645 QRICH2Q9H0J4 1663 aa25.32■■□□□ 1.64
UBC-210ENST00000541645 SRPK2P78362 688 aaKnown RBP25.32■■□□□ 1.64
UBC-210ENST00000541645 SLC24A1O60721 1099 aa25.31■■□□□ 1.64
UBC-210ENST00000541645 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
UBC-210ENST00000541645 PLEKHG3A1L390 1219 aa25.29■■□□□ 1.64
UBC-210ENST00000541645 PSME1Q06323 249 aa25.29■■□□□ 1.64
UBC-210ENST00000541645 KRT28Q7Z3Y7 464 aa25.29■■□□□ 1.64
UBC-210ENST00000541645 CABP2Q9NPB3 220 aa25.28■■□□□ 1.64
UBC-210ENST00000541645 PNPLA6Q8IY17 1366 aa25.28■■□□□ 1.64
UBC-210ENST00000541645 ST20-MTHFSA0A0A6YYL1 179 aa25.27■■□□□ 1.64
UBC-210ENST00000541645 XPCQ01831 940 aaPredicted RBP25.27■■□□□ 1.64
UBC-210ENST00000541645 SHPRHQ149N8 1683 aa25.26■■□□□ 1.63
UBC-210ENST00000541645 USP47Q96K76 1375 aa25.26■■□□□ 1.63
UBC-210ENST00000541645 RGPD8O14715 1765 aaPredicted RBP25.26■■□□□ 1.63
UBC-210ENST00000541645 NGDNQ8NEJ9 315 aaKnown RBP25.25■■□□□ 1.63
UBC-210ENST00000541645 TESK2Q96S53 571 aa25.25■■□□□ 1.63
UBC-210ENST00000541645 SPATA31A3Q5VYP0 1347 aa25.25■■□□□ 1.63
UBC-210ENST00000541645 SBNO1A3KN83 1393 aa25.25■■□□□ 1.63
UBC-210ENST00000541645 POLR3AO14802 1390 aaPredicted RBP25.25■■□□□ 1.63
UBC-210ENST00000541645 MED1Q15648 1581 aaPredicted RBP25.25■■□□□ 1.63
UBC-210ENST00000541645 PUS7Q96PZ0 661 aaKnown RBP25.24■■□□□ 1.63
UBC-210ENST00000541645 PPIP5K1Q6PFW1 1433 aa25.21■■□□□ 1.63
UBC-210ENST00000541645 ATAD2Q6PL18 1390 aa25.21■■□□□ 1.63
UBC-210ENST00000541645 ITSN1Q15811 1721 aa25.21■■□□□ 1.63
UBC-210ENST00000541645 TOPAZ1Q8N9V7 1692 aa25.21■■□□□ 1.63
UBC-210ENST00000541645 ACEP12821 1306 aa25.2■■□□□ 1.62
UBC-210ENST00000541645 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
UBC-210ENST00000541645 CABP1Q9NZU7 370 aa25.19■■□□□ 1.62
UBC-210ENST00000541645 TNS3Q68CZ2 1445 aa25.19■■□□□ 1.62
UBC-210ENST00000541645 ARHGEF10O15013 1369 aa25.17■■□□□ 1.62
UBC-210ENST00000541645 LRP6O75581 1613 aa25.16■■□□□ 1.62
UBC-210ENST00000541645 COL22A1Q8NFW1 1626 aaPredicted RBP25.15■■□□□ 1.62
UBC-210ENST00000541645 BRD4O60885 1362 aaPredicted RBP25.15■■□□□ 1.62
UBC-210ENST00000541645 NUTM2BA6NNL0 878 aaPredicted RBP25.14■■□□□ 1.62
UBC-210ENST00000541645 NUTM2EB1AL46 878 aaPredicted RBP25.14■■□□□ 1.62
UBC-210ENST00000541645 NUTM2AQ8IVF1 878 aaPredicted RBP25.14■■□□□ 1.62
UBC-210ENST00000541645 TMF1P82094 1093 aa25.13■■□□□ 1.61
UBC-210ENST00000541645 EIF4G2P78344 907 aaKnown RBP eCLIP25.12■■□□□ 1.61
UBC-210ENST00000541645 ZNF692Q9BU19 519 aaPredicted RBP25.12■■□□□ 1.61
UBC-210ENST00000541645 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
UBC-210ENST00000541645 MEX3CQ5U5Q3 659 aaKnown RBP25.11■■□□□ 1.61
UBC-210ENST00000541645 TRPM3Q9HCF6 1732 aaPredicted RBP25.1■■□□□ 1.61
UBC-210ENST00000541645 PAK3O75914 559 aaPredicted RBP25.09■■□□□ 1.61
UBC-210ENST00000541645 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
UBC-210ENST00000541645 LMOD2Q6P5Q4 547 aa25.09■■□□□ 1.61
UBC-210ENST00000541645 NINLQ9Y2I6 1382 aa25.08■■□□□ 1.61
UBC-210ENST00000541645 USP6P35125 1406 aa25.08■■□□□ 1.61
UBC-210ENST00000541645 CPSF1Q10570 1443 aaKnown RBP25.08■■□□□ 1.61
UBC-210ENST00000541645 RGS17Q9UGC6 210 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms