RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 RNF217Q8TC41 542 aa9.17□□□□□ -0.94
PPME1-206ENST00000541340 NAIPQ13075 1403 aa9.17□□□□□ -0.94
PPME1-206ENST00000541340 CCDC172P0C7W6 258 aa9.17□□□□□ -0.94
PPME1-206ENST00000541340 TRERF1Q96PN7 1200 aa9.17□□□□□ -0.94
PPME1-206ENST00000541340 TNNT3P45378 269 aaPredicted RBP9.16□□□□□ -0.94
PPME1-206ENST00000541340 GTF2A1P52655 376 aaPredicted RBP9.16□□□□□ -0.94
PPME1-206ENST00000541340 MCM5P33992 734 aa9.16□□□□□ -0.94
PPME1-206ENST00000541340 GOLIM4O00461 696 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 PRIMPOLQ96LW4 560 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 FEZ1Q99689 392 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 BCL2L12Q9HB09 334 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 PTPN23Q9H3S7 1636 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 OGFRQ9NZT2 677 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 RSPH14Q9UHP6 348 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 MAP3K4Q9Y6R4 1608 aa9.15□□□□□ -0.94
PPME1-206ENST00000541340 BCORL1Q5H9F3 1711 aa9.15□□□□□ -0.95
PPME1-206ENST00000541340 HFM1A2PYH4 1435 aa9.15□□□□□ -0.95
PPME1-206ENST00000541340 HMGN5P82970 282 aaKnown RBP9.14□□□□□ -0.95
PPME1-206ENST00000541340 CDCA8Q53HL2 280 aa9.14□□□□□ -0.95
PPME1-206ENST00000541340 PDLIM2Q96JY6 352 aa9.14□□□□□ -0.95
PPME1-206ENST00000541340 CHMP5Q9NZZ3 219 aa9.14□□□□□ -0.95
PPME1-206ENST00000541340 MFAP1P55081 439 aaKnown RBP9.14□□□□□ -0.95
PPME1-206ENST00000541340 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
PPME1-206ENST00000541340 DHX16O60231 1041 aaKnown RBP9.14□□□□□ -0.95
PPME1-206ENST00000541340 TERF2Q15554 542 aa9.14□□□□□ -0.95
PPME1-206ENST00000541340 TMX1Q9H3N1 280 aa9.14□□□□□ -0.95
PPME1-206ENST00000541340 MAP2K1Q02750 393 aaPredicted RBP9.13□□□□□ -0.95
PPME1-206ENST00000541340 RGL3Q3MIN7 710 aa9.13□□□□□ -0.95
PPME1-206ENST00000541340 UPF2Q9HAU5 1272 aaKnown RBP9.13□□□□□ -0.95
PPME1-206ENST00000541340 ERICH4A6NGS2 130 aa9.12□□□□□ -0.95
PPME1-206ENST00000541340 CFAP43Q8NDM7 1665 aa9.12□□□□□ -0.95
PPME1-206ENST00000541340 RBM25P49756 843 aaKnown RBP9.12□□□□□ -0.95
PPME1-206ENST00000541340 SGSM3Q96HU1 749 aa9.12□□□□□ -0.95
PPME1-206ENST00000541340 FOXD4L1Q9NU39 408 aa9.12□□□□□ -0.95
PPME1-206ENST00000541340 ICE2Q659A1 982 aa9.11□□□□□ -0.95
PPME1-206ENST00000541340 ANKRD7Q92527 254 aa9.11□□□□□ -0.95
PPME1-206ENST00000541340 MPHOSPH9Q99550 1183 aa9.11□□□□□ -0.95
PPME1-206ENST00000541340 FANCD2Q9BXW9 1451 aa9.11□□□□□ -0.95
PPME1-206ENST00000541340 MAGI1Q96QZ7 1491 aaPredicted RBP9.11□□□□□ -0.95
PPME1-206ENST00000541340 RAD51AP2Q09MP3 1159 aa9.11□□□□□ -0.95
PPME1-206ENST00000541340 PRDM16Q9HAZ2 1276 aa9.11□□□□□ -0.95
PPME1-206ENST00000541340 KIF16BQ96L93 1317 aa9.1□□□□□ -0.95
PPME1-206ENST00000541340 FGD6Q6ZV73 1430 aa9.1□□□□□ -0.95
PPME1-206ENST00000541340 HSP90AB1P08238 724 aaKnown RBP9.1□□□□□ -0.95
PPME1-206ENST00000541340 TBC1D32Q96NH3 1257 aa9.1□□□□□ -0.95
PPME1-206ENST00000541340 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
PPME1-206ENST00000541340 MYBBP1AQ9BQG0 1328 aaKnown RBP9.1□□□□□ -0.95
PPME1-206ENST00000541340 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
PPME1-206ENST00000541340 BCAR3O75815 825 aa9.1□□□□□ -0.95
PPME1-206ENST00000541340 DNAJC21Q5F1R6 531 aaKnown RBP9.1□□□□□ -0.95
PPME1-206ENST00000541340 GPATCH11Q8N954 259 aa9.1□□□□□ -0.95
PPME1-206ENST00000541340 SKOR2Q2VWA4 1001 aaPredicted RBP9.1□□□□□ -0.95
PPME1-206ENST00000541340 FMN1Q68DA7 1419 aa9.09□□□□□ -0.95
PPME1-206ENST00000541340 USP47Q96K76 1375 aa9.09□□□□□ -0.95
PPME1-206ENST00000541340 GUCY2CP25092 1073 aa9.09□□□□□ -0.95
PPME1-206ENST00000541340 NBPF11Q86T75 865 aa9.09□□□□□ -0.95
PPME1-206ENST00000541340 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
PPME1-206ENST00000541340 DONSONQ9NYP3 566 aa9.09□□□□□ -0.95
PPME1-206ENST00000541340 IBTKQ9P2D0 1353 aaPredicted RBP9.09□□□□□ -0.95
PPME1-206ENST00000541340 PCF11O94913 1555 aaKnown RBP9.08□□□□□ -0.96
PPME1-206ENST00000541340 KIAA2012Q0VF49 1180 aa9.08□□□□□ -0.96
PPME1-206ENST00000541340 TNPO1Q92973 898 aaKnown RBP9.08□□□□□ -0.96
PPME1-206ENST00000541340 PSMD1Q99460 953 aa9.08□□□□□ -0.96
PPME1-206ENST00000541340 PDE3BQ13370 1112 aa9.08□□□□□ -0.96
PPME1-206ENST00000541340 CTR9Q6PD62 1173 aa9.08□□□□□ -0.96
PPME1-206ENST00000541340 BRMS1Q9HCU9 246 aa9.08□□□□□ -0.96
PPME1-206ENST00000541340 SLC26A8Q96RN1 970 aa9.07□□□□□ -0.96
PPME1-206ENST00000541340 RASSF4Q9H2L5 321 aa9.07□□□□□ -0.96
PPME1-206ENST00000541340 TOMM22Q9NS69 142 aa9.07□□□□□ -0.96
PPME1-206ENST00000541340 CCDC39Q9UFE4 941 aa9.07□□□□□ -0.96
PPME1-206ENST00000541340 BRD4O60885 1362 aaPredicted RBP9.07□□□□□ -0.96
PPME1-206ENST00000541340 GYS2P54840 703 aa9.07□□□□□ -0.96
PPME1-206ENST00000541340 HNRNPH2P55795 449 aaKnown RBP9.07□□□□□ -0.96
PPME1-206ENST00000541340 BORCS6Q96GS4 357 aa9.07□□□□□ -0.96
PPME1-206ENST00000541340 TOPBP1Q92547 1522 aa9.07□□□□□ -0.96
PPME1-206ENST00000541340 TNNT1P13805 278 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 CTNNA3Q9UI47 895 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 DDX41Q9UJV9 622 aaKnown RBP9.06□□□□□ -0.96
PPME1-206ENST00000541340 TTC36A6NLP5 189 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 TEX14Q8IWB6 1497 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 FHOD3Q2V2M9 1422 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 PLEKHH1Q9ULM0 1364 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 CCDC189A1A4V9 331 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 SETQ01105 290 aaPredicted RBP9.06□□□□□ -0.96
PPME1-206ENST00000541340 NBPF9Q3BBW0 867 aa9.06□□□□□ -0.96
PPME1-206ENST00000541340 HMGB1P09429 215 aaKnown RBP9.05□□□□□ -0.96
PPME1-206ENST00000541340 PANK1Q8TE04 598 aa9.05□□□□□ -0.96
PPME1-206ENST00000541340 MORC2Q9Y6X9 1032 aaPredicted RBP9.05□□□□□ -0.96
PPME1-206ENST00000541340 KIF15Q9NS87 1388 aa9.05□□□□□ -0.96
PPME1-206ENST00000541340 TDO2P48775 406 aa9.05□□□□□ -0.96
PPME1-206ENST00000541340 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
PPME1-206ENST00000541340 COG6Q9Y2V7 657 aa9.05□□□□□ -0.96
PPME1-206ENST00000541340 NBPF10Q6P3W6 841 aaKnown RBP9.04□□□□□ -0.96
PPME1-206ENST00000541340 ZBTB12Q9Y330 459 aaPredicted RBP9.04□□□□□ -0.96
PPME1-206ENST00000541340 DDIT3P35638 169 aa9.04□□□□□ -0.96
PPME1-206ENST00000541340 C17orf53Q8N3J3 647 aaPredicted RBP9.04□□□□□ -0.96
PPME1-206ENST00000541340 CALR3Q96L12 384 aaKnown RBP9.04□□□□□ -0.96
PPME1-206ENST00000541340 SUFUQ9UMX1 484 aa9.04□□□□□ -0.96
PPME1-206ENST00000541340 ADAMTS8Q9UP79 889 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 927.9 ms