RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 MMP16P51512 607 aa10.09□□□□□ -0.79
SOX9-AS1-214ENST00000540802 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
SOX9-AS1-214ENST00000540802 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
SOX9-AS1-214ENST00000540802 MS4A1P11836 297 aa10.08□□□□□ -0.8
SOX9-AS1-214ENST00000540802 FCF1Q9Y324 198 aaKnown RBP10.08□□□□□ -0.8
SOX9-AS1-214ENST00000540802 FDX1P10109 184 aa10.07□□□□□ -0.8
SOX9-AS1-214ENST00000540802 TRIM67Q6ZTA4 783 aa10.07□□□□□ -0.8
SOX9-AS1-214ENST00000540802 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
SOX9-AS1-214ENST00000540802 NRG2O14511 850 aaPredicted RBP10.06□□□□□ -0.8
SOX9-AS1-214ENST00000540802 DXOO77932 396 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-214ENST00000540802 RPIAP49247 311 aa10.06□□□□□ -0.8
SOX9-AS1-214ENST00000540802 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
SOX9-AS1-214ENST00000540802 SYMPKQ92797 1274 aaKnown RBP10.05□□□□□ -0.8
SOX9-AS1-214ENST00000540802 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
SOX9-AS1-214ENST00000540802 NDUFV2P19404 249 aa10.04□□□□□ -0.8
SOX9-AS1-214ENST00000540802 GJA5P36382 358 aa10.04□□□□□ -0.8
SOX9-AS1-214ENST00000540802 DIXDC1Q155Q3 683 aa10.04□□□□□ -0.8
SOX9-AS1-214ENST00000540802 ZNF697Q5TEC3 545 aa10.03□□□□□ -0.8
SOX9-AS1-214ENST00000540802 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
SOX9-AS1-214ENST00000540802 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
SOX9-AS1-214ENST00000540802 PRR20EP86478 221 aa10.02□□□□□ -0.81
SOX9-AS1-214ENST00000540802 PRR20CP86479 221 aa10.02□□□□□ -0.81
SOX9-AS1-214ENST00000540802 PRR20DP86480 221 aa10.02□□□□□ -0.81
SOX9-AS1-214ENST00000540802 PRR20BP86481 221 aa10.02□□□□□ -0.81
SOX9-AS1-214ENST00000540802 PRR20AP86496 221 aa10.02□□□□□ -0.81
SOX9-AS1-214ENST00000540802 Q6ZNB5 142 aa10.02□□□□□ -0.81
SOX9-AS1-214ENST00000540802 GDF9O60383 454 aa10.01□□□□□ -0.81
SOX9-AS1-214ENST00000540802 CD2BP2O95400 341 aaKnown RBP10.01□□□□□ -0.81
SOX9-AS1-214ENST00000540802 C6orf229H3BNL8 230 aa9.99□□□□□ -0.81
SOX9-AS1-214ENST00000540802 SPTLC1O15269 473 aa9.99□□□□□ -0.81
SOX9-AS1-214ENST00000540802 JUNDP17535 347 aa9.99□□□□□ -0.81
SOX9-AS1-214ENST00000540802 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
SOX9-AS1-214ENST00000540802 LCE2BO14633 110 aa9.98□□□□□ -0.81
SOX9-AS1-214ENST00000540802 PKD2L1Q9P0L9 805 aa9.98□□□□□ -0.81
SOX9-AS1-214ENST00000540802 SPDYE5A6NIY4 337 aa9.97□□□□□ -0.81
SOX9-AS1-214ENST00000540802 ZBTB24O43167 697 aaPredicted RBP9.97□□□□□ -0.81
SOX9-AS1-214ENST00000540802 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
SOX9-AS1-214ENST00000540802 MTMR2Q13614 643 aa9.96□□□□□ -0.82
SOX9-AS1-214ENST00000540802 RIC3Q7Z5B4 369 aa9.96□□□□□ -0.82
SOX9-AS1-214ENST00000540802 TRAF7Q6Q0C0 670 aa9.95□□□□□ -0.82
SOX9-AS1-214ENST00000540802 TRIM32Q13049 653 aa9.94□□□□□ -0.82
SOX9-AS1-214ENST00000540802 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
SOX9-AS1-214ENST00000540802 DESI1Q6ICB0 168 aa9.94□□□□□ -0.82
SOX9-AS1-214ENST00000540802 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
SOX9-AS1-214ENST00000540802 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
SOX9-AS1-214ENST00000540802 PRPF38BQ5VTL8 546 aaKnown RBP9.93□□□□□ -0.82
SOX9-AS1-214ENST00000540802 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
SOX9-AS1-214ENST00000540802 PRR7Q8TB68 274 aa9.93□□□□□ -0.82
SOX9-AS1-214ENST00000540802 FOXC1Q12948 553 aa9.92□□□□□ -0.82
SOX9-AS1-214ENST00000540802 NUDT12Q9BQG2 462 aa9.92□□□□□ -0.82
SOX9-AS1-214ENST00000540802 DGAT1O75907 488 aa9.91□□□□□ -0.82
SOX9-AS1-214ENST00000540802 HRCP23327 699 aa9.91□□□□□ -0.82
SOX9-AS1-214ENST00000540802 LIMD1Q9UGP4 676 aa9.91□□□□□ -0.82
SOX9-AS1-214ENST00000540802 PTPRNQ16849 979 aa9.9□□□□□ -0.82
SOX9-AS1-214ENST00000540802 PTCRAQ6ISU1 281 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-214ENST00000540802 ZBTB3Q9H5J0 574 aa9.9□□□□□ -0.82
SOX9-AS1-214ENST00000540802 EVA1BQ9NVM1 165 aa9.9□□□□□ -0.82
SOX9-AS1-214ENST00000540802 TOR4AQ9NXH8 423 aa9.9□□□□□ -0.82
SOX9-AS1-214ENST00000540802 WNT7AO00755 349 aa9.89□□□□□ -0.83
SOX9-AS1-214ENST00000540802 CCNYL3P0C7X3 344 aa9.89□□□□□ -0.83
SOX9-AS1-214ENST00000540802 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
SOX9-AS1-214ENST00000540802 KDM4CQ9H3R0 1056 aa9.89□□□□□ -0.83
SOX9-AS1-214ENST00000540802 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
SOX9-AS1-214ENST00000540802 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
SOX9-AS1-214ENST00000540802 LILRB3O75022 631 aa9.87□□□□□ -0.83
SOX9-AS1-214ENST00000540802 LYPD8Q6UX82 237 aa9.87□□□□□ -0.83
SOX9-AS1-214ENST00000540802 CABLES1Q8TDN4 633 aa9.87□□□□□ -0.83
SOX9-AS1-214ENST00000540802 WNT7BP56706 349 aa9.86□□□□□ -0.83
SOX9-AS1-214ENST00000540802 SKOR1P84550 965 aa9.86□□□□□ -0.83
SOX9-AS1-214ENST00000540802 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
SOX9-AS1-214ENST00000540802 CLK2P49760 499 aaKnown RBP9.85□□□□□ -0.83
SOX9-AS1-214ENST00000540802 MYT1Q01538 1121 aa9.85□□□□□ -0.83
SOX9-AS1-214ENST00000540802 KCNH2Q12809 1159 aa9.85□□□□□ -0.83
SOX9-AS1-214ENST00000540802 QPCTQ16769 361 aa9.85□□□□□ -0.83
SOX9-AS1-214ENST00000540802 CSPP1Q1MSJ5 1256 aa9.85□□□□□ -0.83
SOX9-AS1-214ENST00000540802 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
SOX9-AS1-214ENST00000540802 FAM187AA6NFU0 413 aa9.84□□□□□ -0.83
SOX9-AS1-214ENST00000540802 CYP4X1Q8N118 509 aa9.84□□□□□ -0.83
SOX9-AS1-214ENST00000540802 MRGPRX2Q96LB1 330 aa9.84□□□□□ -0.83
SOX9-AS1-214ENST00000540802 RC3H1Q5TC82 1133 aaKnown RBP9.83□□□□□ -0.84
SOX9-AS1-214ENST00000540802 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
SOX9-AS1-214ENST00000540802 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
SOX9-AS1-214ENST00000540802 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
SOX9-AS1-214ENST00000540802 SKIV2LQ15477 1246 aaKnown RBP9.82□□□□□ -0.84
SOX9-AS1-214ENST00000540802 RTL5Q5HYW3 569 aaPredicted RBP9.82□□□□□ -0.84
SOX9-AS1-214ENST00000540802 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
SOX9-AS1-214ENST00000540802 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
SOX9-AS1-214ENST00000540802 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
SOX9-AS1-214ENST00000540802 AVPP01185 164 aa9.81□□□□□ -0.84
SOX9-AS1-214ENST00000540802 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
SOX9-AS1-214ENST00000540802 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
SOX9-AS1-214ENST00000540802 UNC93B1Q9H1C4 597 aa9.81□□□□□ -0.84
SOX9-AS1-214ENST00000540802 F12P00748 615 aaPredicted RBP9.8□□□□□ -0.84
SOX9-AS1-214ENST00000540802 SH3D19Q5HYK7 790 aa9.8□□□□□ -0.84
SOX9-AS1-214ENST00000540802 TTC24A2A3L6 582 aaPredicted RBP9.79□□□□□ -0.84
SOX9-AS1-214ENST00000540802 PER1O15534 1290 aaPredicted RBP9.79□□□□□ -0.84
SOX9-AS1-214ENST00000540802 SH3BP2P78314 561 aa9.79□□□□□ -0.84
SOX9-AS1-214ENST00000540802 SIAH2O43255 324 aa9.78□□□□□ -0.84
SOX9-AS1-214ENST00000540802 SMPD1P17405 629 aa9.78□□□□□ -0.84
SOX9-AS1-214ENST00000540802 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms