RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 MORC1Q86VD1 984 aa27.59■■■□□ 2.01
LSM14A-202ENST00000540746 EVC2Q86UK5 1308 aa27.58■■■□□ 2.01
LSM14A-202ENST00000540746 SHPRHQ149N8 1683 aa27.58■■■□□ 2.01
LSM14A-202ENST00000540746 TRMT2AQ8IZ69 625 aaKnown RBP27.58■■■□□ 2
LSM14A-202ENST00000540746 CRBNQ96SW2 442 aa27.58■■■□□ 2
LSM14A-202ENST00000540746 SPINK5Q9NQ38 1064 aaPredicted RBP27.58■■■□□ 2
LSM14A-202ENST00000540746 C20orf194Q5TEA3 1177 aa27.57■■■□□ 2
LSM14A-202ENST00000540746 PUS7Q96PZ0 661 aaKnown RBP27.57■■■□□ 2
LSM14A-202ENST00000540746 TNNT2P45379 298 aaPredicted RBP27.56■■■□□ 2
LSM14A-202ENST00000540746 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
LSM14A-202ENST00000540746 CABP2Q9NPB3 220 aa27.55■■■□□ 2
LSM14A-202ENST00000540746 STK26Q9P289 416 aa27.54■■■□□ 2
LSM14A-202ENST00000540746 CGNL1Q0VF96 1302 aa27.52■■■□□ 2
LSM14A-202ENST00000540746 ANKRD36BQ8N2N9 1353 aa27.52■■■□□ 2
LSM14A-202ENST00000540746 DMRT2Q9Y5R5 561 aa27.52■■■□□ 2
LSM14A-202ENST00000540746 PTPRMP28827 1452 aa27.51■■□□□ 1.99
LSM14A-202ENST00000540746 REREQ9P2R6 1566 aa27.5■■□□□ 1.99
LSM14A-202ENST00000540746 AGLP35573 1532 aa27.47■■□□□ 1.99
LSM14A-202ENST00000540746 NKTRP30414 1462 aaKnown RBP27.46■■□□□ 1.99
LSM14A-202ENST00000540746 MTHFSP49914 203 aa27.46■■□□□ 1.99
LSM14A-202ENST00000540746 CLTCQ00610 1675 aaKnown RBP27.46■■□□□ 1.99
LSM14A-202ENST00000540746 YTHDC2Q9H6S0 1430 aaKnown RBP27.45■■□□□ 1.99
LSM14A-202ENST00000540746 NGEFQ8N5V2 710 aa27.45■■□□□ 1.98
LSM14A-202ENST00000540746 ALKQ9UM73 1620 aa27.44■■□□□ 1.98
LSM14A-202ENST00000540746 E9PSI1 815 aa27.43■■□□□ 1.98
LSM14A-202ENST00000540746 PRAM1Q96QH2 718 aa27.43■■□□□ 1.98
LSM14A-202ENST00000540746 A0A1W2PP64 1363 aa27.43■■□□□ 1.98
LSM14A-202ENST00000540746 WWC1Q8IX03 1113 aa27.42■■□□□ 1.98
LSM14A-202ENST00000540746 NSD2O96028 1365 aa27.42■■□□□ 1.98
LSM14A-202ENST00000540746 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
LSM14A-202ENST00000540746 MINK1Q8N4C8 1332 aaPredicted RBP27.41■■□□□ 1.98
LSM14A-202ENST00000540746 TCERG1O14776 1098 aaKnown RBP27.4■■□□□ 1.98
LSM14A-202ENST00000540746 PPP6R1Q9UPN7 881 aa27.4■■□□□ 1.98
LSM14A-202ENST00000540746 IQSEC2Q5JU85 1478 aa27.4■■□□□ 1.98
LSM14A-202ENST00000540746 ABCC11Q96J66 1382 aa27.39■■□□□ 1.98
LSM14A-202ENST00000540746 RUNDC1Q96C34 613 aa27.39■■□□□ 1.97
LSM14A-202ENST00000540746 NINLQ9Y2I6 1382 aa27.39■■□□□ 1.97
LSM14A-202ENST00000540746 STAG3Q9UJ98 1225 aa27.38■■□□□ 1.97
LSM14A-202ENST00000540746 SPATA31D1Q6ZQQ2 1576 aa27.37■■□□□ 1.97
LSM14A-202ENST00000540746 BCAR3O75815 825 aa27.37■■□□□ 1.97
LSM14A-202ENST00000540746 A2ML1A8K2U0 1454 aa27.37■■□□□ 1.97
LSM14A-202ENST00000540746 POGKQ9P215 609 aa27.36■■□□□ 1.97
LSM14A-202ENST00000540746 RRP7AQ9Y3A4 280 aaKnown RBP27.36■■□□□ 1.97
LSM14A-202ENST00000540746 CD163L1Q9NR16 1453 aa27.36■■□□□ 1.97
LSM14A-202ENST00000540746 SKAP1Q86WV1 359 aa27.36■■□□□ 1.97
LSM14A-202ENST00000540746 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.36■■□□□ 1.97
LSM14A-202ENST00000540746 TCP11L2Q8N4U5 519 aa27.35■■□□□ 1.97
LSM14A-202ENST00000540746 NEUROD2Q15784 382 aa27.35■■□□□ 1.97
LSM14A-202ENST00000540746 CFAP53Q96M91 514 aa27.35■■□□□ 1.97
LSM14A-202ENST00000540746 ATAD2Q6PL18 1390 aa27.34■■□□□ 1.97
LSM14A-202ENST00000540746 KDM2BQ8NHM5 1336 aa27.34■■□□□ 1.97
LSM14A-202ENST00000540746 MLECQ14165 292 aa27.34■■□□□ 1.97
LSM14A-202ENST00000540746 PHF23Q9BUL5 403 aaPredicted RBP27.34■■□□□ 1.97
LSM14A-202ENST00000540746 ARHGEF40Q8TER5 1519 aa27.32■■□□□ 1.96
LSM14A-202ENST00000540746 GGNBP2Q9H3C7 697 aa27.32■■□□□ 1.96
LSM14A-202ENST00000540746 KIF13AQ9H1H9 1805 aa27.31■■□□□ 1.96
LSM14A-202ENST00000540746 SETD1AO15047 1707 aaKnown RBP27.31■■□□□ 1.96
LSM14A-202ENST00000540746 MS4A1P11836 297 aa27.3■■□□□ 1.96
LSM14A-202ENST00000540746 NLRP1Q9C000 1473 aa27.3■■□□□ 1.96
LSM14A-202ENST00000540746 RIMS2Q9UQ26 1411 aa27.29■■□□□ 1.96
LSM14A-202ENST00000540746 PDE4AP27815 886 aa27.29■■□□□ 1.96
LSM14A-202ENST00000540746 CDK19Q9BWU1 502 aa27.29■■□□□ 1.96
LSM14A-202ENST00000540746 FYB1O15117 783 aa27.28■■□□□ 1.96
LSM14A-202ENST00000540746 ERICH6Q7L0X2 663 aa27.28■■□□□ 1.96
LSM14A-202ENST00000540746 TERF2IPQ9NYB0 399 aa27.28■■□□□ 1.96
LSM14A-202ENST00000540746 ANKRD26Q9UPS8 1709 aa27.28■■□□□ 1.96
LSM14A-202ENST00000540746 U2AF1L5P0DN76 240 aaPredicted RBP27.26■■□□□ 1.95
LSM14A-202ENST00000540746 U2AF1Q01081 240 aaKnown RBP eCLIP27.26■■□□□ 1.95
LSM14A-202ENST00000540746 BACH2Q9BYV9 841 aa27.26■■□□□ 1.95
LSM14A-202ENST00000540746 ANP32AP39687 249 aaKnown RBP27.25■■□□□ 1.95
LSM14A-202ENST00000540746 WAPLQ7Z5K2 1190 aa27.25■■□□□ 1.95
LSM14A-202ENST00000540746 MED14O60244 1454 aa27.24■■□□□ 1.95
LSM14A-202ENST00000540746 COL3A1P02461 1466 aaPredicted RBP27.24■■□□□ 1.95
LSM14A-202ENST00000540746 DLC1Q96QB1 1528 aa27.24■■□□□ 1.95
LSM14A-202ENST00000540746 CCDC27Q2M243 656 aa27.24■■□□□ 1.95
LSM14A-202ENST00000540746 CENPQQ7L2Z9 268 aaPredicted RBP27.24■■□□□ 1.95
LSM14A-202ENST00000540746 CABP1Q9NZU7 370 aa27.24■■□□□ 1.95
LSM14A-202ENST00000540746 ADGRB2O60241 1585 aa27.23■■□□□ 1.95
LSM14A-202ENST00000540746 WDR63Q8IWG1 891 aa27.23■■□□□ 1.95
LSM14A-202ENST00000540746 PAK3O75914 559 aaPredicted RBP27.22■■□□□ 1.95
LSM14A-202ENST00000540746 NRXN3Q9Y4C0 1643 aa27.22■■□□□ 1.95
LSM14A-202ENST00000540746 IPO9Q96P70 1041 aaKnown RBP27.22■■□□□ 1.95
LSM14A-202ENST00000540746 NOP58Q9Y2X3 529 aaKnown RBP27.22■■□□□ 1.95
LSM14A-202ENST00000540746 HDGFL2Q7Z4V5 671 aaPredicted RBP27.19■■□□□ 1.94
LSM14A-202ENST00000540746 ZMYM3Q14202 1370 aa27.18■■□□□ 1.94
LSM14A-202ENST00000540746 KIF20BQ96Q89 1820 aa27.18■■□□□ 1.94
LSM14A-202ENST00000540746 PDE3AQ14432 1141 aa27.17■■□□□ 1.94
LSM14A-202ENST00000540746 NCBP3Q53F19 620 aaKnown RBP27.17■■□□□ 1.94
LSM14A-202ENST00000540746 PLEKHF1Q96S99 279 aa27.17■■□□□ 1.94
LSM14A-202ENST00000540746 RARSP54136 660 aaKnown RBP27.16■■□□□ 1.94
LSM14A-202ENST00000540746 U2SURPO15042 1029 aaKnown RBP27.15■■□□□ 1.94
LSM14A-202ENST00000540746 METP08581 1390 aa27.15■■□□□ 1.94
LSM14A-202ENST00000540746 PANK1Q8TE04 598 aa27.14■■□□□ 1.94
LSM14A-202ENST00000540746 NPM2Q86SE8 214 aaKnown RBP27.12■■□□□ 1.93
LSM14A-202ENST00000540746 PNPLA6Q8IY17 1366 aa27.12■■□□□ 1.93
LSM14A-202ENST00000540746 ATP7BP35670 1465 aa27.11■■□□□ 1.93
LSM14A-202ENST00000540746 FRAT1Q92837 279 aaPredicted RBP27.1■■□□□ 1.93
LSM14A-202ENST00000540746 ESF1Q9H501 851 aaKnown RBP27.1■■□□□ 1.93
LSM14A-202ENST00000540746 COG6Q9Y2V7 657 aa27.1■■□□□ 1.93
LSM14A-202ENST00000540746 CANXP27824 592 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 199.3 ms