RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 REREQ9P2R6 1566 aa15.2■□□□□ 0.02
C11orf54-214ENST00000540113 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
C11orf54-214ENST00000540113 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
C11orf54-214ENST00000540113 DUSP27Q5VZP5 1158 aa15.19■□□□□ 0.02
C11orf54-214ENST00000540113 APAF1O14727 1248 aa15.18■□□□□ 0.02
C11orf54-214ENST00000540113 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
C11orf54-214ENST00000540113 NSD3Q9BZ95 1437 aa15.18■□□□□ 0.02
C11orf54-214ENST00000540113 SLC52A1Q9NWF4 448 aa15.17■□□□□ 0.02
C11orf54-214ENST00000540113 AGLP35573 1532 aa15.17■□□□□ 0.02
C11orf54-214ENST00000540113 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
C11orf54-214ENST00000540113 SLC12A5Q9H2X9 1139 aa15.17■□□□□ 0.02
C11orf54-214ENST00000540113 USP32Q8NFA0 1604 aa15.16■□□□□ 0.02
C11orf54-214ENST00000540113 GOLGA2Q08379 1002 aa15.16■□□□□ 0.02
C11orf54-214ENST00000540113 FBXO31Q5XUX0 539 aaPredicted RBP15.16■□□□□ 0.02
C11orf54-214ENST00000540113 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
C11orf54-214ENST00000540113 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
C11orf54-214ENST00000540113 CLTCQ00610 1675 aaKnown RBP15.15■□□□□ 0.02
C11orf54-214ENST00000540113 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
C11orf54-214ENST00000540113 NOP58Q9Y2X3 529 aaKnown RBP15.15■□□□□ 0.02
C11orf54-214ENST00000540113 SHPRHQ149N8 1683 aa15.14■□□□□ 0.01
C11orf54-214ENST00000540113 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
C11orf54-214ENST00000540113 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
C11orf54-214ENST00000540113 ARHGEF40Q8TER5 1519 aa15.12■□□□□ 0.01
C11orf54-214ENST00000540113 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
C11orf54-214ENST00000540113 PTPRMP28827 1452 aa15.12■□□□□ 0.01
C11orf54-214ENST00000540113 PDE4AP27815 886 aa15.11■□□□□ 0.01
C11orf54-214ENST00000540113 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
C11orf54-214ENST00000540113 POLR3AO14802 1390 aaPredicted RBP15.11■□□□□ 0.01
C11orf54-214ENST00000540113 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
C11orf54-214ENST00000540113 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
C11orf54-214ENST00000540113 NBR1Q14596 966 aa15.1■□□□□ 0.01
C11orf54-214ENST00000540113 MORC1Q86VD1 984 aa15.1■□□□□ 0.01
C11orf54-214ENST00000540113 BCAR3O75815 825 aa15.09■□□□□ 0.01
C11orf54-214ENST00000540113 IPO9Q96P70 1041 aaKnown RBP15.09■□□□□ 0.01
C11orf54-214ENST00000540113 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
C11orf54-214ENST00000540113 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
C11orf54-214ENST00000540113 RRP7AQ9Y3A4 280 aaKnown RBP15.09■□□□□ 0.01
C11orf54-214ENST00000540113 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
C11orf54-214ENST00000540113 SPATA31D1Q6ZQQ2 1576 aa15.09■□□□□ 0.01
C11orf54-214ENST00000540113 CABP2Q9NPB3 220 aa15.09■□□□□ 0.01
C11orf54-214ENST00000540113 STK26Q9P289 416 aa15.09■□□□□ 0.01
C11orf54-214ENST00000540113 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0.01
C11orf54-214ENST00000540113 YTHDC2Q9H6S0 1430 aaKnown RBP15.08■□□□□ 0
C11orf54-214ENST00000540113 TRMT2AQ8IZ69 625 aaKnown RBP15.06■□□□□ 0
C11orf54-214ENST00000540113 A2ML1A8K2U0 1454 aa15.06■□□□□ 0
C11orf54-214ENST00000540113 SETD1AO15047 1707 aaKnown RBP15.06■□□□□ 0
C11orf54-214ENST00000540113 BACH2Q9BYV9 841 aa15.06■□□□□ 0
C11orf54-214ENST00000540113 TRHP20396 242 aaPredicted RBP15.05■□□□□ 0
C11orf54-214ENST00000540113 CGNL1Q0VF96 1302 aa15.05■□□□□ 0
C11orf54-214ENST00000540113 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
C11orf54-214ENST00000540113 A0A1W2PP64 1363 aa15.04■□□□□ -0
C11orf54-214ENST00000540113 MTHFSP49914 203 aa15.04■□□□□ -0
C11orf54-214ENST00000540113 MLECQ14165 292 aa15.03■□□□□ -0
C11orf54-214ENST00000540113 PRAM1Q96QH2 718 aa15.03■□□□□ -0
C11orf54-214ENST00000540113 MINK1Q8N4C8 1332 aaPredicted RBP15.03■□□□□ -0
C11orf54-214ENST00000540113 WWC1Q8IX03 1113 aa15.03■□□□□ -0
C11orf54-214ENST00000540113 KDM2BQ8NHM5 1336 aa15.03■□□□□ -0
C11orf54-214ENST00000540113 NKTRP30414 1462 aaKnown RBP15.03■□□□□ -0
C11orf54-214ENST00000540113 IQSEC2Q5JU85 1478 aa15.03■□□□□ -0
C11orf54-214ENST00000540113 CD163L1Q9NR16 1453 aa15.03■□□□□ -0
C11orf54-214ENST00000540113 NSD2O96028 1365 aa15.02■□□□□ -0
C11orf54-214ENST00000540113 E9PSI1 815 aa15.02□□□□□ -0.01
C11orf54-214ENST00000540113 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02□□□□□ -0.01
C11orf54-214ENST00000540113 RIMS2Q9UQ26 1411 aa15.01□□□□□ -0.01
C11orf54-214ENST00000540113 ABCC11Q96J66 1382 aa15.01□□□□□ -0.01
C11orf54-214ENST00000540113 NRXN3Q9Y4C0 1643 aa15.01□□□□□ -0.01
C11orf54-214ENST00000540113 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
C11orf54-214ENST00000540113 MS4A1P11836 297 aa15.01□□□□□ -0.01
C11orf54-214ENST00000540113 SRPK2P78362 688 aaKnown RBP15.01□□□□□ -0.01
C11orf54-214ENST00000540113 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
C11orf54-214ENST00000540113 ANKRD26Q9UPS8 1709 aa15□□□□□ -0.01
C11orf54-214ENST00000540113 TCP11L2Q8N4U5 519 aa15□□□□□ -0.01
C11orf54-214ENST00000540113 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
C11orf54-214ENST00000540113 RGS3P49796 1198 aa14.99□□□□□ -0.01
C11orf54-214ENST00000540113 POGKQ9P215 609 aa14.99□□□□□ -0.01
C11orf54-214ENST00000540113 DLC1Q96QB1 1528 aa14.99□□□□□ -0.01
C11orf54-214ENST00000540113 NLRP1Q9C000 1473 aa14.99□□□□□ -0.01
C11orf54-214ENST00000540113 PANK1Q8TE04 598 aa14.98□□□□□ -0.01
C11orf54-214ENST00000540113 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
C11orf54-214ENST00000540113 NGEFQ8N5V2 710 aa14.97□□□□□ -0.01
C11orf54-214ENST00000540113 FRAT1Q92837 279 aaPredicted RBP14.97□□□□□ -0.01
C11orf54-214ENST00000540113 RUNDC1Q96C34 613 aa14.97□□□□□ -0.01
C11orf54-214ENST00000540113 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
C11orf54-214ENST00000540113 CANXP27824 592 aaKnown RBP14.96□□□□□ -0.01
C11orf54-214ENST00000540113 BCL2L13Q9BXK5 485 aa14.96□□□□□ -0.01
C11orf54-214ENST00000540113 ESF1Q9H501 851 aaKnown RBP14.96□□□□□ -0.01
C11orf54-214ENST00000540113 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
C11orf54-214ENST00000540113 COG6Q9Y2V7 657 aa14.96□□□□□ -0.01
C11orf54-214ENST00000540113 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.02
C11orf54-214ENST00000540113 KIF20BQ96Q89 1820 aa14.95□□□□□ -0.02
C11orf54-214ENST00000540113 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
C11orf54-214ENST00000540113 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.02
C11orf54-214ENST00000540113 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
C11orf54-214ENST00000540113 LAS1LQ9Y4W2 734 aaKnown RBP14.95□□□□□ -0.02
C11orf54-214ENST00000540113 ZMYM3Q14202 1370 aa14.95□□□□□ -0.02
C11orf54-214ENST00000540113 IGHDP01880 384 aa14.95□□□□□ -0.02
C11orf54-214ENST00000540113 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
C11orf54-214ENST00000540113 MED14O60244 1454 aa14.94□□□□□ -0.02
C11orf54-214ENST00000540113 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
C11orf54-214ENST00000540113 FYB1O15117 783 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms