RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 NPATQ14207 1427 aa13.61□□□□□ -0.23
MDH1-215ENST00000539945 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
MDH1-215ENST00000539945 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
MDH1-215ENST00000539945 KDM2AQ9Y2K7 1162 aa13.61□□□□□ -0.23
MDH1-215ENST00000539945 CAMSAP1Q5T5Y3 1602 aa13.61□□□□□ -0.23
MDH1-215ENST00000539945 ARHGAP31Q2M1Z3 1444 aa13.6□□□□□ -0.23
MDH1-215ENST00000539945 PRAG1Q86YV5 1406 aa13.6□□□□□ -0.23
MDH1-215ENST00000539945 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
MDH1-215ENST00000539945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.236e-10■■□□□ 12.5
MDH1-215ENST00000539945 CNTLNQ9NXG0 1405 aa13.59□□□□□ -0.23
MDH1-215ENST00000539945 ARHGEF40Q8TER5 1519 aa13.58□□□□□ -0.23
MDH1-215ENST00000539945 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
MDH1-215ENST00000539945 TRPM1Q7Z4N2 1603 aa13.56□□□□□ -0.24
MDH1-215ENST00000539945 NOS1P29475 1434 aa13.56□□□□□ -0.24
MDH1-215ENST00000539945 USP47Q96K76 1375 aa13.56□□□□□ -0.24
MDH1-215ENST00000539945 G3V3G9 751 aa13.56□□□□□ -0.24
MDH1-215ENST00000539945 KIF1BO60333 1816 aa13.55□□□□□ -0.24
MDH1-215ENST00000539945 UGGT1Q9NYU2 1555 aa13.55□□□□□ -0.24
MDH1-215ENST00000539945 PSEN1P49768 467 aa13.55□□□□□ -0.24
MDH1-215ENST00000539945 DDX10Q13206 875 aaKnown RBP13.55□□□□□ -0.24
MDH1-215ENST00000539945 GPRASP1Q5JY77 1395 aa13.54□□□□□ -0.24
MDH1-215ENST00000539945 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
MDH1-215ENST00000539945 ROCK2O75116 1388 aaKnown RBP13.53□□□□□ -0.24
MDH1-215ENST00000539945 SIGLEC1Q9BZZ2 1709 aa13.53□□□□□ -0.24
MDH1-215ENST00000539945 LAMC1P11047 1609 aa13.53□□□□□ -0.24
MDH1-215ENST00000539945 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
MDH1-215ENST00000539945 ADGRB3O60242 1522 aa13.52□□□□□ -0.24
MDH1-215ENST00000539945 MADDQ8WXG6 1647 aa13.52□□□□□ -0.24
MDH1-215ENST00000539945 HS3ST6Q96QI5 342 aa13.52□□□□□ -0.25
MDH1-215ENST00000539945 PIK3C2BO00750 1634 aa13.51□□□□□ -0.25
MDH1-215ENST00000539945 CFAP65Q6ZU64 1925 aaKnown RBP13.51□□□□□ -0.25
MDH1-215ENST00000539945 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
MDH1-215ENST00000539945 SYNMO15061 1565 aa13.51□□□□□ -0.25
MDH1-215ENST00000539945 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
MDH1-215ENST00000539945 MYOM2P54296 1465 aa13.5□□□□□ -0.25
MDH1-215ENST00000539945 VASPP50552 380 aaPredicted RBP13.5□□□□□ -0.25
MDH1-215ENST00000539945 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
MDH1-215ENST00000539945 C11orf95C9JLR9 678 aaPredicted RBP13.49□□□□□ -0.25
MDH1-215ENST00000539945 SLC52A1Q9NWF4 448 aa13.49□□□□□ -0.25
MDH1-215ENST00000539945 MROH2AA6NES4 1674 aa13.49□□□□□ -0.25
MDH1-215ENST00000539945 IFT172Q9UG01 1749 aa13.49□□□□□ -0.25
MDH1-215ENST00000539945 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
MDH1-215ENST00000539945 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
MDH1-215ENST00000539945 NBPF1Q3BBV0 1214 aa13.48□□□□□ -0.25
MDH1-215ENST00000539945 ARID4BQ4LE39 1312 aaPredicted RBP13.48□□□□□ -0.25
MDH1-215ENST00000539945 RPGRIP1LQ68CZ1 1315 aa13.48□□□□□ -0.25
MDH1-215ENST00000539945 NRXN1Q9ULB1 1477 aa13.47□□□□□ -0.25
MDH1-215ENST00000539945 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
MDH1-215ENST00000539945 CLTCQ00610 1675 aaKnown RBP13.46□□□□□ -0.25
MDH1-215ENST00000539945 ERVK-7P63135 1459 aa13.46□□□□□ -0.26
MDH1-215ENST00000539945 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.26
MDH1-215ENST00000539945 ST20-MTHFSA0A0A6YYL1 179 aa13.46□□□□□ -0.26
MDH1-215ENST00000539945 IDI1Q13907 227 aa13.45□□□□□ -0.26
MDH1-215ENST00000539945 PPLO60437 1756 aa13.45□□□□□ -0.26
MDH1-215ENST00000539945 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
MDH1-215ENST00000539945 MLECQ14165 292 aa13.44□□□□□ -0.26
MDH1-215ENST00000539945 KRTAP3-3Q9BYR6 98 aa13.44□□□□□ -0.26
MDH1-215ENST00000539945 KRTAP3-2Q9BYR7 98 aa13.44□□□□□ -0.26
MDH1-215ENST00000539945 ADGRF5Q8IZF2 1346 aa13.43□□□□□ -0.26
MDH1-215ENST00000539945 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
MDH1-215ENST00000539945 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
MDH1-215ENST00000539945 SPATA31D1Q6ZQQ2 1576 aa13.43□□□□□ -0.26
MDH1-215ENST00000539945 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
MDH1-215ENST00000539945 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
MDH1-215ENST00000539945 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
MDH1-215ENST00000539945 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
MDH1-215ENST00000539945 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
MDH1-215ENST00000539945 SCAF11Q99590 1463 aaKnown RBP13.4□□□□□ -0.26
MDH1-215ENST00000539945 ANP32CO43423 234 aa13.4□□□□□ -0.26
MDH1-215ENST00000539945 PIK3C2GO75747 1445 aa13.4□□□□□ -0.26
MDH1-215ENST00000539945 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
MDH1-215ENST00000539945 ZMYM3Q14202 1370 aa13.4□□□□□ -0.26
MDH1-215ENST00000539945 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
MDH1-215ENST00000539945 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
MDH1-215ENST00000539945 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
MDH1-215ENST00000539945 TESK2Q96S53 571 aa13.39□□□□□ -0.27
MDH1-215ENST00000539945 SETBP1Q9Y6X0 1596 aa13.39□□□□□ -0.27
MDH1-215ENST00000539945 DOK7Q18PE1 504 aa13.38□□□□□ -0.27
MDH1-215ENST00000539945 C14orf93Q9H972 538 aaKnown RBP13.38□□□□□ -0.27
MDH1-215ENST00000539945 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
MDH1-215ENST00000539945 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
MDH1-215ENST00000539945 CCER2I3L3R5 266 aa13.37□□□□□ -0.27
MDH1-215ENST00000539945 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
MDH1-215ENST00000539945 EIF3AQ14152 1382 aaKnown RBP13.37□□□□□ -0.27
MDH1-215ENST00000539945 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
MDH1-215ENST00000539945 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
MDH1-215ENST00000539945 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
MDH1-215ENST00000539945 ADGRB1O14514 1584 aa13.33□□□□□ -0.27
MDH1-215ENST00000539945 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.27
MDH1-215ENST00000539945 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
MDH1-215ENST00000539945 TMF1P82094 1093 aa13.33□□□□□ -0.28
MDH1-215ENST00000539945 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
MDH1-215ENST00000539945 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
MDH1-215ENST00000539945 ERBB3P21860 1342 aa13.32□□□□□ -0.28
MDH1-215ENST00000539945 TNRQ92752 1358 aa13.32□□□□□ -0.28
MDH1-215ENST00000539945 HOXB3P14651 431 aaPredicted RBP13.31□□□□□ -0.28
MDH1-215ENST00000539945 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
MDH1-215ENST00000539945 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
MDH1-215ENST00000539945 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
MDH1-215ENST00000539945 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms