RNA–Protein interactions for RNA: ENST00000539770.5

ARL6IP4-216, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 1 (best)

Gene ARL6IP4, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-216	ENST00000539770	PLEKHH1	Q9ULM0	1364 aa		32.34	■■■□□ 2.77
ARL6IP4-216	ENST00000539770	C1orf167	Q5SNV9	1468 aa		32.34	■■■□□ 2.77
ARL6IP4-216	ENST00000539770	WAPL	Q7Z5K2	1190 aa		32.33	■■■□□ 2.77
ARL6IP4-216	ENST00000539770	DLC1	Q96QB1	1528 aa		32.32	■■■□□ 2.76
ARL6IP4-216	ENST00000539770	SIRT1	Q96EB6	747 aa		32.31	■■■□□ 2.76
ARL6IP4-216	ENST00000539770	NHSL1	Q5SYE7	1610 aa		32.28	■■■□□ 2.76
ARL6IP4-216	ENST00000539770	JCAD	Q9P266	1359 aa		32.25	■■■□□ 2.75
ARL6IP4-216	ENST00000539770	POTEA	Q6S8J7	498 aa		32.25	■■■□□ 2.75
ARL6IP4-216	ENST00000539770	KIAA1210	Q9ULL0	1709 aa		32.24	■■■□□ 2.75
ARL6IP4-216	ENST00000539770	PRAM1	Q96QH2	718 aa		32.23	■■■□□ 2.75
ARL6IP4-216	ENST00000539770	SIN3A	Q96ST3	1273 aa		32.23	■■■□□ 2.75
ARL6IP4-216	ENST00000539770	FMN2	Q9NZ56	1722 aa		32.2	■■■□□ 2.75
ARL6IP4-216	ENST00000539770	TRAK1	Q9UPV9	953 aa		32.19	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	ADGRB2	O60241	1585 aa		32.17	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	NEUROD1	Q13562	356 aa		32.17	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	L3MBTL2	Q969R5	705 aa		32.17	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	ORAI2	Q96SN7	254 aa		32.17	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	POGK	Q9P215	609 aa		32.17	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	SHPRH	Q149N8	1683 aa		32.17	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.16	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.15	■■■□□ 2.74
ARL6IP4-216	ENST00000539770	DDX17	Q92841	729 aa	Known RBP	32.13	■■■□□ 2.73
ARL6IP4-216	ENST00000539770	NUTM2F	A1L443	756 aa		32.1	■■■□□ 2.73
ARL6IP4-216	ENST00000539770	ESCO1	Q5FWF5	840 aa		32.1	■■■□□ 2.73
ARL6IP4-216	ENST00000539770	SPATA31A6	Q5VVP1	1343 aa		32.09	■■■□□ 2.73
ARL6IP4-216	ENST00000539770	KIF1A	Q12756	1690 aa		32.07	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	LRRC59	Q96AG4	307 aa	Known RBP	32.06	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	SOS2	Q07890	1332 aa	Predicted RBP	32.05	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	NBPF1	Q3BBV0	1214 aa		32.05	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	LRP6	O75581	1613 aa		32.04	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	NPHP3	Q7Z494	1330 aa		32.04	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.04	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	ANKAR	Q7Z5J8	1434 aa		32.04	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	TRPM1	Q7Z4N2	1603 aa		32.04	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.02	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	EIF3A	Q14152	1382 aa	Known RBP	32.02	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	PNPLA6	Q8IY17	1366 aa		32.02	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	PXDN	Q92626	1479 aa		32.02	■■■□□ 2.72
ARL6IP4-216	ENST00000539770	USP32	Q8NFA0	1604 aa		32	■■■□□ 2.71
ARL6IP4-216	ENST00000539770	TONSL	Q96HA7	1378 aa		32	■■■□□ 2.71
ARL6IP4-216	ENST00000539770	TULP4	Q9NRJ4	1543 aa		32	■■■□□ 2.71
ARL6IP4-216	ENST00000539770	FOXO3	O43524	673 aa		31.97	■■■□□ 2.71
ARL6IP4-216	ENST00000539770	RGPD8	O14715	1765 aa	Predicted RBP	31.96	■■■□□ 2.71
ARL6IP4-216	ENST00000539770	WASL	O00401	505 aa	Predicted RBP	31.95	■■■□□ 2.71
ARL6IP4-216	ENST00000539770	PHF8	Q9UPP1	1060 aa		31.94	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	ROCK2	O75116	1388 aa	Known RBP	31.94	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	PCGF6	Q9BYE7	350 aa		31.93	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	XPC	Q01831	940 aa	Predicted RBP	31.92	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	MEX3C	Q5U5Q3	659 aa	Known RBP	31.92	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.91	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.9	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	NUTM2E	B1AL46	878 aa	Predicted RBP	31.9	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.9	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	PRR36	Q9H6K5	1346 aa		31.9	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	ZNF772	Q68DY9	489 aa	Predicted RBP	31.89	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.89	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	ATP7B	P35670	1465 aa		31.89	■■■□□ 2.7
ARL6IP4-216	ENST00000539770	NBPF8	Q3BBV2	869 aa		31.88	■■■□□ 2.69
ARL6IP4-216	ENST00000539770	QRICH2	Q9H0J4	1663 aa		31.87	■■■□□ 2.69
ARL6IP4-216	ENST00000539770	GPRASP1	Q5JY77	1395 aa		31.86	■■■□□ 2.69
ARL6IP4-216	ENST00000539770	RALGAPB	Q86X10	1494 aa		31.85	■■■□□ 2.69
ARL6IP4-216	ENST00000539770	ITSN1	Q15811	1721 aa		31.85	■■■□□ 2.69
ARL6IP4-216	ENST00000539770	KRT28	Q7Z3Y7	464 aa		31.83	■■■□□ 2.69
ARL6IP4-216	ENST00000539770	PMFBP1	Q8TBY8	1022 aa		31.83	■■■□□ 2.69
ARL6IP4-216	ENST00000539770	TNS3	Q68CZ2	1445 aa		31.82	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	SPATA31A3	Q5VYP0	1347 aa		31.81	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.81	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	TOPAZ1	Q8N9V7	1692 aa		31.8	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.8	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	CDK19	Q9BWU1	502 aa		31.8	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	PSME1	Q06323	249 aa		31.79	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	SBNO1	A3KN83	1393 aa		31.79	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	NUDT16	Q96DE0	195 aa	Known RBP	31.78	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	CLSPN	Q9HAW4	1339 aa		31.76	■■■□□ 2.68
ARL6IP4-216	ENST00000539770	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.75	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	ADAMTS2	O95450	1211 aa		31.73	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	C8orf37	Q96NL8	207 aa		31.73	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	CARD11	Q9BXL7	1154 aa		31.73	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	ARHGEF10	O15013	1369 aa		31.72	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	NGDN	Q8NEJ9	315 aa	Known RBP	31.72	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	AFF2	P51816	1311 aa		31.72	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	SRPK2	P78362	688 aa	Known RBP	31.71	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	CCDC61	Q9Y6R9	512 aa		31.7	■■■□□ 2.67
ARL6IP4-216	ENST00000539770	RXRB	P28702	533 aa		31.69	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	POLR3A	O14802	1390 aa	Predicted RBP	31.68	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	ALS2	Q96Q42	1657 aa		31.67	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	CABP2	Q9NPB3	220 aa		31.66	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	EVC2	Q86UK5	1308 aa		31.66	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	SBNO2	Q9Y2G9	1366 aa		31.66	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	ABCA3	Q99758	1704 aa		31.65	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	MARF1	Q9Y4F3	1742 aa	Known RBP	31.65	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	PPIP5K1	Q6PFW1	1433 aa		31.65	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	LMOD2	Q6P5Q4	547 aa		31.64	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	NGLY1	Q96IV0	654 aa		31.64	■■■□□ 2.66
ARL6IP4-216	ENST00000539770	PLEKHG3	A1L390	1219 aa		31.63	■■■□□ 2.65
ARL6IP4-216	ENST00000539770	ACE	P12821	1306 aa		31.61	■■■□□ 2.65
ARL6IP4-216	ENST00000539770	TIMELESS	Q9UNS1	1208 aa		31.6	■■■□□ 2.65
ARL6IP4-216	ENST00000539770	SRCAP	Q6ZRS2	3230 aa		31.6	■■■□□ 2.65
ARL6IP4-216	ENST00000539770	HAP1	P54257	671 aa	Predicted RBP	31.58	■■■□□ 2.65
ARL6IP4-216	ENST00000539770	PAK3	O75914	559 aa	Predicted RBP	31.57	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms