RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 LSM11P83369 360 aaKnown RBP eCLIP11.07□□□□□ -0.641e-6■□□□□ 9.9
SNHG1-205ENST00000537869 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
SNHG1-205ENST00000537869 C6orf229H3BNL8 230 aa11.06□□□□□ -0.64
SNHG1-205ENST00000537869 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
SNHG1-205ENST00000537869 TBC1D2BQ9UPU7 963 aa11.06□□□□□ -0.64
SNHG1-205ENST00000537869 ABL2P42684 1182 aa11.05□□□□□ -0.64
SNHG1-205ENST00000537869 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
SNHG1-205ENST00000537869 LCE2DQ5TA82 110 aaPredicted RBP11.05□□□□□ -0.64
SNHG1-205ENST00000537869 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
SNHG1-205ENST00000537869 HRO43593 1189 aa11.04□□□□□ -0.64
SNHG1-205ENST00000537869 TSC1Q92574 1164 aa11.04□□□□□ -0.64
SNHG1-205ENST00000537869 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
SNHG1-205ENST00000537869 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
SNHG1-205ENST00000537869 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
SNHG1-205ENST00000537869 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
SNHG1-205ENST00000537869 HMX1Q9NP08 348 aaPredicted RBP11.03□□□□□ -0.64
SNHG1-205ENST00000537869 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
SNHG1-205ENST00000537869 MORN1Q5T089 497 aa11.02□□□□□ -0.65
SNHG1-205ENST00000537869 ACTN4O43707 911 aaKnown RBP11.01□□□□□ -0.65
SNHG1-205ENST00000537869 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
SNHG1-205ENST00000537869 HELBQ8NG08 1087 aaPredicted RBP11.01□□□□□ -0.65
SNHG1-205ENST00000537869 LRRN4Q8WUT4 740 aa11.01□□□□□ -0.65
SNHG1-205ENST00000537869 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
SNHG1-205ENST00000537869 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
SNHG1-205ENST00000537869 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
SNHG1-205ENST00000537869 PRR7Q8TB68 274 aa10.99□□□□□ -0.65
SNHG1-205ENST00000537869 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
SNHG1-205ENST00000537869 STAC3Q96MF2 364 aa10.99□□□□□ -0.65
SNHG1-205ENST00000537869 GOLGA8CPA6NN73 597 aa10.98□□□□□ -0.65
SNHG1-205ENST00000537869 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
SNHG1-205ENST00000537869 NDUFB9Q9Y6M9 179 aa10.98□□□□□ -0.65
SNHG1-205ENST00000537869 POM121CA8CG34 1229 aa10.97□□□□□ -0.65
SNHG1-205ENST00000537869 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
SNHG1-205ENST00000537869 CCDC97Q96F63 343 aaPredicted RBP10.97□□□□□ -0.65
SNHG1-205ENST00000537869 SERPINA10Q9UK55 444 aa10.97□□□□□ -0.65
SNHG1-205ENST00000537869 SOWAHBA6NEL2 793 aa10.96□□□□□ -0.65
SNHG1-205ENST00000537869 BCAMP50895 628 aa10.96□□□□□ -0.65
SNHG1-205ENST00000537869 PPP4CP60510 307 aa10.96□□□□□ -0.65
SNHG1-205ENST00000537869 IRF5Q13568 498 aa10.96□□□□□ -0.65
SNHG1-205ENST00000537869 EPS8L1Q8TE68 723 aa10.96□□□□□ -0.65
SNHG1-205ENST00000537869 HPS5Q9UPZ3 1129 aa10.96□□□□□ -0.65
SNHG1-205ENST00000537869 PER1O15534 1290 aaPredicted RBP10.95□□□□□ -0.66
SNHG1-205ENST00000537869 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
SNHG1-205ENST00000537869 GPR37L1O60883 481 aa10.94□□□□□ -0.66
SNHG1-205ENST00000537869 APLP1P51693 650 aa10.94□□□□□ -0.66
SNHG1-205ENST00000537869 Q3C1V9 767 aa10.94□□□□□ -0.66
SNHG1-205ENST00000537869 PRR14Q9BWN1 585 aa10.94□□□□□ -0.66
SNHG1-205ENST00000537869 BLOC1S3Q6QNY0 202 aa10.93□□□□□ -0.66
SNHG1-205ENST00000537869 RNF19BQ6ZMZ0 732 aa10.93□□□□□ -0.66
SNHG1-205ENST00000537869 WNT2BQ93097 391 aa10.92□□□□□ -0.66
SNHG1-205ENST00000537869 CALR3Q96L12 384 aaKnown RBP10.92□□□□□ -0.66
SNHG1-205ENST00000537869 TSR3Q9UJK0 312 aaKnown RBP10.92□□□□□ -0.66
SNHG1-205ENST00000537869 NR6A1Q15406 480 aa10.91□□□□□ -0.66
SNHG1-205ENST00000537869 SCUBE3Q8IX30 993 aa10.91□□□□□ -0.66
SNHG1-205ENST00000537869 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
SNHG1-205ENST00000537869 GLMNQ92990 594 aa10.9□□□□□ -0.66
SNHG1-205ENST00000537869 DESI1Q6ICB0 168 aa10.89□□□□□ -0.67
SNHG1-205ENST00000537869 USB1Q9BQ65 265 aaKnown RBP10.89□□□□□ -0.67
SNHG1-205ENST00000537869 WASHC4Q2M389 1173 aa10.88□□□□□ -0.67
SNHG1-205ENST00000537869 HDGFL1Q5TGJ6 251 aa10.88□□□□□ -0.67
SNHG1-205ENST00000537869 LYPD8Q6UX82 237 aa10.88□□□□□ -0.67
SNHG1-205ENST00000537869 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
SNHG1-205ENST00000537869 VAC14Q08AM6 782 aa10.87□□□□□ -0.67
SNHG1-205ENST00000537869 ADAMTS19Q8TE59 1207 aa10.87□□□□□ -0.67
SNHG1-205ENST00000537869 THAP11Q96EK4 314 aa10.87□□□□□ -0.67
SNHG1-205ENST00000537869 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
SNHG1-205ENST00000537869 SALL2Q9Y467 1007 aaPredicted RBP10.87□□□□□ -0.67
SNHG1-205ENST00000537869 NR1I2O75469 434 aa10.85□□□□□ -0.67
SNHG1-205ENST00000537869 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
SNHG1-205ENST00000537869 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
SNHG1-205ENST00000537869 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
SNHG1-205ENST00000537869 ALG2Q9H553 416 aa10.81□□□□□ -0.68
SNHG1-205ENST00000537869 THSD4Q6ZMP0 1018 aa10.8□□□□□ -0.68
SNHG1-205ENST00000537869 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
SNHG1-205ENST00000537869 JUNDP17535 347 aa10.79□□□□□ -0.68
SNHG1-205ENST00000537869 COPS2P61201 443 aa10.79□□□□□ -0.68
SNHG1-205ENST00000537869 F12P00748 615 aaPredicted RBP10.78□□□□□ -0.68
SNHG1-205ENST00000537869 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
SNHG1-205ENST00000537869 FAM160A2Q8N612 972 aaPredicted RBP10.78□□□□□ -0.68
SNHG1-205ENST00000537869 KCTD12Q96CX2 325 aaKnown RBP10.78□□□□□ -0.68
SNHG1-205ENST00000537869 PTPRNQ16849 979 aa10.77□□□□□ -0.69
SNHG1-205ENST00000537869 SPSB2Q99619 263 aa10.77□□□□□ -0.69
SNHG1-205ENST00000537869 MAP10Q9P2G4 905 aa10.77□□□□□ -0.69
SNHG1-205ENST00000537869 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
SNHG1-205ENST00000537869 MSS51Q4VC12 460 aa10.75□□□□□ -0.69
SNHG1-205ENST00000537869 FKBPLQ9UIM3 349 aa10.75□□□□□ -0.69
SNHG1-205ENST00000537869 POTEMA6NI47 508 aa10.74□□□□□ -0.69
SNHG1-205ENST00000537869 RFX1P22670 979 aa10.74□□□□□ -0.69
SNHG1-205ENST00000537869 CTHP32929 405 aa10.74□□□□□ -0.69
SNHG1-205ENST00000537869 SOX11P35716 441 aa10.74□□□□□ -0.69
SNHG1-205ENST00000537869 PPP1R12CQ9BZL4 782 aa10.74□□□□□ -0.69
SNHG1-205ENST00000537869 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
SNHG1-205ENST00000537869 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
SNHG1-205ENST00000537869 FBXO45P0C2W1 286 aa10.73□□□□□ -0.69
SNHG1-205ENST00000537869 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
SNHG1-205ENST00000537869 CFAP70Q5T0N1 1121 aa10.73□□□□□ -0.69
SNHG1-205ENST00000537869 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
SNHG1-205ENST00000537869 MMP16P51512 607 aa10.72□□□□□ -0.69
SNHG1-205ENST00000537869 NR1H3Q13133 447 aa10.72□□□□□ -0.69
SNHG1-205ENST00000537869 UCN2Q96RP3 112 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms