RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SBNO2Q9Y2G9 1366 aa15.71■□□□□ 0.11
CPSF7-218ENST00000537641 PDE3AQ14432 1141 aa15.71■□□□□ 0.1
CPSF7-218ENST00000537641 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
CPSF7-218ENST00000537641 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
CPSF7-218ENST00000537641 RPGRIP1LQ68CZ1 1315 aa15.7■□□□□ 0.1
CPSF7-218ENST00000537641 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
CPSF7-218ENST00000537641 POLR3AO14802 1390 aaPredicted RBP15.7■□□□□ 0.1
CPSF7-218ENST00000537641 ARHGAP31Q2M1Z3 1444 aa15.69■□□□□ 0.1
CPSF7-218ENST00000537641 RAPGEF3O95398 923 aa15.69■□□□□ 0.1
CPSF7-218ENST00000537641 QRICH2Q9H0J4 1663 aa15.68■□□□□ 0.1
CPSF7-218ENST00000537641 RGS3P49796 1198 aa15.68■□□□□ 0.1
CPSF7-218ENST00000537641 AAMPQ13685 434 aa15.68■□□□□ 0.1
CPSF7-218ENST00000537641 FRAT1Q92837 279 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-218ENST00000537641 USP32Q8NFA0 1604 aa15.68■□□□□ 0.1
CPSF7-218ENST00000537641 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
CPSF7-218ENST00000537641 APAF1O14727 1248 aa15.67■□□□□ 0.1
CPSF7-218ENST00000537641 SLC4A3P48751 1232 aa15.67■□□□□ 0.1
CPSF7-218ENST00000537641 RIMBP3CA6NJZ7 1639 aa15.66■□□□□ 0.1
CPSF7-218ENST00000537641 RIMBP3BA6NNM3 1639 aa15.66■□□□□ 0.1
CPSF7-218ENST00000537641 RIMBP3Q9UFD9 1639 aa15.66■□□□□ 0.1
CPSF7-218ENST00000537641 CCDC146Q8IYE0 955 aa15.66■□□□□ 0.1
CPSF7-218ENST00000537641 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
CPSF7-218ENST00000537641 SPINK5Q9NQ38 1064 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-218ENST00000537641 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
CPSF7-218ENST00000537641 CENPJQ9HC77 1338 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-218ENST00000537641 DIP2BQ9P265 1576 aa15.64■□□□□ 0.09
CPSF7-218ENST00000537641 NEXMIFQ5QGS0 1516 aa15.64■□□□□ 0.09
CPSF7-218ENST00000537641 C14orf93Q9H972 538 aaKnown RBP15.64■□□□□ 0.09
CPSF7-218ENST00000537641 PREX1Q8TCU6 1659 aa15.64■□□□□ 0.09
CPSF7-218ENST00000537641 NLRP1Q9C000 1473 aa15.63■□□□□ 0.09
CPSF7-218ENST00000537641 YEATS2Q9ULM3 1422 aa15.63■□□□□ 0.09
CPSF7-218ENST00000537641 USP19O94966 1318 aa15.63■□□□□ 0.09
CPSF7-218ENST00000537641 BCAR3O75815 825 aa15.63■□□□□ 0.09
CPSF7-218ENST00000537641 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
CPSF7-218ENST00000537641 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
CPSF7-218ENST00000537641 BRPF3Q9ULD4 1205 aa15.63■□□□□ 0.09
CPSF7-218ENST00000537641 BECN1Q14457 450 aa15.62■□□□□ 0.09
CPSF7-218ENST00000537641 ANO8Q9HCE9 1232 aaPredicted RBP15.62■□□□□ 0.09
CPSF7-218ENST00000537641 ARHGEF28Q8N1W1 1705 aaKnown RBP15.61■□□□□ 0.09
CPSF7-218ENST00000537641 MYO5BQ9ULV0 1848 aa15.61■□□□□ 0.09
CPSF7-218ENST00000537641 FRAT2O75474 233 aaPredicted RBP15.6■□□□□ 0.09
CPSF7-218ENST00000537641 IGHDP01880 384 aa15.6■□□□□ 0.09
CPSF7-218ENST00000537641 PMFBP1Q8TBY8 1022 aa15.6■□□□□ 0.09
CPSF7-218ENST00000537641 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
CPSF7-218ENST00000537641 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
CPSF7-218ENST00000537641 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
CPSF7-218ENST00000537641 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
CPSF7-218ENST00000537641 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
CPSF7-218ENST00000537641 ZFYVE9O95405 1425 aa15.59■□□□□ 0.09
CPSF7-218ENST00000537641 VGFO15240 615 aaPredicted RBP15.58■□□□□ 0.08
CPSF7-218ENST00000537641 CARD14Q9BXL6 1004 aa15.58■□□□□ 0.08
CPSF7-218ENST00000537641 TMEM131LA2VDJ0 1609 aa15.58■□□□□ 0.08
CPSF7-218ENST00000537641 TSPOAP1O95153 1857 aa15.58■□□□□ 0.08
CPSF7-218ENST00000537641 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
CPSF7-218ENST00000537641 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
CPSF7-218ENST00000537641 NSD3Q9BZ95 1437 aa15.56■□□□□ 0.08
CPSF7-218ENST00000537641 RUNDC1Q96C34 613 aa15.56■□□□□ 0.08
CPSF7-218ENST00000537641 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
CPSF7-218ENST00000537641 TRAK1Q9UPV9 953 aa15.56■□□□□ 0.08
CPSF7-218ENST00000537641 ADGRB2O60241 1585 aa15.56■□□□□ 0.08
CPSF7-218ENST00000537641 WDR63Q8IWG1 891 aa15.55■□□□□ 0.08
CPSF7-218ENST00000537641 COG6Q9Y2V7 657 aa15.55■□□□□ 0.08
CPSF7-218ENST00000537641 CCDC27Q2M243 656 aa15.54■□□□□ 0.08
CPSF7-218ENST00000537641 FAM43AQ8N2R8 423 aa15.54■□□□□ 0.08
CPSF7-218ENST00000537641 AGLP35573 1532 aa15.54■□□□□ 0.08
CPSF7-218ENST00000537641 RARSP54136 660 aaKnown RBP15.54■□□□□ 0.08
CPSF7-218ENST00000537641 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
CPSF7-218ENST00000537641 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
CPSF7-218ENST00000537641 UPF2Q9HAU5 1272 aaKnown RBP15.54■□□□□ 0.08
CPSF7-218ENST00000537641 IDI1Q13907 227 aa15.53■□□□□ 0.08
CPSF7-218ENST00000537641 PUS7Q96PZ0 661 aaKnown RBP15.53■□□□□ 0.08
CPSF7-218ENST00000537641 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.08
CPSF7-218ENST00000537641 PRKCSHP14314 528 aaPredicted RBP15.51■□□□□ 0.07
CPSF7-218ENST00000537641 TULP4Q9NRJ4 1543 aa15.51■□□□□ 0.07
CPSF7-218ENST00000537641 L1TD1Q5T7N2 865 aaKnown RBP15.51■□□□□ 0.07
CPSF7-218ENST00000537641 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
CPSF7-218ENST00000537641 NSD2O96028 1365 aa15.5■□□□□ 0.07
CPSF7-218ENST00000537641 SEC24BO95487 1268 aa15.5■□□□□ 0.07
CPSF7-218ENST00000537641 TBC1D32Q96NH3 1257 aa15.5■□□□□ 0.07
CPSF7-218ENST00000537641 RWDD1Q9H446 243 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-218ENST00000537641 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
CPSF7-218ENST00000537641 EVC2Q86UK5 1308 aa15.49■□□□□ 0.07
CPSF7-218ENST00000537641 CLTCQ00610 1675 aaKnown RBP15.49■□□□□ 0.07
CPSF7-218ENST00000537641 ANTXR1Q9H6X2 564 aa15.48■□□□□ 0.07
CPSF7-218ENST00000537641 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
CPSF7-218ENST00000537641 TCP11L2Q8N4U5 519 aa15.48■□□□□ 0.07
CPSF7-218ENST00000537641 CFAP53Q96M91 514 aa15.48■□□□□ 0.07
CPSF7-218ENST00000537641 PDZRN3Q9UPQ7 1066 aa15.48■□□□□ 0.07
CPSF7-218ENST00000537641 MYH16Q9H6N6 1097 aa15.47■□□□□ 0.07
CPSF7-218ENST00000537641 NUTM2DQ5VT03 806 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-218ENST00000537641 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
CPSF7-218ENST00000537641 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
CPSF7-218ENST00000537641 SPATA31D1Q6ZQQ2 1576 aa15.45■□□□□ 0.06
CPSF7-218ENST00000537641 ARHGEF40Q8TER5 1519 aa15.45■□□□□ 0.06
CPSF7-218ENST00000537641 PTPRMP28827 1452 aa15.45■□□□□ 0.06
CPSF7-218ENST00000537641 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
CPSF7-218ENST00000537641 SLC12A5Q9H2X9 1139 aa15.45■□□□□ 0.06
CPSF7-218ENST00000537641 POGKQ9P215 609 aa15.45■□□□□ 0.06
CPSF7-218ENST00000537641 ANKRD26Q9UPS8 1709 aa15.44■□□□□ 0.06
CPSF7-218ENST00000537641 RLBP1P12271 317 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms